Open Microscopy Environment

Posted: **Thu Jan 31, 2019 4:45 pm**

Hi,
I am looking for a way to access the stage coordinate (x, y, z) in Matlab.
Would anyone know the syntax one should use?
Thank ou for your help!

Posted: **Fri Feb 01, 2019 10:28 am**

You might be able to access that via the Image.StageLabel, see http://downloads.openmicroscopy.org/ome ... ageLabel-- or the Pixels.PlaneInfo see https://downloads.openmicroscopy.org/om ... laneInfo-- (positionX, positionY, positionZ). The StageLabel is not always populated, depends on the image format / reader.

Kind Regards,
Dominik

Getting stage coordinates for non-SPW images in MATLAB