Re: testing new reader
Posted: Thu Jun 21, 2018 11:15 am
Thanks so the last command should add the ISQReader JAR to the command-line classpath. It still failed because by default, it still uses the internal ImageReader (which does not include your reader). Now, let's try to add the -format option suggested by David allowing to force your new ISQReader to be used instead:
Sebastien
- Code: Select all
BF_CP=/Users/Hedwall/bioformats/tools/ISQReader.jar /Users/Hedwall/bioformats/tools/showinf -format ISQ -nopix /Users/Hedwall/Desktop/C0003094.ISQ | grep initializing
Sebastien