OMERO

OMERO Apps

Extend the functionality of OMERO with web or command-line apps

Web apps

OMERO.web apps add new tools that can be accessed from the OMERO.webclient or embedded in the webclient itself.
Apps must be installed by the sysadmin on the OMERO.web server.

OMERO.figure

A tool for quickly creating high-quality figures without needing to export images from OMERO.

OMERO.figure

OMERO.fpbioimage

A volumetric web-based image viewer.

OMERO.fpbioimage

OMERO.gallery

Simple Project, Dataset and Image browsing, suitable for public data.

OMERO.gallery

OMERO.iviewer

A multi-dimensional image viewer with support for tile-based images, ROI editing and side-by-side image comparisons.

OMERO.iviewer

OMERO.mapr

Browse your images via Key-Value pairs.

OMERO.mapr

OMERO.parade

Filter and plot images by analysis results or other metadata.

OMERO.parade

Command-line plugins

The OMERO command line is a powerful tool that can be extended with plugins to perform a range of tasks.

OMERO-cli-render

Update rendering settings on a large number of images.

omero-cli-render

OMERO-metadata

Convert tabular data from CSV files to OMERO.tables.

omero-metadata

OMERO-cli-duplicate

Duplicate Objects in OMERO, without duplicating binary data.

omero-cli-duplicate
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