ome-xml  5.6.0
Experiment.h
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38 
39 /*─────────────────────────────────────────────────────────────────────────────
40  *
41  * THIS IS AUTOMATICALLY GENERATED CODE. DO NOT MODIFY.
42  *
43  *─────────────────────────────────────────────────────────────────────────────
44  */
45 
46 #ifndef OME_XML_MODEL_EXPERIMENT_H
47 #define OME_XML_MODEL_EXPERIMENT_H
48 
49 #include <algorithm>
50 #include <list>
51 #include <stdexcept>
52 #include <string>
53 #include <vector>
54 
55 #include <ome/common/log.h>
56 
57 #include <ome/common/xml/dom/Document.h>
58 #include <ome/common/xml/dom/Element.h>
59 #include <ome/common/xml/dom/Node.h>
60 
61 #include <ome/xml/model/primitives/Quantity.h>
62 
63 #include <ome/xml/model/Experimenter.h>
64 #include <ome/xml/model/detail/OMEModelObject.h>
65 #include <ome/xml/model/enums/ExperimentType.h>
66 
67 namespace ome
68 {
69  namespace xml
70  {
71  namespace model
72  {
73 
74  // Forward declarations.
75  class Image;
76  class MicrobeamManipulation;
77  class OMEModel;
78 
83  {
84  private:
85  class Impl;
87  std::shared_ptr<Impl> impl;
88 
89  public:
91  Experiment();
92 
98  Experiment (const Experiment& copy);
99 
101  virtual
102  ~Experiment ();
103 
118  static std::shared_ptr<Experiment>
119  create(const common::xml::dom::Element& element,
121 
122  // Documented in superclass.
123  const std::string&
124  elementName() const;
125 
126  // Documented in superclass.
127  bool
128  validElementName(const std::string& name) const;
129 
131  Experiment&
132  operator= (const Experiment&) = delete;
134 
135  // -- OMEModelObject API methods --
136 
138  virtual void
139  update(const common::xml::dom::Element& element,
141 
142  public:
143  // -- Experiment API methods --
144 
146  bool
147  link (std::shared_ptr<Reference>& reference,
148  std::shared_ptr<ome::xml::model::OMEModelObject>& object);
149 
155  std::shared_ptr<ome::xml::model::enums::ExperimentType>
156  getType ();
157 
163  const std::shared_ptr<ome::xml::model::enums::ExperimentType>
164  getType () const;
165 
171  void
172  setType (std::shared_ptr<ome::xml::model::enums::ExperimentType>& type);
173 
179  const std::string&
180  getID () const;
181 
187  void
188  setID (const std::string& id);
189 
195  std::shared_ptr<std::string>
196  getDescription ();
197 
203  const std::shared_ptr<std::string>
204  getDescription () const;
205 
211  void
212  setDescription (std::shared_ptr<std::string>& description);
213 
220  std::weak_ptr<ome::xml::model::Experimenter>
222 
229  const std::weak_ptr<ome::xml::model::Experimenter>
230  getLinkedExperimenter () const;
231 
237  void
238  linkExperimenter (std::shared_ptr<ome::xml::model::Experimenter>& experimenter);
239 
249  void
250  unlinkExperimenter (std::shared_ptr<ome::xml::model::Experimenter>& experimenter);
251 
257  std::vector<std::shared_ptr<ome::xml::model::MicrobeamManipulation>>::size_type
259 
266  std::vector<std::shared_ptr<ome::xml::model::MicrobeamManipulation>>&
268 
275  const std::vector<std::shared_ptr<ome::xml::model::MicrobeamManipulation>>&
277 
285  std::shared_ptr<ome::xml::model::MicrobeamManipulation>&
286  getMicrobeamManipulation (std::vector<std::shared_ptr<ome::xml::model::MicrobeamManipulation>>::size_type index);
287 
295  const std::shared_ptr<ome::xml::model::MicrobeamManipulation>&
296  getMicrobeamManipulation (std::vector<std::shared_ptr<ome::xml::model::MicrobeamManipulation>>::size_type index) const;
297 
305  void
306  setMicrobeamManipulation (std::vector<std::shared_ptr<ome::xml::model::MicrobeamManipulation>>::size_type index,
307  std::shared_ptr<ome::xml::model::MicrobeamManipulation>& microbeamManipulation);
308 
317  void
318  addMicrobeamManipulation (std::shared_ptr<ome::xml::model::MicrobeamManipulation>& microbeamManipulation);
319 
329  void
330  removeMicrobeamManipulation (std::shared_ptr<ome::xml::model::MicrobeamManipulation>& microbeamManipulation);
331 
338  sizeOfLinkedImageList () const;
339 
346  getLinkedImageList () const;
347 
355  const std::weak_ptr<ome::xml::model::Image>&
357 
368  const std::weak_ptr<ome::xml::model::Image>&
370  const std::shared_ptr<ome::xml::model::Image>& image_BackReference);
371 
382  bool
383  linkImage (const std::shared_ptr<ome::xml::model::Image>& image_BackReference);
384 
400  bool
401  unlinkImage (const std::shared_ptr<ome::xml::model::Image>& image_BackReference);
402 
403  protected:
404  // Documented in base class.
405  virtual void
407  common::xml::dom::Element& element) const;
408 
409  public:
410  // Documented in superclass.
411  const std::string&
412  getXMLNamespace() const;
413  };
414 
415  }
416  }
417 }
418 
419 #endif // OME_XML_MODEL_EXPERIMENT_H
420 
421 /*
422  * Local Variables:
423  * mode:C++
424  * End:
425  */
OME model interface (abstract top-level container)
Definition: OMEModel.h:61
std::vector< std::shared_ptr< ome::xml::model::MicrobeamManipulation > > & getMicrobeamManipulationList()
Get the MicrobeamManipulation list.
Definition: Experiment.cpp:392
void setDescription(std::shared_ptr< std::string > &description)
Set the Description property.
Definition: Experiment.cpp:350
std::shared_ptr< ome::xml::model::enums::ExperimentType > getType()
Get the Type property.
Definition: Experiment.cpp:301
virtual SKIP void update(const common::xml::dom::Element &element, ome::xml::model::OMEModel &model)
Update the object hierarchy recursively from an XML DOM tree.
Definition: Experiment.cpp:205
const std::string & getID() const
Get the ID property.
Definition: Experiment.cpp:322
std::weak_ptr< ome::xml::model::Experimenter > getLinkedExperimenter()
Get linked Experimenter.
Definition: Experiment.cpp:357
bool link(std::shared_ptr< Reference > &reference, std::shared_ptr< ome::xml::model::OMEModelObject > &object)
Link a given OME model object to this model object.
Definition: Experiment.cpp:275
const std::string & getXMLNamespace() const
Get the XML namespace for this model object.
Definition: Experiment.cpp:576
boost::multi_index_container< Ptr< T >, boost::multi_index::indexed_by< boost::multi_index::random_access<>, boost::multi_index::ordered_unique< boost::multi_index::identity< Ptr< T > >, std::owner_less< Ptr< T > > > > > type
Multi-index container type.
Definition: OMEModelObject.h:93
const std::weak_ptr< ome::xml::model::Image > & setLinkedImage(OMEModelObject::indexed_container< ome::xml::model::Image, std::weak_ptr >::type::size_type index, const std::shared_ptr< ome::xml::model::Image > &image_BackReference)
Set linked Image.
Definition: Experiment.cpp:462
OME model object (concrete implementation).
Definition: OMEModelObject.h:64
void addMicrobeamManipulation(std::shared_ptr< ome::xml::model::MicrobeamManipulation > &microbeamManipulation)
Add MicrobeamManipulation.
Definition: Experiment.cpp:425
Experiment model object.
Definition: Experiment.h:82
Multi-index container for efficient ordered insertion and deletion of model object references...
Definition: OMEModelObject.h:84
bool linkImage(const std::shared_ptr< ome::xml::model::Image > &image_BackReference)
Link Image.
Definition: Experiment.cpp:472
void setID(const std::string &id)
Set the ID property.
Definition: Experiment.cpp:329
void setType(std::shared_ptr< ome::xml::model::enums::ExperimentType > &type)
Set the Type property.
Definition: Experiment.cpp:315
Open Microscopy Environment C++ implementation.
Private implementation details of Experiment model object.
Definition: Experiment.cpp:81
const std::weak_ptr< ome::xml::model::Image > & getLinkedImage(OMEModelObject::indexed_container< ome::xml::model::Image, std::weak_ptr >::type::size_type index) const
Get linked Image.
Definition: Experiment.cpp:456
void unlinkExperimenter(std::shared_ptr< ome::xml::model::Experimenter > &experimenter)
Unlink Experimenter.
Definition: Experiment.cpp:376
void setMicrobeamManipulation(std::vector< std::shared_ptr< ome::xml::model::MicrobeamManipulation >>::size_type index, std::shared_ptr< ome::xml::model::MicrobeamManipulation > &microbeamManipulation)
Set MicrobeamManipulation.
Definition: Experiment.cpp:416
bool unlinkImage(const std::shared_ptr< ome::xml::model::Image > &image_BackReference)
Unlink Image.
Definition: Experiment.cpp:485
std::shared_ptr< std::string > getDescription()
Get the Description property.
Definition: Experiment.cpp:336
Experiment()
Default constructor.
Definition: Experiment.cpp:159
static std::shared_ptr< Experiment > create(const common::xml::dom::Element &element, ome::xml::model::OMEModel &model)
Create a Experiment model object from DOM element.
Definition: Experiment.cpp:183
bool validElementName(const std::string &name) const
Check if a given element name is valid for processing by this model object.
Definition: Experiment.cpp:199
OMEModelObject::indexed_container< ome::xml::model::Image, std::weak_ptr >::type::size_type sizeOfLinkedImageList() const
Get size of linked Image list.
Definition: Experiment.cpp:444
virtual ~Experiment()
Destructor.
Definition: Experiment.cpp:178
std::shared_ptr< Impl > impl
Private implementation details.
Definition: Experiment.h:85
void removeMicrobeamManipulation(std::shared_ptr< ome::xml::model::MicrobeamManipulation > &microbeamManipulation)
Remove MicrobeamManipulation.
Definition: Experiment.cpp:433
OMEModelObject::indexed_container< ome::xml::model::Image, std::weak_ptr >::type getLinkedImageList() const
Get the linked Image list.
Definition: Experiment.cpp:450
void linkExperimenter(std::shared_ptr< ome::xml::model::Experimenter > &experimenter)
Link Experimenter.
Definition: Experiment.cpp:370
std::vector< std::shared_ptr< ome::xml::model::MicrobeamManipulation > >::size_type sizeOfMicrobeamManipulationList() const
Get size of linked MicrobeamManipulation list.
Definition: Experiment.cpp:386
virtual void asXMLElementInternal(common::xml::dom::Document &document, common::xml::dom::Element &element) const
Transform the object hierarchy rooted at this element to XML.
Definition: Experiment.cpp:501
std::shared_ptr< ome::xml::model::MicrobeamManipulation > & getMicrobeamManipulation(std::vector< std::shared_ptr< ome::xml::model::MicrobeamManipulation >>::size_type index)
Get MicrobeamManipulation.
Definition: Experiment.cpp:404
const std::string & elementName() const
Get the element name of this model object.
Definition: Experiment.cpp:192