Feedback | Insight Bug | 29420 (closed)
| Url | https://www.openmicroscopy.org/qa2/qa2/qa/feedback/29420/?token=7094483898aa7c66e564cd8b81b34bf8 | |
|---|---|---|
| ID | 29420 | |
| Application | Insight Bug 5.5.11 | |
| Created | 2020 07 16 17:42:40 | |
| Status | closed  | |
| Reported by | antonio.politi@mpibpc.mpg.de | |
| From IP | 134.76.223.149 | |
| OS name | Windows 10 10.0 | |
| Comment |
This error causes a crash. Selected 96 images to be imported in a screen under my name and with full access rights. | |
| Error | ||
| Ticket | no tickets | |
| Test results | No errors in this fileset. | |
Leave a Reply
4 comments:
2020 07 20 12:02:52 by unknown I attached my comment to an existing discussion. |
2020 07 20 09:50:37 by s.besson@... Hi, in order for the data to be imported as a screen in OMERO, it needs to be stored using a HCS-aware file format that the Bio-Formats library understands. The naming of the indidividual files is not sufficient, some metadata expressing the plate/screen/well relationships are needed. This metadata is usually stored as a separate XML file for data generated by most High-Content Screening acquisition systems. If this file does not exist, your options are either to recreate this representation using e.g. OME-XML companion files or to convert your data from Datasets into plates post-import into the system. In both cases, feel free to start a public discussion on https://forum.image.sc/ if you need guidance. |
2020 07 16 18:16:48 by unknown Hello, The images have a postfix from 01 to 96. Could this be the problem? Do they have to have a postfix A01, A02, etc. in their name? Thanks When I convert the dataset it just works. |
2020 07 16 17:52:50 by j.burel@... Thanks Antonio for the report. Cheers Jean-marie |