Attending: Petr, Josh, J-m, Frances, Mark, June, David, Dom, Seb, Simon, Jason,
Liza, Will, Melissa, Wilma, Chris, Emil, Andreas
Start: 2:00 pm
(2-3 minutes each)
Simon: Working on a second production deployment
If starts OK, will look at network swap
napari from s3.
Zarr in minio: format, etc.
bioformats2raw: layouts, etc.
Seb: remember to record the demo.
opening with raw TIFFs with Pillow, zarr, h5 etc.
We have a final GPFS quote
VMWare licenses still valid for 11 months
We need somewhere to document licenses and renewal dates
Issues with incomplete tiles/padding
Fixes and release unlikely in the short term
Will set up our own n5-zarr repo with SNAPSHOT builds
Bio-Formats fixes from 5.6.1 feedback
om.org website updated
Speakers contacted re:video recordings
Trial run– BioImagingUK mtg this week, breakouts next week
Deciding on video hosting soon.
This week: Schedule recording of talks
Today - test meeting
Strategy docs for breakout sessions
Workshops - prepare our own from training workshops
What is goal of demo?
Want to get consistent measure of performance.
JM: can demo loading of zarr/zip/tar from file-ann on Image
Simon: demo napari loading from minio.
Jason: we have Windows remote desktop available
Chris: who has best bandwidth connectivity?
Chris: I can run locally, if Will gives me instructions.
Can we run on Windows?
JM: which files to use - idr0062
Seb: idr0044 2k x 2k x 1k…etc.
Josh: converting using Docker running on server.
Will: Using nested chunks?
Josh: Seeing RecursionError when loading over s3.
Seb: maybe 1 million chunks in idr0044
(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)
(20-25 minutes plus 15 minutes questions max)