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Feature List

New features in OMERO 4.3.2 and OMERO 4.3.3

Run scripts from web
OMERO.web now supports running of scripts and browsing or download of script results from your browser.
OMERO Virtual machine
If you want to run the OMERO server without doing a full install, you can now get OMERO all ready set-up in a VM.
HCS data improved in web
The OMERO.web client has been updated to improve access to HCS data from your favourite browser.
Volume viewer in web
In collaboration with the EMDB at EBI, we have integrated a 3D solid model viewer into the web client.

OMERO Features

Import | Organise | Metadata | View | Analysis | Export | Utility functions | All Features By Release

Import

Import images
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Import images from microscope, graphics and other imaging formats, using the OMERO.insight client or the stand-alone OMERO.importer.
File Formats
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OMERO imports all the formats read by Bio-Formats including microscopy, HCS, tissue scanner and graphics file formats. Over 120 in total.
DropBox
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Full-fledged "DropBox" — allows automatic import from a defined directory of all supported file formats.
Command Line Import
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Use the command line to import images into OMERO

Organise

Manage and organise
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Manage, organise and delete images within Projects and Datasets.
Browse & View Images
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Browse and View Images remotely on cross-platform software.
Permissions
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OMERO permissions functionality allows users to share data within groups of scientists and collaborate on their data. More Info.
Annotate Data
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Annotate your data with descriptions, comments, file attachments, tags or rating.
Share
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Share sets of images with other users and have a conversation about the data.

Metadata

Metadata
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Browse image acquisition metadata in OMERO.insight and OMERO.web.
Add Experiment Info
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Edit Protocol and Experiment files and use these to annotate your data.

View

View Images
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Browse thumbnails, Image previews and open a Full image viewer in OMERO.web and OMERO.insight. Includes 'split-channel' view and Z-projection.
Big Images
OMERO supports large images, with infrastructure and viewers to support panning and zooming

Analyse

Draw ROIs
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Draw ROIs across multiple dimensions and measure pixel intensity.
Scripting Service
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Write Python scripts to add functionality to the OMERO.server. Writing Scripts
Python Blitz API
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The Python 'Blitz' Gateway provides an easy-to-use API for OMERO making it easier to work with your data in Python. More Info.
Image Processing
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The Scripting Service can be used to add image processing and analysis functionality to the OMERO server.
Tabular Data support
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HDF-based storage of measurement results with an API for exporting to Excel.

Export

Figure Export
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Export your data as figures for presentation. See this page for examples and more info.
Export Images
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Export whole Images as OME-TIFFs or individual snapshots as JPEGs.
Export to ImageJ
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Export any image as OME-TIFF or connect to OMERO with the ImageJ plugin to open images in ImageJ

Utility

Manage users & groups
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Server administrators can add and manage users and groups with the admin tools.
Delete
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New asynchronous Delete infrastructure with much improved performance and lower memory requirements.
Command Line
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Many OMERO functions can be accessed from the command line, as demonstrated in these movies (also see Import above).
Quality Assurance
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Feedback system that allows users to send comments, bugs, or data files, and to track responses and updates.
Demo server
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Take the advantage of OMERO platform and ask for a free Demo Account here.
LDAP support
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The Lightweight Directory Access Protocol (LDAP) support.
Personalise
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Edit your account details and upload your photo to personalise your account.
Feedback & support
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Documentation and user support on forum and mailing lists.
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