2017-12-06 15:26:55,928 INFO  [                ome.services.blitz.Entry] (      main) Creating OMERO.blitz. Please wait...
2017-12-06 15:26:56,939 INFO  [.s.ShutdownSafeEhcacheManagerFactoryBean] (      main) Initializing EHCache CacheManager
2017-12-06 15:26:57,414 ERROR [          ome.services.util.DBPatchCheck] (      main) 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

2017-12-06 15:26:57,415 INFO  [.s.ShutdownSafeEhcacheManagerFactoryBean] (      main) Shutting down EHCache CacheManager
2017-12-06 15:26:57,421 ERROR [                ome.services.blitz.Entry] (      main) Error on startup.
org.springframework.beans.factory.access.BootstrapException: Unable to return specified BeanFactory instance: factory key [OMERO.blitz], from group with resource name [classpath*:beanRefContext.xml]; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'OMERO.blitz' defined in URL [jar:file:/home/omero/OMERO.server-5.4.1-ice36-b75/lib/server/blitz.jar!/beanRefContext.xml]: Cannot resolve reference to bean 'ome.server' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'ome.server' defined in URL [jar:file:/home/omero/OMERO.server-5.4.1-ice36-b75/lib/server/server.jar!/beanRefContext.xml]: Instantiation of bean failed; nested exception is org.springframework.beans.BeanInstantiationException: Could not instantiate bean class [ome.system.OmeroContext]: Constructor threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'currentDetails' defined in class path resource [ome/services/sec-primitives.xml]: Cannot resolve reference to bean 'roles' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.factory.access.SingletonBeanFactoryLocator.useBeanFactory(SingletonBeanFactoryLocator.java:409) ~[spring-beans.jar:3.0.1.RELEASE]
	at ome.system.OmeroContext.getInstance(OmeroContext.java:202) ~[common.jar:na]
	at ome.services.blitz.Entry.start(Entry.java:189) [blitz.jar:na]
	at ome.services.blitz.Entry.main(Entry.java:146) [blitz.jar:na]
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'OMERO.blitz' defined in URL [jar:file:/home/omero/OMERO.server-5.4.1-ice36-b75/lib/server/blitz.jar!/beanRefContext.xml]: Cannot resolve reference to bean 'ome.server' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'ome.server' defined in URL [jar:file:/home/omero/OMERO.server-5.4.1-ice36-b75/lib/server/server.jar!/beanRefContext.xml]: Instantiation of bean failed; nested exception is org.springframework.beans.BeanInstantiationException: Could not instantiate bean class [ome.system.OmeroContext]: Constructor threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'currentDetails' defined in class path resource [ome/services/sec-primitives.xml]: Cannot resolve reference to bean 'roles' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:328) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:106) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.resolveConstructorArguments(ConstructorResolver.java:586) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:140) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.autowireConstructor(AbstractAutowireCapableBeanFactory.java:984) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:888) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:479) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:450) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:290) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:287) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:193) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1048) ~[spring-context.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.access.SingletonBeanFactoryLocator.useBeanFactory(SingletonBeanFactoryLocator.java:397) ~[spring-beans.jar:3.0.1.RELEASE]
	... 3 common frames omitted
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'ome.server' defined in URL [jar:file:/home/omero/OMERO.server-5.4.1-ice36-b75/lib/server/server.jar!/beanRefContext.xml]: Instantiation of bean failed; nested exception is org.springframework.beans.BeanInstantiationException: Could not instantiate bean class [ome.system.OmeroContext]: Constructor threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'currentDetails' defined in class path resource [ome/services/sec-primitives.xml]: Cannot resolve reference to bean 'roles' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:281) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.autowireConstructor(AbstractAutowireCapableBeanFactory.java:984) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:888) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:479) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:450) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:290) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:287) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:189) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:322) ~[spring-beans.jar:3.0.1.RELEASE]
	... 16 common frames omitted
Caused by: org.springframework.beans.BeanInstantiationException: Could not instantiate bean class [ome.system.OmeroContext]: Constructor threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'currentDetails' defined in class path resource [ome/services/sec-primitives.xml]: Cannot resolve reference to bean 'roles' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:141) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:107) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:273) ~[spring-beans.jar:3.0.1.RELEASE]
	... 25 common frames omitted
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'currentDetails' defined in class path resource [ome/services/sec-primitives.xml]: Cannot resolve reference to bean 'roles' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:328) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:106) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.resolveConstructorArguments(ConstructorResolver.java:600) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:140) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.autowireConstructor(AbstractAutowireCapableBeanFactory.java:984) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:888) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:479) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:450) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:290) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:287) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:189) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:562) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:871) ~[spring-context.jar:3.0.1.RELEASE]
	at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:423) ~[spring-context.jar:3.0.1.RELEASE]
	at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:139) ~[spring-context.jar:3.0.1.RELEASE]
	at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:105) ~[spring-context.jar:3.0.1.RELEASE]
	at ome.system.OmeroContext.<init>(OmeroContext.java:97) ~[common.jar:na]
	at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) ~[na:1.8.0_144]
	at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62) ~[na:1.8.0_144]
	at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) ~[na:1.8.0_144]
	at java.lang.reflect.Constructor.newInstance(Constructor.java:423) ~[na:1.8.0_144]
	at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:126) ~[spring-beans.jar:3.0.1.RELEASE]
	... 27 common frames omitted
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1403) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:513) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:450) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:290) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:287) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:189) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:280) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:189) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:344) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:964) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:870) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:479) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:450) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:290) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:287) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:189) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:322) ~[spring-beans.jar:3.0.1.RELEASE]
	... 49 common frames omitted
Caused by: ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at ome.services.util.DBPatchCheck.start(DBPatchCheck.java:71) ~[server.jar:na]
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[na:1.8.0_144]
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[na:1.8.0_144]
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_144]
	at java.lang.reflect.Method.invoke(Method.java:498) ~[na:1.8.0_144]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeCustomInitMethod(AbstractAutowireCapableBeanFactory.java:1527) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1468) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1400) ~[spring-beans.jar:3.0.1.RELEASE]
	... 67 common frames omitted
2017-12-06 15:45:27,636 INFO  [                ome.services.blitz.Entry] (      main) Creating OMERO.blitz. Please wait...
2017-12-06 15:45:29,205 INFO  [.s.ShutdownSafeEhcacheManagerFactoryBean] (      main) Initializing EHCache CacheManager
2017-12-06 15:45:30,347 ERROR [          ome.services.util.DBPatchCheck] (      main) 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

2017-12-06 15:45:30,348 INFO  [.s.ShutdownSafeEhcacheManagerFactoryBean] (      main) Shutting down EHCache CacheManager
2017-12-06 15:45:30,354 ERROR [                ome.services.blitz.Entry] (      main) Error on startup.
org.springframework.beans.factory.access.BootstrapException: Unable to return specified BeanFactory instance: factory key [OMERO.blitz], from group with resource name [classpath*:beanRefContext.xml]; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'OMERO.blitz' defined in URL [jar:file:/home/omero/OMERO.server-5.4.1-ice36-b75/lib/server/blitz.jar!/beanRefContext.xml]: Cannot resolve reference to bean 'ome.server' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'ome.server' defined in URL [jar:file:/home/omero/OMERO.server-5.4.1-ice36-b75/lib/server/server.jar!/beanRefContext.xml]: Instantiation of bean failed; nested exception is org.springframework.beans.BeanInstantiationException: Could not instantiate bean class [ome.system.OmeroContext]: Constructor threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'currentDetails' defined in class path resource [ome/services/sec-primitives.xml]: Cannot resolve reference to bean 'roles' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.factory.access.SingletonBeanFactoryLocator.useBeanFactory(SingletonBeanFactoryLocator.java:409) ~[spring-beans.jar:3.0.1.RELEASE]
	at ome.system.OmeroContext.getInstance(OmeroContext.java:202) ~[common.jar:na]
	at ome.services.blitz.Entry.start(Entry.java:189) [blitz.jar:na]
	at ome.services.blitz.Entry.main(Entry.java:146) [blitz.jar:na]
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'OMERO.blitz' defined in URL [jar:file:/home/omero/OMERO.server-5.4.1-ice36-b75/lib/server/blitz.jar!/beanRefContext.xml]: Cannot resolve reference to bean 'ome.server' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'ome.server' defined in URL [jar:file:/home/omero/OMERO.server-5.4.1-ice36-b75/lib/server/server.jar!/beanRefContext.xml]: Instantiation of bean failed; nested exception is org.springframework.beans.BeanInstantiationException: Could not instantiate bean class [ome.system.OmeroContext]: Constructor threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'currentDetails' defined in class path resource [ome/services/sec-primitives.xml]: Cannot resolve reference to bean 'roles' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:328) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:106) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.resolveConstructorArguments(ConstructorResolver.java:586) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:140) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.autowireConstructor(AbstractAutowireCapableBeanFactory.java:984) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:888) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:479) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:450) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:290) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:287) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:193) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1048) ~[spring-context.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.access.SingletonBeanFactoryLocator.useBeanFactory(SingletonBeanFactoryLocator.java:397) ~[spring-beans.jar:3.0.1.RELEASE]
	... 3 common frames omitted
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'ome.server' defined in URL [jar:file:/home/omero/OMERO.server-5.4.1-ice36-b75/lib/server/server.jar!/beanRefContext.xml]: Instantiation of bean failed; nested exception is org.springframework.beans.BeanInstantiationException: Could not instantiate bean class [ome.system.OmeroContext]: Constructor threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'currentDetails' defined in class path resource [ome/services/sec-primitives.xml]: Cannot resolve reference to bean 'roles' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:281) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.autowireConstructor(AbstractAutowireCapableBeanFactory.java:984) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:888) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:479) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:450) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:290) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:287) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:189) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:322) ~[spring-beans.jar:3.0.1.RELEASE]
	... 16 common frames omitted
Caused by: org.springframework.beans.BeanInstantiationException: Could not instantiate bean class [ome.system.OmeroContext]: Constructor threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'currentDetails' defined in class path resource [ome/services/sec-primitives.xml]: Cannot resolve reference to bean 'roles' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:141) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:107) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:273) ~[spring-beans.jar:3.0.1.RELEASE]
	... 25 common frames omitted
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'currentDetails' defined in class path resource [ome/services/sec-primitives.xml]: Cannot resolve reference to bean 'roles' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:328) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:106) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.resolveConstructorArguments(ConstructorResolver.java:600) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:140) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.autowireConstructor(AbstractAutowireCapableBeanFactory.java:984) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:888) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:479) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:450) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:290) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:287) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:189) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:562) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:871) ~[spring-context.jar:3.0.1.RELEASE]
	at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:423) ~[spring-context.jar:3.0.1.RELEASE]
	at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:139) ~[spring-context.jar:3.0.1.RELEASE]
	at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:105) ~[spring-context.jar:3.0.1.RELEASE]
	at ome.system.OmeroContext.<init>(OmeroContext.java:97) ~[common.jar:na]
	at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) ~[na:1.8.0_144]
	at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62) ~[na:1.8.0_144]
	at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) ~[na:1.8.0_144]
	at java.lang.reflect.Constructor.newInstance(Constructor.java:423) ~[na:1.8.0_144]
	at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:126) ~[spring-beans.jar:3.0.1.RELEASE]
	... 27 common frames omitted
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1403) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:513) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:450) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:290) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:287) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:189) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:280) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:189) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:344) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:964) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:870) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:479) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:450) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:290) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:287) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:189) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:322) ~[spring-beans.jar:3.0.1.RELEASE]
	... 49 common frames omitted
Caused by: ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at ome.services.util.DBPatchCheck.start(DBPatchCheck.java:71) ~[server.jar:na]
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[na:1.8.0_144]
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[na:1.8.0_144]
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_144]
	at java.lang.reflect.Method.invoke(Method.java:498) ~[na:1.8.0_144]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeCustomInitMethod(AbstractAutowireCapableBeanFactory.java:1527) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1468) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1400) ~[spring-beans.jar:3.0.1.RELEASE]
	... 67 common frames omitted
2017-12-06 17:22:23,117 INFO  [                ome.services.blitz.Entry] (      main) Creating OMERO.blitz. Please wait...
2017-12-06 17:22:24,228 INFO  [.s.ShutdownSafeEhcacheManagerFactoryBean] (      main) Initializing EHCache CacheManager
2017-12-06 17:22:24,579 ERROR [          ome.services.util.DBPatchCheck] (      main) 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

2017-12-06 17:22:24,580 INFO  [.s.ShutdownSafeEhcacheManagerFactoryBean] (      main) Shutting down EHCache CacheManager
2017-12-06 17:22:24,586 ERROR [                ome.services.blitz.Entry] (      main) Error on startup.
org.springframework.beans.factory.access.BootstrapException: Unable to return specified BeanFactory instance: factory key [OMERO.blitz], from group with resource name [classpath*:beanRefContext.xml]; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'OMERO.blitz' defined in URL [jar:file:/home/omero/OMERO.server-5.4.1-ice36-b75/lib/server/blitz.jar!/beanRefContext.xml]: Cannot resolve reference to bean 'ome.server' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'ome.server' defined in URL [jar:file:/home/omero/OMERO.server-5.4.1-ice36-b75/lib/server/server.jar!/beanRefContext.xml]: Instantiation of bean failed; nested exception is org.springframework.beans.BeanInstantiationException: Could not instantiate bean class [ome.system.OmeroContext]: Constructor threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'currentDetails' defined in class path resource [ome/services/sec-primitives.xml]: Cannot resolve reference to bean 'roles' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.factory.access.SingletonBeanFactoryLocator.useBeanFactory(SingletonBeanFactoryLocator.java:409) ~[spring-beans.jar:3.0.1.RELEASE]
	at ome.system.OmeroContext.getInstance(OmeroContext.java:202) ~[common.jar:na]
	at ome.services.blitz.Entry.start(Entry.java:189) [blitz.jar:na]
	at ome.services.blitz.Entry.main(Entry.java:146) [blitz.jar:na]
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'OMERO.blitz' defined in URL [jar:file:/home/omero/OMERO.server-5.4.1-ice36-b75/lib/server/blitz.jar!/beanRefContext.xml]: Cannot resolve reference to bean 'ome.server' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'ome.server' defined in URL [jar:file:/home/omero/OMERO.server-5.4.1-ice36-b75/lib/server/server.jar!/beanRefContext.xml]: Instantiation of bean failed; nested exception is org.springframework.beans.BeanInstantiationException: Could not instantiate bean class [ome.system.OmeroContext]: Constructor threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'currentDetails' defined in class path resource [ome/services/sec-primitives.xml]: Cannot resolve reference to bean 'roles' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:328) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:106) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.resolveConstructorArguments(ConstructorResolver.java:586) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:140) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.autowireConstructor(AbstractAutowireCapableBeanFactory.java:984) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:888) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:479) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:450) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:290) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:287) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:193) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.context.support.AbstractApplicationContext.getBean(AbstractApplicationContext.java:1048) ~[spring-context.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.access.SingletonBeanFactoryLocator.useBeanFactory(SingletonBeanFactoryLocator.java:397) ~[spring-beans.jar:3.0.1.RELEASE]
	... 3 common frames omitted
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'ome.server' defined in URL [jar:file:/home/omero/OMERO.server-5.4.1-ice36-b75/lib/server/server.jar!/beanRefContext.xml]: Instantiation of bean failed; nested exception is org.springframework.beans.BeanInstantiationException: Could not instantiate bean class [ome.system.OmeroContext]: Constructor threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'currentDetails' defined in class path resource [ome/services/sec-primitives.xml]: Cannot resolve reference to bean 'roles' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:281) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.autowireConstructor(AbstractAutowireCapableBeanFactory.java:984) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:888) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:479) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:450) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:290) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:287) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:189) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:322) ~[spring-beans.jar:3.0.1.RELEASE]
	... 16 common frames omitted
Caused by: org.springframework.beans.BeanInstantiationException: Could not instantiate bean class [ome.system.OmeroContext]: Constructor threw exception; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'currentDetails' defined in class path resource [ome/services/sec-primitives.xml]: Cannot resolve reference to bean 'roles' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:141) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:107) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:273) ~[spring-beans.jar:3.0.1.RELEASE]
	... 25 common frames omitted
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'currentDetails' defined in class path resource [ome/services/sec-primitives.xml]: Cannot resolve reference to bean 'roles' while setting constructor argument; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:328) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveValueIfNecessary(BeanDefinitionValueResolver.java:106) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.resolveConstructorArguments(ConstructorResolver.java:600) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:140) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.autowireConstructor(AbstractAutowireCapableBeanFactory.java:984) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:888) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:479) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:450) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:290) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:287) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:189) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:562) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:871) ~[spring-context.jar:3.0.1.RELEASE]
	at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:423) ~[spring-context.jar:3.0.1.RELEASE]
	at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:139) ~[spring-context.jar:3.0.1.RELEASE]
	at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:105) ~[spring-context.jar:3.0.1.RELEASE]
	at ome.system.OmeroContext.<init>(OmeroContext.java:97) ~[common.jar:na]
	at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method) ~[na:1.8.0_144]
	at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62) ~[na:1.8.0_144]
	at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45) ~[na:1.8.0_144]
	at java.lang.reflect.Constructor.newInstance(Constructor.java:423) ~[na:1.8.0_144]
	at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:126) ~[spring-beans.jar:3.0.1.RELEASE]
	... 27 common frames omitted
Caused by: org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'dbPatchCheck' defined in class path resource [ome/services/startup.xml]: Invocation of init method failed; nested exception is ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1403) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:513) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:450) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:290) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:287) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:189) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:280) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:189) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:344) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:964) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:870) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:479) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:450) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:290) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:287) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:189) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.BeanDefinitionValueResolver.resolveReference(BeanDefinitionValueResolver.java:322) ~[spring-beans.jar:3.0.1.RELEASE]
	... 49 common frames omitted
Caused by: ome.conditions.InternalException: 
***************************************************************************************
DB version (OMERO5.3__0) does not match omero.properties (OMERO5.4__0). Please apply a db upgrade.
See https://docs.openmicroscopy.org/latest/omero/sysadmins/server-upgrade.html
***************************************************************************************

	at ome.services.util.DBPatchCheck.start(DBPatchCheck.java:71) ~[server.jar:na]
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) ~[na:1.8.0_144]
	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) ~[na:1.8.0_144]
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) ~[na:1.8.0_144]
	at java.lang.reflect.Method.invoke(Method.java:498) ~[na:1.8.0_144]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeCustomInitMethod(AbstractAutowireCapableBeanFactory.java:1527) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1468) ~[spring-beans.jar:3.0.1.RELEASE]
	at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1400) ~[spring-beans.jar:3.0.1.RELEASE]
	... 67 common frames omitted