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JSON Files for Screens?

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JSON Files for Screens?

Postby DavidEgan » Fri Jul 20, 2018 2:57 pm

Guys,
In the past I found JSON files for a screen that had all the well IDs listed but I can't find something similar for idr0016-wawer-bioactivecompoundprofiling/screenA How can get the Well Ids so that I can build the web link to direct someone to the image browser for that in IDR. I know what the link looks like https://idr.openmicroscopy.org/webclien ... ll-1342122
Thanks,
D
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Re: JSON Files for Screens?

Postby jmoore » Fri Aug 03, 2018 11:24 am

Hi David,

sorry for the slow response; just getting back from vacation. Are you maybe thinking about the example from https://github.com/IDR/idr-notebooks/blob/master/IDR_API_example_script.ipynb? There are JSON endpoints to find the plates per screen and then from there to find all the wells.

All the best,
~Josh
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Re: JSON Files for Screens?

Postby DavidEgan » Fri Aug 03, 2018 12:44 pm

Jason,
No problem, it's my last day here before vacation. Thanks a lot, I can see how we can build the scripts to get out the information. I'll have a look at it with my colleague Wienand when I get back.
Regards,
David
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