Re: .nd2 -> .tif conversion issue (#2)
Posted:
Mon Jan 16, 2017 11:18 pm
by user
Great, glad to hear you located the root cause. For my recent uses of the command, I have been specifying "-series", "-channel", and "-timepoint" options to `bfconvert`, but not "-z". Looking forward to your upcoming patch.
Re: .nd2 -> .tif conversion issue (#2)
Posted:
Fri Feb 03, 2017 4:29 pm
by dgault
To follow up this conversion issue, the bug fix to prevent the initial IllegalArgumentException when using bfconvert has been included in the latest Bio-Formats release (version 5.3.3).
You can find it available at
http://downloads.openmicroscopy.org/bio-formats/5.3.3/A full list of changes included in this release can be found at
http://www.openmicroscopy.org/site/supp ... s-new.htmlWith Thanks,
David Gault
Re: .nd2 -> .tif conversion issue (#2)
Posted:
Fri Feb 03, 2017 7:20 pm
by user
I'm very glad to hear that. Thanks for fixing it.