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Annotations
Attributes
Diagrams
Facets
Identity Constraints
Instances
Model
Properties
Source
Used by
Main schema ome.xsd
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
Open Microscopy Environment
OME XML Schema June 2016
Properties
attribute form default unqualified
element form default qualified
version 2
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element OME
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The OME element is a container for all information objects accessible by OME.
        These information objects include descriptions of the imaging experiments
        and the people who perform them, descriptions of the microscope, the resulting
        images and how they were acquired, the analyses performed on those images,
        and the analysis results themselves.
        An OME file may contain any or all of this information.

        With the creation of the Metadata Only Companion OME-XML and Binary Only OME-TIFF files
        the top level OME node has changed slightly.
        It can EITHER:
        Contain all the previously expected elements
        OR:
        Contain a single BinaryOnly element that points at
        its Metadata Only Companion OME-XML file.
Diagram
Diagram ome_xsd.tmp#OME_UUID ome_xsd.tmp#OME_Creator ome_xsd.tmp#Rights ome_xsd.tmp#Project ome_xsd.tmp#Dataset ome_xsd.tmp#Folder ome_xsd.tmp#Experiment ome_xsd.tmp#Plate ome_xsd.tmp#Screen ome_xsd.tmp#Experimenter ome_xsd.tmp#ExperimenterGroup ome_xsd.tmp#Instrument ome_xsd.tmp#Image ome_xsd.tmp#StructuredAnnotations ome_xsd.tmp#ROI ome_xsd.tmp#OME_BinaryOnly
Properties
content complex
Model
Children BinaryOnly, Dataset, Experiment, Experimenter, ExperimenterGroup, Folder, Image, Instrument, Plate, Project, ROI, Rights, Screen, StructuredAnnotations
Instance
<OME Creator="" UUID="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Rights>{0,1}</Rights>
  <Project ID="" Name="">{0,unbounded}</Project>
  <Dataset ID="" Name="">{0,unbounded}</Dataset>
  <Folder ID="" Name="">{0,unbounded}</Folder>
  <Experiment ID="" Type="">{0,unbounded}</Experiment>
  <Plate ColumnNamingConvention="" Columns="" ExternalIdentifier="" FieldIndex="" ID="" Name="" RowNamingConvention="" Rows="" Status="" WellOriginX="" WellOriginXUnit="reference frame" WellOriginY="" WellOriginYUnit="reference frame">{0,unbounded}</Plate>
  <Screen ID="" Name="" ProtocolDescription="" ProtocolIdentifier="" ReagentSetDescription="" ReagentSetIdentifier="" Type="">{0,unbounded}</Screen>
  <Experimenter Email="" FirstName="" ID="" Institution="" LastName="" MiddleName="" UserName="">{0,unbounded}</Experimenter>
  <ExperimenterGroup ID="" Name="">{0,unbounded}</ExperimenterGroup>
  <Instrument ID="">{0,unbounded}</Instrument>
  <Image ID="" Name="">{0,unbounded}</Image>
  <StructuredAnnotations>{0,1}</StructuredAnnotations>
  <ROI ID="" Name="">{0,unbounded}</ROI>
  <BinaryOnly MetadataFile="" UUID="">{1,1}</BinaryOnly>
</OME>
Attributes
QName Type Use Annotation
Creator xsd:string optional
This is the name of the creating application of the OME-XML
and preferably its full version.
e.g "CompanyName, SoftwareName, V2.6.3456"
This is optional but we hope it will be set by applications
writing out OME-XML from scratch.
UUID UniversallyUniqueIdentifier optional
This unique identifier is used to keep track of multi part files.
            It allows the links between files to survive renaming.

            While OPTIONAL in the general case this is REQUIRED in a
            MetadataOnly Companion to a collection of BinaryOnly files.
Source
<xsd:element name="OME">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:documentation>The OME element is a container for all information objects accessible by OME. These information objects include descriptions of the imaging experiments and the people who perform them, descriptions of the microscope, the resulting images and how they were acquired, the analyses performed on those images, and the analysis results themselves. An OME file may contain any or all of this information. With the creation of the Metadata Only Companion OME-XML and Binary Only OME-TIFF files the top level OME node has changed slightly. It can EITHER: Contain all the previously expected elements OR: Contain a single BinaryOnly element that points at its Metadata Only Companion OME-XML file.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element ref="Rights" minOccurs="0" maxOccurs="1"/>
      <xsd:choice>
        <!-- Either: standard expected elements -->
        <xsd:sequence>
          <xsd:element ref="Project" minOccurs="0" maxOccurs="unbounded"/>
          <xsd:element ref="Dataset" minOccurs="0" maxOccurs="unbounded"/>
          <xsd:element ref="Folder" minOccurs="0" maxOccurs="unbounded"/>
          <xsd:element ref="Experiment" minOccurs="0" maxOccurs="unbounded"/>
          <xsd:element ref="Plate" minOccurs="0" maxOccurs="unbounded"/>
          <xsd:element ref="Screen" minOccurs="0" maxOccurs="unbounded"/>
          <xsd:element ref="Experimenter" minOccurs="0" maxOccurs="unbounded"/>
          <xsd:element ref="ExperimenterGroup" minOccurs="0" maxOccurs="unbounded"/>
          <xsd:element ref="Instrument" minOccurs="0" maxOccurs="unbounded"/>
          <xsd:element ref="Image" minOccurs="0" maxOccurs="unbounded"/>
          <xsd:element ref="StructuredAnnotations" minOccurs="0" maxOccurs="1"/>
          <xsd:element ref="ROI" minOccurs="0" maxOccurs="unbounded"/>
        </xsd:sequence>
        <!-- Or: Single BinaryOnly element -->
        <xsd:element name="BinaryOnly" minOccurs="1" maxOccurs="1">
          <xsd:annotation>
            <xsd:documentation>Pointer to an external metadata file. If this element is present, then no other metadata may be present in this file, i.e. this file is a place-holder.</xsd:documentation>
          </xsd:annotation>
          <xsd:complexType>
            <xsd:attribute name="MetadataFile" type="xsd:string" use="required">
              <xsd:annotation>
                <xsd:documentation>Filename of the OME-XML metadata file for this binary data. If the file cannot be found, a search can be performed based on the UUID.</xsd:documentation>
              </xsd:annotation>
            </xsd:attribute>
            <xsd:attribute name="UUID" type="UniversallyUniqueIdentifier" use="required">
              <xsd:annotation>
                <xsd:documentation>The unique identifier of another OME-XML block whose metadata describes the binary data in this file. This UUID is considered authoritative regardless of mismatches in the filename.</xsd:documentation>
              </xsd:annotation>
            </xsd:attribute>
          </xsd:complexType>
        </xsd:element>
        <!-- End of MetadataOnly Element -->
      </xsd:choice>
    </xsd:sequence>
    <xsd:attribute name="UUID" type="UniversallyUniqueIdentifier" use="optional">
      <xsd:annotation>
        <xsd:documentation>This unique identifier is used to keep track of multi part files. It allows the links between files to survive renaming. While OPTIONAL in the general case this is REQUIRED in a MetadataOnly Companion to a collection of BinaryOnly files.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Creator" type="xsd:string" use="optional">
      <xsd:annotation>
        <xsd:documentation>This is the name of the creating application of the OME-XML and preferably its full version. e.g "CompanyName, SoftwareName, V2.6.3456" This is optional but we hope it will be set by applications writing out OME-XML from scratch.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
  <!-- Unique IDs -->
  <xsd:key name="ChannelIDKey">
    <xsd:selector xpath="OME:Image/OME:Pixels/OME:Channel"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="DatasetIDKey">
    <xsd:selector xpath="OME:Dataset"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="DetectorIDKey">
    <xsd:selector xpath="OME:Instrument/OME:Detector"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="DichroicIDKey">
    <xsd:selector xpath="OME:Instrument/OME:Dichroic"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="ExperimentIDKey">
    <xsd:selector xpath="OME:Experiment"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="ExperimenterIDKey">
    <xsd:selector xpath="OME:Experimenter"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="FilterIDKey">
    <xsd:selector xpath="OME:Instrument/OME:Filter"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="FilterSetIDKey">
    <xsd:selector xpath="OME:Instrument/OME:FilterSet"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="FolderIDKey">
    <xsd:selector xpath="OME:Folder"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="ExperimenterGroupIDKey">
    <xsd:selector xpath="OME:ExperimenterGroup"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="ImageIDKey">
    <xsd:selector xpath="OME:Image"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="InstrumentIDKey">
    <xsd:selector xpath="OME:Instrument"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="LightSourceIDKey">
    <xsd:selector xpath="OME:Instrument/OME:Laser|OME:Instrument/OME:Arc|OME:Instrument/OME:Filament|OME:Instrument/OME:LightEmittingDiode|OME:Instrument/OME:GenericExcitationSource"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="MicrobeamManipulationIDKey">
    <xsd:selector xpath="OME:Experiment/OME:MicrobeamManipulation"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="ObjectiveIDKey">
    <xsd:selector xpath="OME:Instrument/OME:Objective"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="PixelsIDKey">
    <xsd:selector xpath="OME:Image/OME:Pixels"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="PlateIDKey">
    <xsd:selector xpath="OME:Plate"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="ProjectIDKey">
    <xsd:selector xpath="OME:Project"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="ReagentIDKey">
    <xsd:selector xpath="OME:Screen/OME:Reagent"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="ScreenAcquisitionIDKey">
    <xsd:selector xpath="OME:Screen/OME:ScreenAcquisition"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="ScreenIDKey">
    <xsd:selector xpath="OME:Screen"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="WellIDKey">
    <xsd:selector xpath="OME:Plate/OME:Well"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="WellSampleIDKey">
    <xsd:selector xpath="OME:Plate/OME:Well/OME:WellSample"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="ROIIDKey">
    <xsd:selector xpath="OME:ROI"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="ShapeIDKey">
    <xsd:selector xpath="OME:ROI/OME:Union/OME:Rectangle|OME:ROI/OME:Union/OME:Mask|OME:ROI/OME:Union/OME:Ellipse|OME:ROI/OME:Union/OME:Point|OME:ROI/OME:Union/OME:Line|OME:ROI/OME:Union/OME:Polyline|OME:ROI/OME:Union/OME:Polygon|OME:ROI/OME:Union/OME:Label"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <xsd:key name="AnnotationIDKey">
    <xsd:selector xpath="OME:StructuredAnnotations/*"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <!-- Unique references -->
  <xsd:key name="WellSampleImageRefIDKey">
    <xsd:selector xpath="OME:Plate/OME:Well/OME:WellSample/OME:ImageRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:key>
  <!-- Valid references -->
  <xsd:keyref name="DatasetExperimenterIDKeyRef" refer="OME:ExperimenterIDKey">
    <xsd:selector xpath="OME:Dataset/OME:ExperimenterRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="DatasetExperimenterGroupIDKeyRef" refer="OME:ExperimenterGroupIDKey">
    <xsd:selector xpath="OME:Dataset/OME:ExperimenterGroupRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="DatasetProjectIDKeyRef" refer="OME:ProjectIDKey">
    <xsd:selector xpath="OME:Dataset/OME:ProjectRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ExperimentExperimenterIDKeyRef" refer="OME:ExperimenterIDKey">
    <xsd:selector xpath="OME:Experiment/OME:ExperimenterRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ExperimentMicrobeamManipulationExperimenterIDKeyRef" refer="OME:ExperimenterIDKey">
    <xsd:selector xpath="OME:Experiment/OME:MicrobeamManipulation/OME:ExperimenterRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ExperimentMicrobeamManipulationLightSourceSettingsLightSourceIDKeyRef" refer="OME:LightSourceIDKey">
    <xsd:selector xpath="OME:Experiment/OME:MicrobeamManipulation/OME:LightSourceSettings"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ExperimenterExperimenterGroupIDKeyRef" refer="OME:ExperimenterGroupIDKey">
    <xsd:selector xpath="OME:Experimenter/OME:ExperimenterGroupRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ExperimenterGroupContactExperimenterIDKeyRef" refer="OME:ExperimenterIDKey">
    <xsd:selector xpath="OME:ExperimenterGroup/OME:Contact"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ExperimenterGroupLeaderExperimenterIDKeyRef" refer="OME:ExperimenterIDKey">
    <xsd:selector xpath="OME:ExperimenterGroup/OME:Leader"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="FolderFolderIDKeyRef" refer="OME:FolderIDKey">
    <xsd:selector xpath="OME:Folder/OME:FolderRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="FolderImageIDKeyRef" refer="OME:ImageIDKey">
    <xsd:selector xpath="OME:Folder/OME:ImageRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="FolderROIIDKeyRef" refer="OME:ROIIDKey">
    <xsd:selector xpath="OME:Folder/OME:ROIRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ImageDatasetIDKeyRef" refer="OME:DatasetIDKey">
    <xsd:selector xpath="OME:Image/OME:DatasetRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ImageExperimenterIDKeyRef" refer="OME:ExperimenterIDKey">
    <xsd:selector xpath="OME:Image/OME:ExperimenterRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ImageExperimentIDKeyRef" refer="OME:ExperimentIDKey">
    <xsd:selector xpath="OME:Image/OME:ExperimentRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ImageExperimenterGroupIDKeyRef" refer="OME:ExperimenterGroupIDKey">
    <xsd:selector xpath="OME:Image/OME:ExperimenterGroupRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ImageInstrumentIDKeyRef" refer="OME:InstrumentIDKey">
    <xsd:selector xpath="OME:Image/OME:InstrumentRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ImageMicrobeamManipulationIDKeyRef" refer="OME:MicrobeamManipulationIDKey">
    <xsd:selector xpath="OME:Image/OME:MicrobeamManipulationRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ImageObjectiveSettingsObjectiveIDKeyRef" refer="OME:ObjectiveIDKey">
    <xsd:selector xpath="OME:Image/OME:ObjectiveSettings"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ImagePixelsChannelDetectorSettingsDetectorIDKeyRef" refer="OME:DetectorIDKey">
    <xsd:selector xpath="OME:Image/OME:Pixels/OME:Channel/OME:DetectorSettings"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ImagePixelsChannelFilterSetIDKeyRef" refer="OME:FilterSetIDKey">
    <xsd:selector xpath="OME:Image/OME:Pixels/OME:Channel/OME:FilterSetRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ImagePixelsChannelLightPathExcitationFilterIDKeyRef" refer="OME:FilterIDKey">
    <xsd:selector xpath="OME:Image/OME:Pixels/OME:Channel/OME:LightPath/OME:ExcitationFilterPath/OME:FilterRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ImagePixelsChannelLightPathExcitationDichroicIDKeyRef" refer="OME:DichroicIDKey">
    <xsd:selector xpath="OME:Image/OME:Pixels/OME:Channel/OME:LightPath/OME:ExcitationFilterPath/OME:DichroicRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ImagePixelsChannelLightPathDichroicIDKeyRef" refer="OME:DichroicIDKey">
    <xsd:selector xpath="OME:Image/OME:Pixels/OME:Channel/OME:LightPath/OME:DichroicRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ImagePixelsChannelLightPathEmissionFilterIDKeyRef" refer="OME:FilterIDKey">
    <xsd:selector xpath="OME:Image/OME:Pixels/OME:Channel/OME:LightPath/OME:EmissionFilterPath/OME:FilterRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ImagePixelsChannelLightPathEmissionDichroicIDKeyRef" refer="OME:DichroicIDKey">
    <xsd:selector xpath="OME:Image/OME:Pixels/OME:Channel/OME:LightPath/OME:EmissionFilterPath/OME:DichroicRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ImagePixelsChannelLightSourceSettingsLightSourceIDKeyRef" refer="OME:LightSourceIDKey">
    <xsd:selector xpath="OME:Image/OME:Pixels/OME:Channel/OME:LightSourceSettings"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="InstrumentFilterSetExcitationFilterIDKeyRef" refer="OME:FilterIDKey">
    <xsd:selector xpath="OME:Instrument/OME:FilterSet/OME:ExcitationFilterRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="InstrumentFilterSetDichroicIDKeyRef" refer="OME:DichroicIDKey">
    <xsd:selector xpath="OME:Instrument/OME:FilterSet/OME:DichroicRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="InstrumentFilterSetEmissionFilterIDKeyRef" refer="OME:FilterIDKey">
    <xsd:selector xpath="OME:Instrument/OME:FilterSet/OME:EmissionFilterRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="InstrumentLightSourceLaserPumpLightSourceIDKey" refer="OME:LightSourceIDKey">
    <xsd:selector xpath="OME:Instrument/OME:LightSource/OME:Laser/OME:Pump"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="PlateScreenIDKeyRef" refer="OME:ScreenIDKey">
    <xsd:selector xpath="OME:Plate/OME:ScreenRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="PlateWellReagentIDKeyRef" refer="OME:ReagentIDKey">
    <xsd:selector xpath="OME:Plate/OME:Well/OME:ReagentRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="PlateWellWellSampleImageIDKeyRef" refer="OME:ImageIDKey">
    <xsd:selector xpath="OME:Plate/OME:Well/OME:WellSample/OME:ImageRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ProjectExperimenterIDKeyRef" refer="OME:ExperimenterIDKey">
    <xsd:selector xpath="OME:Project/OME:ExperimenterRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ProjectExperimenterGroupIDKeyRef" refer="OME:ExperimenterGroupIDKey">
    <xsd:selector xpath="OME:Project/OME:ExperimenterGroupRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ScreenPlateIDKeyRef" refer="OME:PlateIDKey">
    <xsd:selector xpath="OME:Screen/OME:PlateRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ScreenScreenAcquisitionWellSampleIDKeyRef" refer="OME:WellSampleIDKey">
    <xsd:selector xpath="OME:Screen/OME:ScreenAcquisition/OME:WellSampleRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ExperimentMicrobeamManipulationROIIDKeyRef" refer="OME:ROIIDKey">
    <xsd:selector xpath="OME:Experiment/OME:MicrobeamManipulation/ROIRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="ImageROIIDKeyRef" refer="OME:ROIIDKey">
    <xsd:selector xpath="OME:Image/ROIRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="AnnotationRefAnnotationIDKeyRef" refer="OME:AnnotationIDKey">
    <xsd:selector xpath=".//OME:AnnotationRef"/>
    <xsd:field xpath="@ID"/>
  </xsd:keyref>
  <xsd:keyref name="AnnotationAnnotatorExperimenterIDKeyRef" refer="OME:ExperimenterIDKey">
    <xsd:selector xpath="OME:StructuredAnnotations/*"/>
    <xsd:field xpath="@Annotator"/>
  </xsd:keyref>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Rights
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The rights holder of this data and the rights held.
Diagram
Diagram ome_xsd.tmp#Rights_RightsHolder ome_xsd.tmp#Rights_RightsHeld
Properties
content complex
Used by
Element OME
Model
Children RightsHeld, RightsHolder
Instance
<Rights xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <RightsHolder>{0,1}</RightsHolder>
  <RightsHeld>{0,1}</RightsHeld>
</Rights>
Source
<xsd:element name="Rights">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Rights</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The rights holder of this data and the rights held.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element name="RightsHolder" minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:documentation>The rights holder for this data. [plain-text multi-line string] e.g. "Copyright (C) 2002 - 2016 Open Microscopy Environment"</xsd:documentation>
        </xsd:annotation>
        <xsd:simpleType>
          <xsd:restriction base="xsd:string">
            <xsd:whiteSpace value="preserve"/>
          </xsd:restriction>
        </xsd:simpleType>
      </xsd:element>
      <xsd:element name="RightsHeld" minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:documentation>The rights held by the rights holder. [plain-text multi-line string] e.g. "All rights reserved" or "Creative Commons Attribution 3.0 Unported License"</xsd:documentation>
        </xsd:annotation>
        <xsd:simpleType>
          <xsd:restriction base="xsd:string">
            <xsd:whiteSpace value="preserve"/>
          </xsd:restriction>
        </xsd:simpleType>
      </xsd:element>
    </xsd:sequence>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Rights / RightsHolder
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The rights holder for this data. [plain-text multi-line string]
e.g. "Copyright (C) 2002 - 2016 Open Microscopy Environment"
Diagram
Diagram
Type restriction of xsd:string
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
whiteSpace preserve
Source
<xsd:element name="RightsHolder" minOccurs="0" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>The rights holder for this data. [plain-text multi-line string] e.g. "Copyright (C) 2002 - 2016 Open Microscopy Environment"</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:whiteSpace value="preserve"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Rights / RightsHeld
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The rights held by the rights holder. [plain-text multi-line string]
e.g. "All rights reserved" or "Creative Commons Attribution 3.0 Unported License"
Diagram
Diagram
Type restriction of xsd:string
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
whiteSpace preserve
Source
<xsd:element name="RightsHeld" minOccurs="0" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>The rights held by the rights holder. [plain-text multi-line string] e.g. "All rights reserved" or "Creative Commons Attribution 3.0 Unported License"</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:whiteSpace value="preserve"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Project
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The Project ID is required.
Datasets can be grouped into projects using a many-to-many relationship.
A Dataset may belong to one or more Projects by including one or more ProjectRef elements which refer to Project IDs.
Projects do not directly contain images - only by virtue of containing datasets, which themselves contain images.
Diagram
Diagram ome_xsd.tmp#Project_Name ome_xsd.tmp#Project_ID ome_xsd.tmp#Project_Description ome_xsd.tmp#ExperimenterRef ome_xsd.tmp#ExperimenterGroupRef ome_xsd.tmp#DatasetRef ome_xsd.tmp#AnnotationRef
Properties
content complex
Used by
Element OME
Model
Children AnnotationRef, DatasetRef, Description, ExperimenterGroupRef, ExperimenterRef
Instance
<Project ID="" Name="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <ExperimenterRef ID="">{0,1}</ExperimenterRef>
  <ExperimenterGroupRef ID="">{0,1}</ExperimenterGroupRef>
  <DatasetRef ID="">{0,unbounded}</DatasetRef>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Project>
Attributes
QName Type Use
ID ProjectID required
Name xsd:string optional
Source
<xsd:element name="Project">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Projects</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The Project ID is required. Datasets can be grouped into projects using a many-to-many relationship. A Dataset may belong to one or more Projects by including one or more ProjectRef elements which refer to Project IDs. Projects do not directly contain images - only by virtue of containing datasets, which themselves contain images.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element name="Description" minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:documentation>A description for the project. [plain-text multi-line string]</xsd:documentation>
        </xsd:annotation>
        <xsd:simpleType>
          <xsd:restriction base="xsd:string">
            <xsd:whiteSpace value="preserve"/>
          </xsd:restriction>
        </xsd:simpleType>
      </xsd:element>
      <xsd:element ref="ExperimenterRef" minOccurs="0" maxOccurs="1"/>
      <xsd:element ref="ExperimenterGroupRef" minOccurs="0" maxOccurs="1"/>
      <xsd:element ref="DatasetRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
      <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
    </xsd:sequence>
    <xsd:attribute name="Name" use="optional" type="xsd:string"/>
    <xsd:attribute name="ID" use="required" type="ProjectID"/>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Project / Description
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A description for the project. [plain-text multi-line string]
Diagram
Diagram
Type restriction of xsd:string
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
whiteSpace preserve
Source
<xsd:element name="Description" minOccurs="0" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>A description for the project. [plain-text multi-line string]</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:whiteSpace value="preserve"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ExperimenterRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This empty element has a required Experimenter ID and an optional DocumentID attribute which refers to one of the Experimenters defined within OME.
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#ExperimenterRef_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Used by
Attributes
QName Type Use
ID ExperimenterID required
Source
<xsd:element name="ExperimenterRef">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:documentation>This empty element has a required Experimenter ID and an optional DocumentID attribute which refers to one of the Experimenters defined within OME.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="ExperimenterID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ExperimenterGroupRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This empty element has a reference (the ExperimenterGroup ID attribute) to a ExperimenterGroup defined within OME.
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#ExperimenterGroupRef_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Used by
Elements Dataset, Image, Project
Attributes
QName Type Use
ID ExperimenterGroupID required
Source
<xsd:element name="ExperimenterGroupRef">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:documentation>This empty element has a reference (the ExperimenterGroup ID attribute) to a ExperimenterGroup defined within OME.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="ExperimenterGroupID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element DatasetRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The DatasetRef element refers to a Dataset by specifying the Dataset ID attribute.
One or more DatasetRef elements may be listed within the Image element to specify what Datasets
the Image belongs to.
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#DatasetRef_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Used by
Element Project
Attributes
QName Type Use
ID DatasetID required
Source
<xsd:element name="DatasetRef">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:documentation>The DatasetRef element refers to a Dataset by specifying the Dataset ID attribute. One or more DatasetRef elements may be listed within the Image element to specify what Datasets the Image belongs to.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="DatasetID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element AnnotationRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The AnnotationRef element is a reference to an element derived
from the CommonAnnotation element.
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#AnnotationRef_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Used by
Attributes
QName Type Use
ID AnnotationID required
Source
<xsd:element name="AnnotationRef">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:documentation>The AnnotationRef element is a reference to an element derived from the CommonAnnotation element.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="AnnotationID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Dataset
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
An element specifying a collection of images that are always processed together.
Images can belong to more than one Dataset, and a Dataset may contain more than one Image.
Images contain one or more DatasetRef elements to specify what datasets they belong to.
Once a Dataset has been processed in any way, its collection of images cannot be altered.
The ExperimenterRef and ExperimenterGroupRef elements specify the person and group this Dataset belongs to.
Projects may contain one or more Datasets, and Datasets may belong to one or more Projects.
This relationship is specified by listing DatasetRef elements within the Project element.
Diagram
Diagram ome_xsd.tmp#Dataset_Name ome_xsd.tmp#Dataset_ID ome_xsd.tmp#Dataset_Description ome_xsd.tmp#ExperimenterRef ome_xsd.tmp#ExperimenterGroupRef ome_xsd.tmp#ImageRef ome_xsd.tmp#AnnotationRef
Properties
content complex
Used by
Element OME
Model
Children AnnotationRef, Description, ExperimenterGroupRef, ExperimenterRef, ImageRef
Instance
<Dataset ID="" Name="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <ExperimenterRef ID="">{0,1}</ExperimenterRef>
  <ExperimenterGroupRef ID="">{0,1}</ExperimenterGroupRef>
  <ImageRef ID="">{0,unbounded}</ImageRef>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Dataset>
Attributes
QName Type Use Annotation
ID DatasetID required
Name xsd:string optional
A name for the dataset that is suitable for presentation to the user.
Source
<xsd:element name="Dataset">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Datasets</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>An element specifying a collection of images that are always processed together. Images can belong to more than one Dataset, and a Dataset may contain more than one Image. Images contain one or more DatasetRef elements to specify what datasets they belong to. Once a Dataset has been processed in any way, its collection of images cannot be altered. The ExperimenterRef and ExperimenterGroupRef elements specify the person and group this Dataset belongs to. Projects may contain one or more Datasets, and Datasets may belong to one or more Projects. This relationship is specified by listing DatasetRef elements within the Project element.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element name="Description" minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:documentation>A description for the dataset. [plain-text multi-line string]</xsd:documentation>
        </xsd:annotation>
        <xsd:simpleType>
          <xsd:restriction base="xsd:string">
            <xsd:whiteSpace value="preserve"/>
          </xsd:restriction>
        </xsd:simpleType>
      </xsd:element>
      <xsd:element ref="ExperimenterRef" minOccurs="0" maxOccurs="1"/>
      <xsd:element ref="ExperimenterGroupRef" minOccurs="0" maxOccurs="1"/>
      <xsd:element ref="ImageRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
      <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
    </xsd:sequence>
    <xsd:attribute name="Name" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>A name for the dataset that is suitable for presentation to the user.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="ID" use="required" type="DatasetID"/>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Dataset / Description
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A description for the dataset. [plain-text multi-line string]
Diagram
Diagram
Type restriction of xsd:string
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
whiteSpace preserve
Source
<xsd:element name="Description" minOccurs="0" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>A description for the dataset. [plain-text multi-line string]</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:whiteSpace value="preserve"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ImageRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The ImageRef element is a reference to an Image element.
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#ImageRef_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Used by
Attributes
QName Type Use
ID ImageID required
Source
<xsd:element name="ImageRef">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:documentation>The ImageRef element is a reference to an Image element.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="ImageID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Folder
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
An element specifying a possibly heterogeneous collection of data.
Folders may contain Folders so that data may be organized within a tree of Folders.
Data may be in multiple Folders but a Folder may not be in more than one other Folder.
Diagram
Diagram ome_xsd.tmp#Folder_ID ome_xsd.tmp#Folder_Name ome_xsd.tmp#Folder_Description ome_xsd.tmp#FolderRef ome_xsd.tmp#ImageRef ome_xsd.tmp#ROIRef ome_xsd.tmp#AnnotationRef
Properties
content complex
Used by
Element OME
Model
Children AnnotationRef, Description, FolderRef, ImageRef, ROIRef
Instance
<Folder ID="" Name="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <FolderRef ID="">{0,unbounded}</FolderRef>
  <ImageRef ID="">{0,unbounded}</ImageRef>
  <ROIRef ID="">{0,unbounded}</ROIRef>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Folder>
Attributes
QName Type Use Annotation
ID FolderID required
Name xsd:string optional
A name for the folder that is suitable for presentation to the user.
Source
<xsd:element name="Folder">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Folders</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>An element specifying a possibly heterogeneous collection of data. Folders may contain Folders so that data may be organized within a tree of Folders. Data may be in multiple Folders but a Folder may not be in more than one other Folder.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element name="Description" minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:documentation>A description for the folder. [plain-text multi-line string]</xsd:documentation>
        </xsd:annotation>
        <xsd:simpleType>
          <xsd:restriction base="xsd:string">
            <xsd:whiteSpace value="preserve"/>
          </xsd:restriction>
        </xsd:simpleType>
      </xsd:element>
      <xsd:element ref="FolderRef" minOccurs="0" maxOccurs="unbounded"/>
      <xsd:element ref="ImageRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
      <xsd:element ref="ROIRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
      <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
    </xsd:sequence>
    <xsd:attribute name="ID" use="required" type="FolderID"/>
    <xsd:attribute name="Name" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>A name for the folder that is suitable for presentation to the user.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Folder / Description
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A description for the folder. [plain-text multi-line string]
Diagram
Diagram
Type restriction of xsd:string
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
whiteSpace preserve
Source
<xsd:element name="Description" minOccurs="0" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>A description for the folder. [plain-text multi-line string]</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:whiteSpace value="preserve"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element FolderRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The FolderRef element refers to a Folder by specifying the Folder ID attribute.
One or more FolderRef elements may be listed within the Folder element to specify what Folders
the Folder contains. This tree hierarchy must be acyclic.
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#FolderRef_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Used by
Element Folder
Attributes
QName Type Use
ID FolderID required
Source
<xsd:element name="FolderRef">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:documentation>The FolderRef element refers to a Folder by specifying the Folder ID attribute. One or more FolderRef elements may be listed within the Folder element to specify what Folders the Folder contains. This tree hierarchy must be acyclic.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="FolderID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ROIRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#ROIRef_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Used by
Attributes
QName Type Use
ID ROIID required
Source
<xsd:element name="ROIRef">
  <!-- top level definition -->
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="ROIID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Experiment
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This element describes the type of experiment.  The required Type attribute must contain one or more entries from the following list:
FP FRET Time-lapse 4-D+ Screen Immunocytochemistry FISH Electrophysiology  Ion-Imaging Colocalization PGI/Documentation
FRAP Photoablation Optical-Trapping Photoactivation Fluorescence-Lifetime Spectral-Imaging Other
FP refers to fluorescent proteins, PGI/Documentation is not a 'data' image.
The optional Description element may contain free text to further describe the experiment.
Diagram
Diagram ome_xsd.tmp#Experiment_Type ome_xsd.tmp#Experiment_ID ome_xsd.tmp#Experiment_Description ome_xsd.tmp#ExperimenterRef ome_xsd.tmp#MicrobeamManipulation
Properties
content complex
Used by
Element OME
Model
Children Description, ExperimenterRef, MicrobeamManipulation
Instance
<Experiment ID="" Type="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <ExperimenterRef ID="">{0,1}</ExperimenterRef>
  <MicrobeamManipulation ID="" Type="">{0,unbounded}</MicrobeamManipulation>
</Experiment>
Attributes
QName Type Use Annotation
ID ExperimentID required
Type list of restriction of xsd:string optional
A term to describe the type of experiment.
Source
<xsd:element name="Experiment">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Experiments</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>This element describes the type of experiment. The required Type attribute must contain one or more entries from the following list: FP FRET Time-lapse 4-D+ Screen Immunocytochemistry FISH Electrophysiology Ion-Imaging Colocalization PGI/Documentation FRAP Photoablation Optical-Trapping Photoactivation Fluorescence-Lifetime Spectral-Imaging Other FP refers to fluorescent proteins, PGI/Documentation is not a 'data' image. The optional Description element may contain free text to further describe the experiment.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element name="Description" minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:documentation>A description for the experiment. [plain-text multi-line string]</xsd:documentation>
        </xsd:annotation>
        <xsd:simpleType>
          <xsd:restriction base="xsd:string">
            <xsd:whiteSpace value="preserve"/>
          </xsd:restriction>
        </xsd:simpleType>
      </xsd:element>
      <xsd:element ref="ExperimenterRef" minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:documentation>This is a link to the Experimenter who conducted the experiment</xsd:documentation>
        </xsd:annotation>
      </xsd:element>
      <xsd:element ref="MicrobeamManipulation" minOccurs="0" maxOccurs="unbounded"/>
    </xsd:sequence>
    <xsd:attribute name="Type" use="optional">
      <xsd:annotation>
        <xsd:documentation>A term to describe the type of experiment.</xsd:documentation>
      </xsd:annotation>
      <xsd:simpleType>
        <xsd:list>
          <xsd:simpleType>
            <xsd:restriction base="xsd:string">
              <xsd:enumeration value="FP"/>
              <xsd:enumeration value="FRET"/>
              <!-- Förster resonance energy transfer, also known as fluorescence resonance energy transfer, resonance energy transfer (RET) or electronic energy transfer (EET) -->
              <xsd:enumeration value="TimeLapse"/>
              <!--  Time-lapse microscopy (microphotography, photomicrography) -->
              <xsd:enumeration value="FourDPlus"/>
              <xsd:enumeration value="Screen"/>
              <xsd:enumeration value="Immunocytochemistry"/>
              <xsd:enumeration value="Immunofluorescence"/>
              <xsd:enumeration value="FISH"/>
              <!-- Fluorescent in situ hybridization -->
              <xsd:enumeration value="Electrophysiology"/>
              <xsd:enumeration value="IonImaging"/>
              <xsd:enumeration value="Colocalization"/>
              <xsd:enumeration value="PGIDocumentation"/>
              <xsd:enumeration value="FluorescenceLifetime"/>
              <!-- Fluorescence lifetime imaging (FLIM) -->
              <xsd:enumeration value="SpectralImaging"/>
              <xsd:enumeration value="Photobleaching"/>
              <xsd:enumeration value="SPIM"/>
              <!-- Selective or Single Plane Illumination Microscopy -->
              <xsd:enumeration value="Other"/>
            </xsd:restriction>
          </xsd:simpleType>
        </xsd:list>
      </xsd:simpleType>
    </xsd:attribute>
    <xsd:attribute name="ID" use="required" type="ExperimentID"/>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Experiment / Description
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A description for the experiment. [plain-text multi-line string]
Diagram
Diagram
Type restriction of xsd:string
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
whiteSpace preserve
Source
<xsd:element name="Description" minOccurs="0" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>A description for the experiment. [plain-text multi-line string]</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:whiteSpace value="preserve"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element MicrobeamManipulation
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
Defines a microbeam operation type and the region of the image it was applied to.
The LightSourceRef element is a reference to a LightSource specified in the Instrument element which was used for a technique other than illumination for
the purpose of imaging. For example, a laser used for photobleaching.
Diagram
Diagram ome_xsd.tmp#MicrobeamManipulation_ID ome_xsd.tmp#MicrobeamManipulation_Type ome_xsd.tmp#MicrobeamManipulation_Description ome_xsd.tmp#ROIRef ome_xsd.tmp#ExperimenterRef ome_xsd.tmp#LightSourceSettings
Properties
content complex
Used by
Element Experiment
Model
Children Description, ExperimenterRef, LightSourceSettings, ROIRef
Instance
<MicrobeamManipulation ID="" Type="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <ROIRef ID="">{1,unbounded}</ROIRef>
  <ExperimenterRef ID="">{1,1}</ExperimenterRef>
  <LightSourceSettings Attenuation="" ID="" Wavelength="" WavelengthUnit="nm">{0,unbounded}</LightSourceSettings>
</MicrobeamManipulation>
Attributes
QName Type Use Annotation
ID MicrobeamManipulationID required
Type list of restriction of xsd:string optional
The type of manipulation performed.
Source
<xsd:element name="MicrobeamManipulation">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>MicrobeamManipulations</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>Defines a microbeam operation type and the region of the image it was applied to. The LightSourceRef element is a reference to a LightSource specified in the Instrument element which was used for a technique other than illumination for the purpose of imaging. For example, a laser used for photobleaching.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element name="Description" minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:documentation>A description for the Microbeam Manipulation. [plain-text multi-line string]</xsd:documentation>
        </xsd:annotation>
        <xsd:simpleType>
          <xsd:restriction base="xsd:string">
            <xsd:whiteSpace value="preserve"/>
          </xsd:restriction>
        </xsd:simpleType>
      </xsd:element>
      <xsd:element ref="ROIRef" minOccurs="1" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
      <xsd:element ref="ExperimenterRef" minOccurs="1" maxOccurs="1"/>
      <xsd:element ref="LightSourceSettings" minOccurs="0" maxOccurs="unbounded"/>
    </xsd:sequence>
    <xsd:attribute name="ID" use="required" type="MicrobeamManipulationID"/>
    <xsd:attribute name="Type" use="optional">
      <xsd:annotation>
        <xsd:documentation>The type of manipulation performed.</xsd:documentation>
      </xsd:annotation>
      <xsd:simpleType>
        <xsd:list>
          <xsd:simpleType>
            <xsd:restriction base="xsd:string">
              <xsd:enumeration value="FRAP"/>
              <!-- Fluorescence recovery after photobleaching -->
              <xsd:enumeration value="FLIP"/>
              <!-- Fluorescence Loss in Photobleaching -->
              <xsd:enumeration value="InverseFRAP"/>
              <!-- iFRAP, inverse FRAP -->
              <xsd:enumeration value="Photoablation"/>
              <xsd:enumeration value="Photoactivation"/>
              <xsd:enumeration value="Uncaging"/>
              <xsd:enumeration value="OpticalTrapping"/>
              <xsd:enumeration value="Other"/>
            </xsd:restriction>
          </xsd:simpleType>
        </xsd:list>
      </xsd:simpleType>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element MicrobeamManipulation / Description
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A description for the Microbeam Manipulation. [plain-text multi-line string]
Diagram
Diagram
Type restriction of xsd:string
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
whiteSpace preserve
Source
<xsd:element name="Description" minOccurs="0" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>A description for the Microbeam Manipulation. [plain-text multi-line string]</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:whiteSpace value="preserve"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element LightSourceSettings
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#Settings ome_xsd.tmp#LightSourceSettings_ID ome_xsd.tmp#LightSourceSettings_Attenuation ome_xsd.tmp#LightSourceSettings_Wavelength ome_xsd.tmp#LightSourceSettings_WavelengthUnit
Type extension of Settings
Type hierarchy
Properties
content complex
Used by
Attributes
QName Type Default Use Annotation
Attenuation PercentFraction optional
The Attenuation of the light source [units:none]
A fraction, as a value from 0.0 to 1.0.
ID LightSourceID required
Wavelength PositiveFloat optional
The Wavelength of the light source. Units are set by WavelengthUnit.
WavelengthUnit UnitsLength nm optional
The units of the Wavelength of the light source - default:nanometres[nm]
Source
<xsd:element name="LightSourceSettings">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>LightSourceSettingsCombinations</plural>
      </xsdfu>
    </xsd:appinfo>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Settings">
        <xsd:attribute name="ID" use="required" type="LightSourceID"/>
        <xsd:attribute name="Attenuation" use="optional" type="PercentFraction">
          <xsd:annotation>
            <xsd:documentation>The Attenuation of the light source [units:none] A fraction, as a value from 0.0 to 1.0.</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Wavelength" use="optional" type="PositiveFloat">
          <xsd:annotation>
            <xsd:documentation>The Wavelength of the light source. Units are set by WavelengthUnit.</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="WavelengthUnit" use="optional" default="nm" type="UnitsLength">
          <xsd:annotation>
            <xsd:documentation>The units of the Wavelength of the light source - default:nanometres[nm]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Plate
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This element identifies microtiter plates within a screen.
A plate can belong to more than one screen.
The Screen(s) that a plate belongs to are specified by the ScreenRef element.
The Plate ID and Name attributes are required.
The Wells in a plate are numbers from the top-left corner in a grid starting at zero.
i.e. The top-left well of a plate is index (0,0)
Diagram
Diagram ome_xsd.tmp#Plate_ID ome_xsd.tmp#Plate_Name ome_xsd.tmp#Plate_Status ome_xsd.tmp#Plate_ExternalIdentifier ome_xsd.tmp#Plate_ColumnNamingConvention ome_xsd.tmp#Plate_RowNamingConvention ome_xsd.tmp#Plate_WellOriginX ome_xsd.tmp#Plate_WellOriginXUnit ome_xsd.tmp#Plate_WellOriginY ome_xsd.tmp#Plate_WellOriginYUnit ome_xsd.tmp#Plate_Rows ome_xsd.tmp#Plate_Columns ome_xsd.tmp#Plate_FieldIndex ome_xsd.tmp#Plate_Description ome_xsd.tmp#Well ome_xsd.tmp#AnnotationRef ome_xsd.tmp#PlateAcquisition
Properties
content complex
Used by
Element OME
Model
Children AnnotationRef, Description, PlateAcquisition, Well
Instance
<Plate ColumnNamingConvention="" Columns="" ExternalIdentifier="" FieldIndex="" ID="" Name="" RowNamingConvention="" Rows="" Status="" WellOriginX="" WellOriginXUnit="reference frame" WellOriginY="" WellOriginYUnit="reference frame" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <Well Color="-1" Column="" ExternalDescription="" ExternalIdentifier="" ID="" Row="" Type="">{0,unbounded}</Well>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
  <PlateAcquisition EndTime="" ID="" MaximumFieldCount="" Name="" StartTime="">{0,unbounded}</PlateAcquisition>
</Plate>
Attributes
QName Type Default Use Annotation
ColumnNamingConvention NamingConvention optional
The ColumnNamingConvention
Columns PositiveInt optional
The number of columns in the plate
ExternalIdentifier xsd:string optional
The ExternalIdentifier attribute may contain a reference to an external database.
FieldIndex NonNegativeInt optional
The index of the WellSample to display as the default Field
ID PlateID required
Name xsd:string optional
The Name identifies the plate to the user.
            It is used much like the ID, and so must be
            unique within the document.

            If a plate name is not available when one is needed
            it will be constructed in the following order:
            1. If name is available use it.
            2. If not use "Start time - End time"
            (NOTE: Not a subtraction! A string representation
            of the two times separated by a dash.)
            3. If these times are not available use the Plate ID.
RowNamingConvention NamingConvention optional
The RowNamingConvention
Rows PositiveInt optional
The number of rows in the plate
Status xsd:string optional
A textual annotation of the current state of the plate with respect to the
experiment work-flow; e.g.
1. Seed cell: done; 2. Transfection: done;      3. Gel doc: todo.
WellOriginX xsd:float optional
This defines the X position to use for the origin of the
            fields (individual images) taken in a well. It is used
            with the X in the WellSample to display the fields
            in the correct position relative to each other. Each Well
            in the plate has the same well origin. Units are set by WellOriginXUnit.

            In the OMERO clients by convention we display the WellOrigin
            in the center of the view.
WellOriginXUnit UnitsLength reference frame optional
The units of the well origin in X - default:reference frame.
WellOriginY xsd:float optional
This defines the Y position to use for the origin of the
            fields (individual images) taken in a well. It is used
            with the Y in the WellSample to display the fields
            in the correct position relative to each other. Each Well
            in the plate has the same well origin.  Units are set by WellOriginYUnit.

            In the OMERO clients by convention we display the WellOrigin
            in the center of the view.
WellOriginYUnit UnitsLength reference frame optional
The units of the well origin in Y - default:reference frame.
Source
<xsd:element name="Plate">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Plates</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>This element identifies microtiter plates within a screen. A plate can belong to more than one screen. The Screen(s) that a plate belongs to are specified by the ScreenRef element. The Plate ID and Name attributes are required. The Wells in a plate are numbers from the top-left corner in a grid starting at zero. i.e. The top-left well of a plate is index (0,0)</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element name="Description" minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:documentation>A description for the plate.</xsd:documentation>
        </xsd:annotation>
        <xsd:simpleType>
          <xsd:restriction base="xsd:string">
            <xsd:whiteSpace value="preserve"/>
          </xsd:restriction>
        </xsd:simpleType>
      </xsd:element>
      <xsd:element ref="Well" minOccurs="0" maxOccurs="unbounded"/>
      <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
      <xsd:element ref="PlateAcquisition" minOccurs="0" maxOccurs="unbounded"/>
    </xsd:sequence>
    <xsd:attribute name="ID" use="required" type="PlateID"/>
    <xsd:attribute name="Name" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>The Name identifies the plate to the user. It is used much like the ID, and so must be unique within the document. If a plate name is not available when one is needed it will be constructed in the following order: 1. If name is available use it. 2. If not use "Start time - End time" (NOTE: Not a subtraction! A string representation of the two times separated by a dash.) 3. If these times are not available use the Plate ID.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Status" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>A textual annotation of the current state of the plate with respect to the experiment work-flow; e.g. 1. Seed cell: done; 2. Transfection: done; 3. Gel doc: todo.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="ExternalIdentifier" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>The ExternalIdentifier attribute may contain a reference to an external database.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="ColumnNamingConvention" use="optional" type="NamingConvention">
      <xsd:annotation>
        <xsd:documentation>The ColumnNamingConvention</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="RowNamingConvention" use="optional" type="NamingConvention">
      <xsd:annotation>
        <xsd:documentation>The RowNamingConvention</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="WellOriginX" use="optional" type="xsd:float">
      <xsd:annotation>
        <xsd:documentation>This defines the X position to use for the origin of the fields (individual images) taken in a well. It is used with the X in the WellSample to display the fields in the correct position relative to each other. Each Well in the plate has the same well origin. Units are set by WellOriginXUnit. In the OMERO clients by convention we display the WellOrigin in the center of the view.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="WellOriginXUnit" use="optional" default="reference frame" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the well origin in X - default:reference frame.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="WellOriginY" use="optional" type="xsd:float">
      <xsd:annotation>
        <xsd:documentation>This defines the Y position to use for the origin of the fields (individual images) taken in a well. It is used with the Y in the WellSample to display the fields in the correct position relative to each other. Each Well in the plate has the same well origin. Units are set by WellOriginYUnit. In the OMERO clients by convention we display the WellOrigin in the center of the view.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="WellOriginYUnit" use="optional" default="reference frame" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the well origin in Y - default:reference frame.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Rows" use="optional" type="PositiveInt">
      <xsd:annotation>
        <xsd:documentation>The number of rows in the plate</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Columns" use="optional" type="PositiveInt">
      <xsd:annotation>
        <xsd:documentation>The number of columns in the plate</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="FieldIndex" use="optional" type="NonNegativeInt">
      <xsd:annotation>
        <xsd:documentation>The index of the WellSample to display as the default Field</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
  <!-- Unique Indexes -->
  <xsd:key name="WellSampleIndex">
    <xsd:selector xpath="Well/WellSample"/>
    <xsd:field xpath="@Index"/>
  </xsd:key>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Plate / Description
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A description for the plate.
Diagram
Diagram
Type restriction of xsd:string
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
whiteSpace preserve
Source
<xsd:element name="Description" minOccurs="0" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>A description for the plate.</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:whiteSpace value="preserve"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Well
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A Well is a component of the Well/Plate/Screen construct to describe screening applications.
A Well has a number of WellSample elements that link to the Images collected in this well.
The ReagentRef links any Reagents that were used in this Well. A well is part of only one Plate.
The origin for the row and column identifiers is the top left corner of the plate starting at zero.
i.e The top left well of a plate is index (0,0)
Diagram
Diagram ome_xsd.tmp#Well_ID ome_xsd.tmp#Well_Column ome_xsd.tmp#Well_Row ome_xsd.tmp#Well_ExternalDescription ome_xsd.tmp#Well_ExternalIdentifier ome_xsd.tmp#Well_Type ome_xsd.tmp#Well_Color ome_xsd.tmp#WellSample ome_xsd.tmp#ReagentRef ome_xsd.tmp#AnnotationRef
Properties
content complex
Used by
Element Plate
Model
Children AnnotationRef, ReagentRef, WellSample
Instance
<Well Color="-1" Column="" ExternalDescription="" ExternalIdentifier="" ID="" Row="" Type="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <WellSample ID="" Index="" PositionX="" PositionXUnit="reference frame" PositionY="" PositionYUnit="reference frame" Timepoint="">{0,unbounded}</WellSample>
  <ReagentRef ID="">{0,1}</ReagentRef>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Well>
Attributes
QName Type Default Use Annotation
Color Color -1 optional
A marker color used to highlight the well - encoded as RGBA
The default value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
Column NonNegativeInt required
This is the column index of the well, the origin is the top left corner of the plate
with the first column of cells being column zero. i.e top left is (0,0)
The combination of Row, Column has to be unique for each well in a plate.
ExternalDescription xsd:string optional
A description of the externally defined identifier for this plate.
ExternalIdentifier xsd:string optional
The ExternalIdentifier attribute may contain a reference to an external database.
ID WellID required
Row NonNegativeInt required
This is the row index of the well, the origin is the top left corner of the plate
with the first row of wells being row zero. i.e top left is (0,0)
The combination of Row, Column has to be unique for each well in a plate.
Type xsd:string optional
A human readable identifier for the screening status.
e.g. empty, positive control, negative control, control, experimental, etc.
Source
<xsd:element name="Well">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Wells</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>A Well is a component of the Well/Plate/Screen construct to describe screening applications. A Well has a number of WellSample elements that link to the Images collected in this well. The ReagentRef links any Reagents that were used in this Well. A well is part of only one Plate. The origin for the row and column identifiers is the top left corner of the plate starting at zero. i.e The top left well of a plate is index (0,0)</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element ref="WellSample" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <ordered/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
      <xsd:element ref="ReagentRef" minOccurs="0" maxOccurs="1"/>
      <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
    </xsd:sequence>
    <xsd:attribute name="ID" use="required" type="WellID"/>
    <xsd:attribute name="Column" use="required" type="NonNegativeInt">
      <xsd:annotation>
        <xsd:documentation>This is the column index of the well, the origin is the top left corner of the plate with the first column of cells being column zero. i.e top left is (0,0) The combination of Row, Column has to be unique for each well in a plate.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Row" use="required" type="NonNegativeInt">
      <xsd:annotation>
        <xsd:documentation>This is the row index of the well, the origin is the top left corner of the plate with the first row of wells being row zero. i.e top left is (0,0) The combination of Row, Column has to be unique for each well in a plate.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="ExternalDescription" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>A description of the externally defined identifier for this plate.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="ExternalIdentifier" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>The ExternalIdentifier attribute may contain a reference to an external database.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Type" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>A human readable identifier for the screening status. e.g. empty, positive control, negative control, control, experimental, etc.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Color" use="optional" type="Color" default="-1">
      <xsd:annotation>
        <xsd:documentation>A marker color used to highlight the well - encoded as RGBA The default value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value) NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element WellSample
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
WellSample is an individual image that has been captured within a Well.
Diagram
Diagram ome_xsd.tmp#WellSample_ID ome_xsd.tmp#WellSample_PositionX ome_xsd.tmp#WellSample_PositionXUnit ome_xsd.tmp#WellSample_PositionY ome_xsd.tmp#WellSample_PositionYUnit ome_xsd.tmp#WellSample_Timepoint ome_xsd.tmp#WellSample_Index ome_xsd.tmp#ImageRef
Properties
content complex
Used by
Element Well
Model
Children ImageRef
Instance
<WellSample ID="" Index="" PositionX="" PositionXUnit="reference frame" PositionY="" PositionYUnit="reference frame" Timepoint="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <ImageRef ID="">{0,1}</ImageRef>
</WellSample>
Attributes
QName Type Default Use Annotation
ID WellSampleID required
Index NonNegativeInt required
This records the order of the well samples. Each
index should be unique for a given plate but they do not
have to be sequential, there may be gaps if part of the
dataset is missing. In the user interface the displayed
value of the index will be calculated modulo the number
of PlateAcquisitions for the plate.
PositionX xsd:float optional
The X position of the field (image) within the well relative to
the well origin defined on the Plate. Units are set by PositionXUnit.
PositionXUnit UnitsLength reference frame optional
The units of the position in X - default:reference frame.
PositionY xsd:float optional
The Y position of the field (image) within the well relative to
the well origin defined on the Plate. Units are set by PositionYUnit.
PositionYUnit UnitsLength reference frame optional
The units of the position in Y - default:reference frame.
Timepoint xsd:dateTime optional
The time-point at which the image started to be collected
Source
<xsd:element name="WellSample">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>WellSamples</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>WellSample is an individual image that has been captured within a Well.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element ref="ImageRef" minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <injected/>
            </xsdfu>
          </xsd:appinfo>
          <xsd:documentation>This is the main link to the core Image element</xsd:documentation>
        </xsd:annotation>
      </xsd:element>
    </xsd:sequence>
    <xsd:attribute name="ID" use="required" type="WellSampleID"/>
    <xsd:attribute name="PositionX" use="optional" type="xsd:float">
      <xsd:annotation>
        <xsd:documentation>The X position of the field (image) within the well relative to the well origin defined on the Plate. Units are set by PositionXUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PositionXUnit" use="optional" default="reference frame" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the position in X - default:reference frame.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PositionY" use="optional" type="xsd:float">
      <xsd:annotation>
        <xsd:documentation>The Y position of the field (image) within the well relative to the well origin defined on the Plate. Units are set by PositionYUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PositionYUnit" use="optional" default="reference frame" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the position in Y - default:reference frame.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Timepoint" use="optional" type="xsd:dateTime">
      <xsd:annotation>
        <xsd:documentation>The time-point at which the image started to be collected</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Index" use="required" type="NonNegativeInt">
      <xsd:annotation>
        <xsd:documentation>This records the order of the well samples. Each index should be unique for a given plate but they do not have to be sequential, there may be gaps if part of the dataset is missing. In the user interface the displayed value of the index will be calculated modulo the number of PlateAcquisitions for the plate.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ReagentRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#ReagentRef_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Used by
Element Well
Attributes
QName Type Use
ID ReagentID required
Source
<xsd:element name="ReagentRef">
  <!-- top level definition -->
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="ReagentID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element PlateAcquisition
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
PlateAcquisition is used to describe a single acquisition run for a plate.
This object is used to record the set of images acquired in a single
acquisition run. The Images for this run are linked to PlateAcquisition
through WellSample.
Diagram
Diagram ome_xsd.tmp#PlateAcquisition_ID ome_xsd.tmp#PlateAcquisition_Name ome_xsd.tmp#PlateAcquisition_EndTime ome_xsd.tmp#PlateAcquisition_StartTime ome_xsd.tmp#PlateAcquisition_MaximumFieldCount ome_xsd.tmp#PlateAcquisition_Description ome_xsd.tmp#WellSampleRef ome_xsd.tmp#AnnotationRef
Properties
content complex
Used by
Element Plate
Model
Children AnnotationRef, Description, WellSampleRef
Instance
<PlateAcquisition EndTime="" ID="" MaximumFieldCount="" Name="" StartTime="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <WellSampleRef ID="">{0,unbounded}</WellSampleRef>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</PlateAcquisition>
Attributes
QName Type Use Annotation
EndTime xsd:dateTime optional
Time when the last image of this acquisition was collected
ID PlateAcquisitionID required
MaximumFieldCount PositiveInt optional
The maximum number of fields (well samples) in any well
in this PlateAcquisition.
This is only used to speed up user interaction by stopping
the reading of every well sample.
Name xsd:string optional
StartTime xsd:dateTime optional
Time when the first image of this acquisition was collected
Source
<xsd:element name="PlateAcquisition">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>PlateAcquisitions</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>PlateAcquisition is used to describe a single acquisition run for a plate. This object is used to record the set of images acquired in a single acquisition run. The Images for this run are linked to PlateAcquisition through WellSample.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element name="Description" minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:documentation>A description for the PlateAcquisition.</xsd:documentation>
        </xsd:annotation>
        <xsd:simpleType>
          <xsd:restriction base="xsd:string">
            <xsd:whiteSpace value="preserve"/>
          </xsd:restriction>
        </xsd:simpleType>
      </xsd:element>
      <xsd:element ref="WellSampleRef" minOccurs="0" maxOccurs="unbounded"/>
      <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
    </xsd:sequence>
    <xsd:attribute name="ID" use="required" type="PlateAcquisitionID"/>
    <xsd:attribute name="Name" use="optional" type="xsd:string"/>
    <xsd:attribute name="EndTime" use="optional" type="xsd:dateTime">
      <xsd:annotation>
        <xsd:documentation>Time when the last image of this acquisition was collected</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="StartTime" use="optional" type="xsd:dateTime">
      <xsd:annotation>
        <xsd:documentation>Time when the first image of this acquisition was collected</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="MaximumFieldCount" use="optional" type="PositiveInt">
      <xsd:annotation>
        <xsd:documentation>The maximum number of fields (well samples) in any well in this PlateAcquisition. This is only used to speed up user interaction by stopping the reading of every well sample.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element PlateAcquisition / Description
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A description for the PlateAcquisition.
Diagram
Diagram
Type restriction of xsd:string
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
whiteSpace preserve
Source
<xsd:element name="Description" minOccurs="0" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>A description for the PlateAcquisition.</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:whiteSpace value="preserve"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element WellSampleRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The WellSampleRef element is a reference to a WellSample element.
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#WellSampleRef_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Used by
Attributes
QName Type Use
ID WellSampleID required
Source
<xsd:element name="WellSampleRef">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:documentation>The WellSampleRef element is a reference to a WellSample element.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="WellSampleID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Screen
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The Screen element is a grouping for Plates.
The required attribute is the Screen's Name and ID - both must be unique within the document.
The Screen element may contain an ExternalRef attribute that refers to an external database.
A description of the screen may be specified in the Description element.
Screens may contain overlapping sets of Plates i.e.      Screens and Plates have a many-to-many relationship.
Plates contain one or more ScreenRef elements to specify what screens they belong to.
Diagram
Diagram ome_xsd.tmp#Screen_ID ome_xsd.tmp#Screen_Name ome_xsd.tmp#Screen_ProtocolIdentifier ome_xsd.tmp#Screen_ProtocolDescription ome_xsd.tmp#Screen_ReagentSetDescription ome_xsd.tmp#Screen_ReagentSetIdentifier ome_xsd.tmp#Screen_Type ome_xsd.tmp#Screen_Description ome_xsd.tmp#Reagent ome_xsd.tmp#Screen_PlateRef ome_xsd.tmp#AnnotationRef
Properties
content complex
Used by
Element OME
Model
Children AnnotationRef, Description, PlateRef, Reagent
Instance
<Screen ID="" Name="" ProtocolDescription="" ProtocolIdentifier="" ReagentSetDescription="" ReagentSetIdentifier="" Type="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <Reagent ID="" Name="" ReagentIdentifier="">{0,unbounded}</Reagent>
  <PlateRef ID="">{0,unbounded}</PlateRef>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Screen>
Attributes
QName Type Use Annotation
ID ScreenID required
Name xsd:string optional
ProtocolDescription xsd:string optional
A description of the screen protocol; may contain very detailed information to
reproduce some of that found in a screening database.
ProtocolIdentifier xsd:string optional
A pointer to an externally defined protocol, usually in a screening database.
ReagentSetDescription xsd:string optional
A description of the set of reagents; may contain very detailed information to
reproduce some of that information found in a screening database.
ReagentSetIdentifier xsd:string optional
A pointer to an externally defined set of reagents, usually in a screening
database/automation database.
Type xsd:string optional
A human readable identifier for the screen type; e.g. RNAi, cDNA, SiRNA, etc.
This string is likely to become an enumeration in future releases.
Source
<xsd:element name="Screen">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Screens</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The Screen element is a grouping for Plates. The required attribute is the Screen's Name and ID - both must be unique within the document. The Screen element may contain an ExternalRef attribute that refers to an external database. A description of the screen may be specified in the Description element. Screens may contain overlapping sets of Plates i.e. Screens and Plates have a many-to-many relationship. Plates contain one or more ScreenRef elements to specify what screens they belong to.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element name="Description" minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:documentation>A description for the screen.</xsd:documentation>
        </xsd:annotation>
        <xsd:simpleType>
          <xsd:restriction base="xsd:string">
            <xsd:whiteSpace value="preserve"/>
          </xsd:restriction>
        </xsd:simpleType>
      </xsd:element>
      <xsd:element ref="Reagent" minOccurs="0" maxOccurs="unbounded"/>
      <xsd:element name="PlateRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
          <xsd:documentation>The PlateRef element is a reference to a Plate element. Screen elements may have one or more PlateRef elements to define the plates that are part of the screen. Plates may belong to more than one screen.</xsd:documentation>
        </xsd:annotation>
        <xsd:complexType>
          <xsd:complexContent>
            <xsd:extension base="Reference">
              <xsd:attribute name="ID" use="required" type="PlateID"/>
            </xsd:extension>
          </xsd:complexContent>
        </xsd:complexType>
      </xsd:element>
      <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
    </xsd:sequence>
    <xsd:attribute name="ID" use="required" type="ScreenID"/>
    <xsd:attribute name="Name" use="optional" type="xsd:string"/>
    <xsd:attribute name="ProtocolIdentifier" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>A pointer to an externally defined protocol, usually in a screening database.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="ProtocolDescription" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>A description of the screen protocol; may contain very detailed information to reproduce some of that found in a screening database.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="ReagentSetDescription" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>A description of the set of reagents; may contain very detailed information to reproduce some of that information found in a screening database.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="ReagentSetIdentifier" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>A pointer to an externally defined set of reagents, usually in a screening database/automation database.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Type" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>A human readable identifier for the screen type; e.g. RNAi, cDNA, SiRNA, etc. This string is likely to become an enumeration in future releases.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Screen / Description
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A description for the screen.
Diagram
Diagram
Type restriction of xsd:string
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
whiteSpace preserve
Source
<xsd:element name="Description" minOccurs="0" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>A description for the screen.</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:whiteSpace value="preserve"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Reagent
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
Reagent is used to describe a chemical or some other physical experimental parameter.
Diagram
Diagram ome_xsd.tmp#Reagent_ID ome_xsd.tmp#Reagent_Name ome_xsd.tmp#Reagent_ReagentIdentifier ome_xsd.tmp#Reagent_Description ome_xsd.tmp#AnnotationRef
Properties
content complex
Used by
Element Screen
Model
Children AnnotationRef, Description
Instance
<Reagent ID="" Name="" ReagentIdentifier="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Reagent>
Attributes
QName Type Use Annotation
ID ReagentID required
Name xsd:string optional
A short name for the reagent
ReagentIdentifier xsd:string optional
This is a reference to an external (to OME) representation of the Reagent.
It serves as a foreign key into an external database. - It is sometimes referred to as ExternalIdentifier.
Source
<xsd:element name="Reagent">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Reagents</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>Reagent is used to describe a chemical or some other physical experimental parameter.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element name="Description" minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:documentation>A long description for the reagent.</xsd:documentation>
        </xsd:annotation>
        <xsd:simpleType>
          <xsd:restriction base="xsd:string">
            <xsd:whiteSpace value="preserve"/>
          </xsd:restriction>
        </xsd:simpleType>
      </xsd:element>
      <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
    </xsd:sequence>
    <xsd:attribute name="ID" use="required" type="ReagentID"/>
    <xsd:attribute name="Name" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>A short name for the reagent</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="ReagentIdentifier" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>This is a reference to an external (to OME) representation of the Reagent. It serves as a foreign key into an external database. - It is sometimes referred to as ExternalIdentifier.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Reagent / Description
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A long description for the reagent.
Diagram
Diagram
Type restriction of xsd:string
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
whiteSpace preserve
Source
<xsd:element name="Description" minOccurs="0" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>A long description for the reagent.</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:whiteSpace value="preserve"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Screen / PlateRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The PlateRef element is a reference to a Plate element.
Screen elements may have one or more PlateRef elements to define the plates that are part of the screen.
Plates may belong to more than one screen.
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#Screen_Screen_PlateRef_ID
Type extension of Reference
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Attributes
QName Type Use
ID PlateID required
Source
<xsd:element name="PlateRef" minOccurs="0" maxOccurs="unbounded">
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <manytomany/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The PlateRef element is a reference to a Plate element. Screen elements may have one or more PlateRef elements to define the plates that are part of the screen. Plates may belong to more than one screen.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="PlateID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Experimenter
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This element describes a person who performed an imaging experiment.
This person may also be a user of the OME system, in which case the UserName element contains their login name.
Experimenters may belong to one or more groups which are specified using one or more ExperimenterGroupRef elements.
Diagram
Diagram ome_xsd.tmp#Experimenter_ID ome_xsd.tmp#Experimenter_FirstName ome_xsd.tmp#Experimenter_MiddleName ome_xsd.tmp#Experimenter_LastName ome_xsd.tmp#Experimenter_Email ome_xsd.tmp#Experimenter_Institution ome_xsd.tmp#Experimenter_UserName ome_xsd.tmp#AnnotationRef
Properties
content complex
Used by
Element OME
Model
Children AnnotationRef
Instance
<Experimenter Email="" FirstName="" ID="" Institution="" LastName="" MiddleName="" UserName="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Experimenter>
Attributes
QName Type Use Annotation
Email xsd:string optional
A person's email address. [valid email address as string]
FirstName xsd:string optional
First name, sometime called christian name or given name or forename. [plain text string]
ID ExperimenterID required
Institution xsd:string optional
A person's Institution
The organizing structure that people belong to other than groups.  A university, or company, etc.
We do not specify a department element, and do not mean for Institution to be used in this way.
We simply wish to say XXX at YYY.  Where YYY has a better chance of being tied to a geographically fixed location
and of being more recognizable than a group of experimenters. [plain text string]
LastName xsd:string optional
A person's last name sometimes called surname or family name. [plain text string]
MiddleName xsd:string optional
Any other names. [plain text string]
UserName xsd:string optional
This is the username of the experimenter (in a 'unix' or 'database' sense). [plain text string]
Source
<xsd:element name="Experimenter">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Experimenters</plural>
        <global/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>This element describes a person who performed an imaging experiment. This person may also be a user of the OME system, in which case the UserName element contains their login name. Experimenters may belong to one or more groups which are specified using one or more ExperimenterGroupRef elements.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
    </xsd:sequence>
    <xsd:attribute name="ID" use="required" type="ExperimenterID"/>
    <xsd:attribute name="FirstName" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>First name, sometime called christian name or given name or forename. [plain text string]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="MiddleName" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>Any other names. [plain text string]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="LastName" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>A person's last name sometimes called surname or family name. [plain text string]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Email" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>A person's email address. [valid email address as string]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Institution" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>A person's Institution The organizing structure that people belong to other than groups. A university, or company, etc. We do not specify a department element, and do not mean for Institution to be used in this way. We simply wish to say XXX at YYY. Where YYY has a better chance of being tied to a geographically fixed location and of being more recognizable than a group of experimenters. [plain text string]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="UserName" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <unique/>
          </xsdfu>
        </xsd:appinfo>
        <xsd:documentation>This is the username of the experimenter (in a 'unix' or 'database' sense). [plain text string]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ExperimenterGroup
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The ExperimenterGroupID is required.
Information should ideally be specified for at least one Leader as a contact for the group.
The Leaders are themselves Experimenters.
Diagram
Diagram ome_xsd.tmp#ExperimenterGroup_Name ome_xsd.tmp#ExperimenterGroup_ID ome_xsd.tmp#ExperimenterGroup_Description ome_xsd.tmp#ExperimenterRef ome_xsd.tmp#Leader ome_xsd.tmp#AnnotationRef
Properties
content complex
Used by
Element OME
Model
Children AnnotationRef, Description, ExperimenterRef, Leader
Instance
<ExperimenterGroup ID="" Name="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <ExperimenterRef ID="">{0,unbounded}</ExperimenterRef>
  <Leader ID="">{0,unbounded}</Leader>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</ExperimenterGroup>
Attributes
QName Type Use
ID ExperimenterGroupID required
Name xsd:string optional
Source
<xsd:element name="ExperimenterGroup">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>ExperimenterGroups</plural>
        <global/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The ExperimenterGroupID is required. Information should ideally be specified for at least one Leader as a contact for the group. The Leaders are themselves Experimenters.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element name="Description" minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:documentation>A description for the group. [plain-text multi-line string]</xsd:documentation>
        </xsd:annotation>
        <xsd:simpleType>
          <xsd:restriction base="xsd:string">
            <xsd:whiteSpace value="preserve"/>
          </xsd:restriction>
        </xsd:simpleType>
      </xsd:element>
      <xsd:element ref="ExperimenterRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
              <childordered/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
      <xsd:element ref="Leader" minOccurs="0" maxOccurs="unbounded"/>
      <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
    </xsd:sequence>
    <xsd:attribute name="Name" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <unique/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="ID" use="required" type="ExperimenterGroupID"/>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ExperimenterGroup / Description
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A description for the group. [plain-text multi-line string]
Diagram
Diagram
Type restriction of xsd:string
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
whiteSpace preserve
Source
<xsd:element name="Description" minOccurs="0" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>A description for the group. [plain-text multi-line string]</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:whiteSpace value="preserve"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Leader
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
Contact information for a ExperimenterGroup leader specified using a reference
to an Experimenter element defined elsewhere in the document.
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#Leader_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Used by
Attributes
QName Type Use
ID ExperimenterID required
Source
<xsd:element name="Leader">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Leaders</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>Contact information for a ExperimenterGroup leader specified using a reference to an Experimenter element defined elsewhere in the document.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="ExperimenterID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Instrument
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This element describes the instrument used to capture the Image.
It is primarily a container for manufacturer's model and catalog
numbers for the Microscope, LightSource, Detector, Objective and
Filters components.
The Objective element contains the additional elements LensNA and Magnification.
The Filters element can be composed either of separate excitation,
emission filters and a dichroic mirror or a single filter set.
Within the Image itself, a reference is made to this one Filter element.
There may be multiple light sources, detectors, objectives and filters on a microscope.
Each of these has their own ID attribute, which can be referred to from Channel.
It is understood that the light path configuration can be different
for each channel, but cannot be different for each timepoint or
each plane of an XYZ stack.
Diagram
Diagram ome_xsd.tmp#Instrument_ID ome_xsd.tmp#Microscope ome_xsd.tmp#LightSourceGroup ome_xsd.tmp#Detector ome_xsd.tmp#Objective ome_xsd.tmp#FilterSet ome_xsd.tmp#Filter ome_xsd.tmp#Dichroic ome_xsd.tmp#AnnotationRef
Properties
content complex
Used by
Element OME
Model
Children AnnotationRef, Detector, Dichroic, Filter, FilterSet, LightSourceGroup, Microscope, Objective
Instance
<Instrument ID="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Microscope LotNumber="" Manufacturer="" Model="" SerialNumber="" Type="">{0,1}</Microscope>
  <LightSourceGroup ID="" LotNumber="" Manufacturer="" Model="" Power="" PowerUnit="mW" SerialNumber="">{0,unbounded}</LightSourceGroup>
  <Detector AmplificationGain="" Gain="" ID="" LotNumber="" Manufacturer="" Model="" Offset="" SerialNumber="" Type="" Voltage="" VoltageUnit="V" Zoom="">{0,unbounded}</Detector>
  <Objective CalibratedMagnification="" Correction="" ID="" Immersion="" Iris="" LensNA="" LotNumber="" Manufacturer="" Model="" NominalMagnification="" SerialNumber="" WorkingDistance="" WorkingDistanceUnit="µm">{0,unbounded}</Objective>
  <FilterSet ID="" LotNumber="" Manufacturer="" Model="" SerialNumber="">{0,unbounded}</FilterSet>
  <Filter FilterWheel="" ID="" LotNumber="" Manufacturer="" Model="" SerialNumber="" Type="">{0,unbounded}</Filter>
  <Dichroic ID="" LotNumber="" Manufacturer="" Model="" SerialNumber="">{0,unbounded}</Dichroic>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Instrument>
Attributes
QName Type Use
ID InstrumentID required
Source
<xsd:element name="Instrument">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Instruments</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>This element describes the instrument used to capture the Image. It is primarily a container for manufacturer's model and catalog numbers for the Microscope, LightSource, Detector, Objective and Filters components. The Objective element contains the additional elements LensNA and Magnification. The Filters element can be composed either of separate excitation, emission filters and a dichroic mirror or a single filter set. Within the Image itself, a reference is made to this one Filter element. There may be multiple light sources, detectors, objectives and filters on a microscope. Each of these has their own ID attribute, which can be referred to from Channel. It is understood that the light path configuration can be different for each channel, but cannot be different for each timepoint or each plane of an XYZ stack.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element ref="Microscope" minOccurs="0" maxOccurs="1"/>
      <xsd:element ref="LightSourceGroup" minOccurs="0" maxOccurs="unbounded"/>
      <xsd:element ref="Detector" minOccurs="0" maxOccurs="unbounded"/>
      <xsd:element ref="Objective" minOccurs="0" maxOccurs="unbounded"/>
      <xsd:element ref="FilterSet" minOccurs="0" maxOccurs="unbounded"/>
      <xsd:element ref="Filter" minOccurs="0" maxOccurs="unbounded"/>
      <xsd:element ref="Dichroic" minOccurs="0" maxOccurs="unbounded"/>
      <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
    </xsd:sequence>
    <xsd:attribute name="ID" use="required" type="InstrumentID"/>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Microscope
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The microscope's manufacturer specification.
Diagram
Diagram ome_xsd.tmp#ManufacturerSpec_Manufacturer ome_xsd.tmp#ManufacturerSpec_Model ome_xsd.tmp#ManufacturerSpec_SerialNumber ome_xsd.tmp#ManufacturerSpec_LotNumber ome_xsd.tmp#ManufacturerSpec ome_xsd.tmp#Microscope_Type
Type extension of ManufacturerSpec
Type hierarchy
Properties
content complex
Used by
Element Instrument
Attributes
QName Type Use Annotation
LotNumber xsd:string optional
The lot number of the component. [plain text string]
Manufacturer xsd:string optional
The manufacturer of the component. [plain text string]
Model xsd:string optional
The Model of the component. [plain text string]
SerialNumber xsd:string optional
The serial number of the component. [plain text string]
Type restriction of xsd:string optional
Source
<xsd:element name="Microscope">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Microscopes</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The microscope's manufacturer specification.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="ManufacturerSpec">
        <xsd:attribute name="Type" use="optional">
          <xsd:simpleType>
            <xsd:restriction base="xsd:string">
              <xsd:enumeration value="Upright"/>
              <xsd:enumeration value="Inverted"/>
              <xsd:enumeration value="Dissection"/>
              <xsd:enumeration value="Electrophysiology"/>
              <xsd:enumeration value="Other"/>
            </xsd:restriction>
          </xsd:simpleType>
        </xsd:attribute>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element LightSourceGroup
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#ManufacturerSpec_Manufacturer ome_xsd.tmp#ManufacturerSpec_Model ome_xsd.tmp#ManufacturerSpec_SerialNumber ome_xsd.tmp#ManufacturerSpec_LotNumber ome_xsd.tmp#ManufacturerSpec ome_xsd.tmp#LightSource_ID ome_xsd.tmp#LightSource_Power ome_xsd.tmp#LightSource_PowerUnit ome_xsd.tmp#AnnotationRef ome_xsd.tmp#LightSource ome_xsd.tmp#Arc ome_xsd.tmp#Filament ome_xsd.tmp#GenericExcitationSource ome_xsd.tmp#Laser ome_xsd.tmp#LightEmittingDiode
Type LightSource
Type hierarchy
Properties
content complex
abstract true
Substitution Group
Used by
Element Instrument
Model
Children AnnotationRef
Instance
<LightSourceGroup ID="" LotNumber="" Manufacturer="" Model="" Power="" PowerUnit="mW" SerialNumber="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</LightSourceGroup>
Attributes
QName Type Default Use Annotation
ID LightSourceID required
A LightSource ID must be specified for each light source, and the individual
light sources can be referred to by their LightSource IDs (eg from Channel).
LotNumber xsd:string optional
The lot number of the component. [plain text string]
Manufacturer xsd:string optional
The manufacturer of the component. [plain text string]
Model xsd:string optional
The Model of the component. [plain text string]
Power xsd:float optional
The light-source power. Units are set by PowerUnit.
PowerUnit UnitsPower mW optional
The units of the Power - default:milliwatts[mW].
SerialNumber xsd:string optional
The serial number of the component. [plain text string]
Source
<xsd:element name="LightSourceGroup" abstract="true" type="LightSource"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Detector
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The type of detector used to capture the image.
        The Detector ID can be used as a reference within the Channel element in the Image element.
        The values stored in Detector represent the fixed values,
        variable values modified during the acquisition go in DetectorSettings

        Each attribute now has an indication of what type of detector
        it applies to. This is preparatory work for cleaning up and
        possibly splitting this object into sub-types.
Diagram
Diagram ome_xsd.tmp#ManufacturerSpec_Manufacturer ome_xsd.tmp#ManufacturerSpec_Model ome_xsd.tmp#ManufacturerSpec_SerialNumber ome_xsd.tmp#ManufacturerSpec_LotNumber ome_xsd.tmp#ManufacturerSpec ome_xsd.tmp#Detector_Gain ome_xsd.tmp#Detector_Voltage ome_xsd.tmp#Detector_VoltageUnit ome_xsd.tmp#Detector_Offset ome_xsd.tmp#Detector_Zoom ome_xsd.tmp#Detector_AmplificationGain ome_xsd.tmp#Detector_ID ome_xsd.tmp#Detector_Type ome_xsd.tmp#AnnotationRef
Type extension of ManufacturerSpec
Type hierarchy
Properties
content complex
Used by
Element Instrument
Model
Children AnnotationRef
Instance
<Detector AmplificationGain="" Gain="" ID="" LotNumber="" Manufacturer="" Model="" Offset="" SerialNumber="" Type="" Voltage="" VoltageUnit="V" Zoom="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Detector>
Attributes
QName Type Default Use Annotation
AmplificationGain xsd:float optional
Gain applied to the detector signal.
This is the electronic gain (as apposed to the inherent gain) that is set for the detector. [units:none] {used:EMCCD#EMGain}
Gain xsd:float optional
The Detector Gain for this detector, as a float. [units:none] {used:CCD,EMCCD,PMT}
ID DetectorID required
LotNumber xsd:string optional
The lot number of the component. [plain text string]
Manufacturer xsd:string optional
The manufacturer of the component. [plain text string]
Model xsd:string optional
The Model of the component. [plain text string]
Offset xsd:float optional
The Detector Offset. [units:none] {used:CCD,EMCCD}
SerialNumber xsd:string optional
The serial number of the component. [plain text string]
Type restriction of xsd:string optional
The Type of detector. E.g. CCD, PMT, EMCCD etc.
Voltage xsd:float optional
The Voltage of the detector (e.g. PMT voltage) as a float. {used:PMT}
Units are set by VoltageUnit.
VoltageUnit UnitsElectricPotential V optional
The units of the Voltage - default:volts[V].
Zoom xsd:float optional
The fixed Zoom for a detector. [units:none] {used:PMT}
Source
<xsd:element name="Detector">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Detectors</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The type of detector used to capture the image. The Detector ID can be used as a reference within the Channel element in the Image element. The values stored in Detector represent the fixed values, variable values modified during the acquisition go in DetectorSettings Each attribute now has an indication of what type of detector it applies to. This is preparatory work for cleaning up and possibly splitting this object into sub-types.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="ManufacturerSpec">
        <xsd:sequence>
          <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
            <xsd:annotation>
              <xsd:appinfo>
                <xsdfu xmlns="">
                  <manytomany/>
                </xsdfu>
              </xsd:appinfo>
            </xsd:annotation>
          </xsd:element>
        </xsd:sequence>
        <xsd:attribute name="Gain" use="optional" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The Detector Gain for this detector, as a float. [units:none] {used:CCD,EMCCD,PMT}</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Voltage" use="optional" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The Voltage of the detector (e.g. PMT voltage) as a float. {used:PMT} Units are set by VoltageUnit.</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="VoltageUnit" use="optional" default="V" type="UnitsElectricPotential">
          <xsd:annotation>
            <xsd:documentation>The units of the Voltage - default:volts[V].</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Offset" use="optional" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The Detector Offset. [units:none] {used:CCD,EMCCD}</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Zoom" use="optional" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The fixed Zoom for a detector. [units:none] {used:PMT}</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="AmplificationGain" use="optional" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>Gain applied to the detector signal. This is the electronic gain (as apposed to the inherent gain) that is set for the detector. [units:none] {used:EMCCD#EMGain}</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="ID" use="required" type="DetectorID"/>
        <xsd:attribute name="Type" use="optional">
          <xsd:annotation>
            <xsd:documentation>The Type of detector. E.g. CCD, PMT, EMCCD etc.</xsd:documentation>
          </xsd:annotation>
          <xsd:simpleType>
            <xsd:restriction base="xsd:string">
              <xsd:enumeration value="CCD"/>
              <!-- Charge-Coupled Device -->
              <xsd:enumeration value="IntensifiedCCD"/>
              <xsd:enumeration value="AnalogVideo"/>
              <xsd:enumeration value="PMT"/>
              <!-- Photomultiplier tube -->
              <xsd:enumeration value="Photodiode"/>
              <xsd:enumeration value="Spectroscopy"/>
              <xsd:enumeration value="LifetimeImaging"/>
              <xsd:enumeration value="CorrelationSpectroscopy"/>
              <xsd:enumeration value="FTIR"/>
              <!-- Fourier transform infrared spectroscopy -->
              <xsd:enumeration value="EMCCD"/>
              <!-- Electron Multiplying Charge Coupled Device -->
              <xsd:enumeration value="APD"/>
              <!-- Avalanche Photodiode -->
              <xsd:enumeration value="CMOS"/>
              <!-- complementary metal oxide semiconductor -->
              <xsd:enumeration value="EBCCD"/>
              <!-- electron-bombarded charge-coupled device -->
              <xsd:enumeration value="Other"/>
            </xsd:restriction>
          </xsd:simpleType>
        </xsd:attribute>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Objective
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A description of the microscope's objective lens.
Required elements include the lens numerical aperture,
and the magnification, both of which a floating
point (real) numbers.
The values are those that are fixed for a particular
objective: either because it has been manufactured to
this specification or the value has been measured on
this particular objective.
Correction: This is the type of correction coating applied to this lens.
Immersion: This is the types of immersion medium the lens is designed to
work with. It is not the same as 'Medium' in ObjectiveRef (a
single type) as here Immersion can have compound values like 'Multi'.
LensNA: The numerical aperture of the lens (as a float)
NominalMagnification: The specified magnification e.g. x10
CalibratedMagnification: The measured magnification e.g. x10.3
WorkingDistance: WorkingDistance of the lens.
Diagram
Diagram ome_xsd.tmp#ManufacturerSpec_Manufacturer ome_xsd.tmp#ManufacturerSpec_Model ome_xsd.tmp#ManufacturerSpec_SerialNumber ome_xsd.tmp#ManufacturerSpec_LotNumber ome_xsd.tmp#ManufacturerSpec ome_xsd.tmp#Objective_ID ome_xsd.tmp#Objective_Correction ome_xsd.tmp#Objective_Immersion ome_xsd.tmp#Objective_LensNA ome_xsd.tmp#Objective_NominalMagnification ome_xsd.tmp#Objective_CalibratedMagnification ome_xsd.tmp#Objective_WorkingDistance ome_xsd.tmp#Objective_WorkingDistanceUnit ome_xsd.tmp#Objective_Iris ome_xsd.tmp#AnnotationRef
Type extension of ManufacturerSpec
Type hierarchy
Properties
content complex
Used by
Element Instrument
Model
Children AnnotationRef
Instance
<Objective CalibratedMagnification="" Correction="" ID="" Immersion="" Iris="" LensNA="" LotNumber="" Manufacturer="" Model="" NominalMagnification="" SerialNumber="" WorkingDistance="" WorkingDistanceUnit="µm" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Objective>
Attributes
QName Type Default Use Annotation
CalibratedMagnification xsd:float optional
The magnification of the lens as measured by a calibration process- i.e. '59.987' for a 60X lens. [units:none]
Correction restriction of xsd:string optional
The correction applied to the lens
ID ObjectiveID required
Immersion restriction of xsd:string optional
The immersion medium the lens is designed for
Iris xsd:boolean optional
Records whether or not the objective was fitted with an Iris. [flag]
LensNA xsd:float optional
The numerical aperture of the lens expressed as a floating point (real) number.
Expected range 0.02 - 1.5 [units:none]
LotNumber xsd:string optional
The lot number of the component. [plain text string]
Manufacturer xsd:string optional
The manufacturer of the component. [plain text string]
Model xsd:string optional
The Model of the component. [plain text string]
NominalMagnification xsd:float optional
The magnification of the lens as specified by the manufacturer - i.e. '60' is a 60X lens. [units:none]
Note: The type of this has been changed from int to float to allow
the specification of additional lenses e.g. 0.5X lens
SerialNumber xsd:string optional
The serial number of the component. [plain text string]
WorkingDistance xsd:float optional
The working distance of the lens expressed as a floating point (real) number. Units are set by WorkingDistanceUnit.
WorkingDistanceUnit UnitsLength µm optional
The units of the working distance - default:microns[µm].
Source
<xsd:element name="Objective">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Objectives</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>A description of the microscope's objective lens. Required elements include the lens numerical aperture, and the magnification, both of which a floating point (real) numbers. The values are those that are fixed for a particular objective: either because it has been manufactured to this specification or the value has been measured on this particular objective. Correction: This is the type of correction coating applied to this lens. Immersion: This is the types of immersion medium the lens is designed to work with. It is not the same as 'Medium' in ObjectiveRef (a single type) as here Immersion can have compound values like 'Multi'. LensNA: The numerical aperture of the lens (as a float) NominalMagnification: The specified magnification e.g. x10 CalibratedMagnification: The measured magnification e.g. x10.3 WorkingDistance: WorkingDistance of the lens.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="ManufacturerSpec">
        <xsd:sequence>
          <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
            <xsd:annotation>
              <xsd:appinfo>
                <xsdfu xmlns="">
                  <manytomany/>
                </xsdfu>
              </xsd:appinfo>
            </xsd:annotation>
          </xsd:element>
        </xsd:sequence>
        <xsd:attribute name="ID" use="required" type="ObjectiveID"/>
        <xsd:attribute name="Correction" use="optional">
          <xsd:annotation>
            <xsd:documentation>The correction applied to the lens</xsd:documentation>
          </xsd:annotation>
          <xsd:simpleType>
            <xsd:restriction base="xsd:string">
              <xsd:enumeration value="UV"/>
              <xsd:enumeration value="PlanApo"/>
              <xsd:enumeration value="PlanFluor"/>
              <xsd:enumeration value="SuperFluor"/>
              <xsd:enumeration value="VioletCorrected"/>
              <xsd:enumeration value="Achro"/>
              <xsd:enumeration value="Achromat"/>
              <xsd:enumeration value="Fluor"/>
              <xsd:enumeration value="Fl"/>
              <xsd:enumeration value="Fluar"/>
              <xsd:enumeration value="Neofluar"/>
              <xsd:enumeration value="Fluotar"/>
              <xsd:enumeration value="Apo"/>
              <xsd:enumeration value="PlanNeofluar"/>
              <xsd:enumeration value="Other"/>
            </xsd:restriction>
          </xsd:simpleType>
        </xsd:attribute>
        <xsd:attribute name="Immersion" use="optional">
          <xsd:annotation>
            <xsd:documentation>The immersion medium the lens is designed for</xsd:documentation>
          </xsd:annotation>
          <xsd:simpleType>
            <xsd:restriction base="xsd:string">
              <xsd:enumeration value="Oil"/>
              <xsd:enumeration value="Water"/>
              <xsd:enumeration value="WaterDipping"/>
              <xsd:enumeration value="Air"/>
              <xsd:enumeration value="Multi"/>
              <xsd:enumeration value="Glycerol"/>
              <xsd:enumeration value="Other"/>
            </xsd:restriction>
          </xsd:simpleType>
        </xsd:attribute>
        <xsd:attribute name="LensNA" use="optional" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The numerical aperture of the lens expressed as a floating point (real) number. Expected range 0.02 - 1.5 [units:none]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="NominalMagnification" use="optional" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The magnification of the lens as specified by the manufacturer - i.e. '60' is a 60X lens. [units:none] Note: The type of this has been changed from int to float to allow the specification of additional lenses e.g. 0.5X lens</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="CalibratedMagnification" use="optional" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The magnification of the lens as measured by a calibration process- i.e. '59.987' for a 60X lens. [units:none]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="WorkingDistance" use="optional" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The working distance of the lens expressed as a floating point (real) number. Units are set by WorkingDistanceUnit.</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="WorkingDistanceUnit" use="optional" default="µm" type="UnitsLength">
          <xsd:annotation>
            <xsd:documentation>The units of the working distance - default:microns[µm].</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Iris" use="optional" type="xsd:boolean">
          <xsd:annotation>
            <xsd:documentation>Records whether or not the objective was fitted with an Iris. [flag]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element FilterSet
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
Filter set manufacturer specification
Diagram
Diagram ome_xsd.tmp#ManufacturerSpec_Manufacturer ome_xsd.tmp#ManufacturerSpec_Model ome_xsd.tmp#ManufacturerSpec_SerialNumber ome_xsd.tmp#ManufacturerSpec_LotNumber ome_xsd.tmp#ManufacturerSpec ome_xsd.tmp#FilterSet_ID ome_xsd.tmp#FilterSet_ExcitationFilterRef ome_xsd.tmp#DichroicRef ome_xsd.tmp#FilterSet_EmissionFilterRef
Type extension of ManufacturerSpec
Type hierarchy
Properties
content complex
Used by
Element Instrument
Model
Children DichroicRef, EmissionFilterRef, ExcitationFilterRef
Instance
<FilterSet ID="" LotNumber="" Manufacturer="" Model="" SerialNumber="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <ExcitationFilterRef ID="">{0,unbounded}</ExcitationFilterRef>
  <DichroicRef ID="">{0,1}</DichroicRef>
  <EmissionFilterRef ID="">{0,unbounded}</EmissionFilterRef>
</FilterSet>
Attributes
QName Type Use Annotation
ID FilterSetID required
LotNumber xsd:string optional
The lot number of the component. [plain text string]
Manufacturer xsd:string optional
The manufacturer of the component. [plain text string]
Model xsd:string optional
The Model of the component. [plain text string]
SerialNumber xsd:string optional
The serial number of the component. [plain text string]
Source
<xsd:element name="FilterSet">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>FilterSets</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>Filter set manufacturer specification</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="ManufacturerSpec">
        <xsd:sequence>
          <xsd:element name="ExcitationFilterRef" type="FilterRef" minOccurs="0" maxOccurs="unbounded">
            <xsd:annotation>
              <xsd:appinfo>
                <xsdfu xmlns="">
                  <plural>ExcitationFilters</plural>
                  <manytomany/>
                </xsdfu>
              </xsd:appinfo>
              <xsd:documentation>The Filters placed in the Excitation light path.</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
          <xsd:element ref="DichroicRef" minOccurs="0" maxOccurs="1"/>
          <xsd:element name="EmissionFilterRef" type="FilterRef" minOccurs="0" maxOccurs="unbounded">
            <xsd:annotation>
              <xsd:appinfo>
                <xsdfu xmlns="">
                  <plural>EmissionFilters</plural>
                  <manytomany/>
                </xsdfu>
              </xsd:appinfo>
              <xsd:documentation>The Filters placed in the Emission light path.</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
        </xsd:sequence>
        <xsd:attribute name="ID" use="required" type="FilterSetID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element FilterSet / ExcitationFilterRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The Filters placed in the Excitation light path.
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#FilterRef_ID ome_xsd.tmp#FilterRef
Type FilterRef
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Attributes
QName Type Use
ID FilterID required
Source
<xsd:element name="ExcitationFilterRef" type="FilterRef" minOccurs="0" maxOccurs="unbounded">
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>ExcitationFilters</plural>
        <manytomany/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The Filters placed in the Excitation light path.</xsd:documentation>
  </xsd:annotation>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element DichroicRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#DichroicRef_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Used by
Elements FilterSet, LightPath
Attributes
QName Type Use
ID DichroicID required
Source
<xsd:element name="DichroicRef">
  <!-- top level definition -->
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="DichroicID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element FilterSet / EmissionFilterRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The Filters placed in the Emission light path.
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#FilterRef_ID ome_xsd.tmp#FilterRef
Type FilterRef
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Attributes
QName Type Use
ID FilterID required
Source
<xsd:element name="EmissionFilterRef" type="FilterRef" minOccurs="0" maxOccurs="unbounded">
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>EmissionFilters</plural>
        <manytomany/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The Filters placed in the Emission light path.</xsd:documentation>
  </xsd:annotation>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Filter
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A filter is either an excitation or emission filters.
There should be one filter element specified per wavelength in the image.
The channel number associated with a filter set is specified in Channel.
It is based on the FilterSpec type, so has the required attributes Manufacturer, Model, and LotNumber.
It may also contain a Type attribute which may be set to
'LongPass', 'ShortPass', 'BandPass', 'MultiPass',
'Dichroic', 'NeutralDensity', 'Tuneable' or 'Other'.
It can be associated with an optional FilterWheel - Note: this is not the same as a FilterSet
Diagram
Diagram ome_xsd.tmp#ManufacturerSpec_Manufacturer ome_xsd.tmp#ManufacturerSpec_Model ome_xsd.tmp#ManufacturerSpec_SerialNumber ome_xsd.tmp#ManufacturerSpec_LotNumber ome_xsd.tmp#ManufacturerSpec ome_xsd.tmp#Filter_Type ome_xsd.tmp#Filter_FilterWheel ome_xsd.tmp#Filter_ID ome_xsd.tmp#TransmittanceRange ome_xsd.tmp#AnnotationRef
Type extension of ManufacturerSpec
Type hierarchy
Properties
content complex
Used by
Element Instrument
Model
Children AnnotationRef, TransmittanceRange
Instance
<Filter FilterWheel="" ID="" LotNumber="" Manufacturer="" Model="" SerialNumber="" Type="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <TransmittanceRange CutIn="" CutInTolerance="" CutInToleranceUnit="nm" CutInUnit="nm" CutOut="" CutOutTolerance="" CutOutToleranceUnit="nm" CutOutUnit="nm" Transmittance="">{0,1}</TransmittanceRange>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Filter>
Attributes
QName Type Use Annotation
FilterWheel xsd:string optional
A filter 'wheel' in OME can refer to any arrangement of filters in a filter holder of any shape. It could, for example, be a filter slider. [plain text string]
ID FilterID required
LotNumber xsd:string optional
The lot number of the component. [plain text string]
Manufacturer xsd:string optional
The manufacturer of the component. [plain text string]
Model xsd:string optional
The Model of the component. [plain text string]
SerialNumber xsd:string optional
The serial number of the component. [plain text string]
Type restriction of xsd:string optional
Source
<xsd:element name="Filter">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Filters</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>A filter is either an excitation or emission filters. There should be one filter element specified per wavelength in the image. The channel number associated with a filter set is specified in Channel. It is based on the FilterSpec type, so has the required attributes Manufacturer, Model, and LotNumber. It may also contain a Type attribute which may be set to 'LongPass', 'ShortPass', 'BandPass', 'MultiPass', 'Dichroic', 'NeutralDensity', 'Tuneable' or 'Other'. It can be associated with an optional FilterWheel - Note: this is not the same as a FilterSet</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="ManufacturerSpec">
        <xsd:sequence>
          <xsd:element ref="TransmittanceRange" minOccurs="0" maxOccurs="1"/>
          <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
            <xsd:annotation>
              <xsd:appinfo>
                <xsdfu xmlns="">
                  <manytomany/>
                </xsdfu>
              </xsd:appinfo>
            </xsd:annotation>
          </xsd:element>
        </xsd:sequence>
        <xsd:attribute name="Type" use="optional">
          <xsd:simpleType>
            <xsd:restriction base="xsd:string">
              <xsd:enumeration value="Dichroic"/>
              <xsd:enumeration value="LongPass"/>
              <xsd:enumeration value="ShortPass"/>
              <xsd:enumeration value="BandPass"/>
              <xsd:enumeration value="MultiPass"/>
              <xsd:enumeration value="NeutralDensity"/>
              <xsd:enumeration value="Tuneable"/>
              <xsd:enumeration value="Other"/>
            </xsd:restriction>
          </xsd:simpleType>
        </xsd:attribute>
        <xsd:attribute name="FilterWheel" use="optional" type="xsd:string">
          <xsd:annotation>
            <xsd:documentation>A filter 'wheel' in OME can refer to any arrangement of filters in a filter holder of any shape. It could, for example, be a filter slider. [plain text string]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="ID" use="required" type="FilterID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element TransmittanceRange
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This records the range of wavelengths that are transmitted by the filter. It also records the maximum amount of light transmitted.
Diagram
Diagram ome_xsd.tmp#TransmittanceRange_CutIn ome_xsd.tmp#TransmittanceRange_CutInUnit ome_xsd.tmp#TransmittanceRange_CutOut ome_xsd.tmp#TransmittanceRange_CutOutUnit ome_xsd.tmp#TransmittanceRange_CutInTolerance ome_xsd.tmp#TransmittanceRange_CutInToleranceUnit ome_xsd.tmp#TransmittanceRange_CutOutTolerance ome_xsd.tmp#TransmittanceRange_CutOutToleranceUnit ome_xsd.tmp#TransmittanceRange_Transmittance
Properties
content complex
Used by
Element Filter
Attributes
QName Type Default Use Annotation
CutIn PositiveFloat optional
CutIn is the wavelength below which there is less than 50% transmittance for a filter. Units are set by CutInUnit.
CutInTolerance NonNegativeFloat optional
CutInTolerance. Units are set by CutInToleranceUnit.
CutInToleranceUnit UnitsLength nm optional
The units of the CutInTolerance - default:nanometres[nm].
CutInUnit UnitsLength nm optional
The units of the CutIn - default:nanometres[nm].
CutOut PositiveFloat optional
CutOut is the wavelength above which there is less than 50% transmittance for a filter. Units are set by CutOutUnit.
CutOutTolerance NonNegativeFloat optional
CutOutTolerance. Units are set by CutOutToleranceUnit.
CutOutToleranceUnit UnitsLength nm optional
The units of the CutOutTolerance - default:nanometres[nm].
CutOutUnit UnitsLength nm optional
The units of the CutOut - default:nanometres[nm].
Transmittance PercentFraction optional
The amount of light the filter transmits at a maximum [units:none]
A fraction, as a value from 0.0 to 1.0.
Source
<xsd:element name="TransmittanceRange">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>TransmittanceRanges</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>This records the range of wavelengths that are transmitted by the filter. It also records the maximum amount of light transmitted.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:attribute name="CutIn" use="optional" type="PositiveFloat">
      <xsd:annotation>
        <xsd:documentation>CutIn is the wavelength below which there is less than 50% transmittance for a filter. Units are set by CutInUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="CutInUnit" use="optional" default="nm" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the CutIn - default:nanometres[nm].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="CutOut" use="optional" type="PositiveFloat">
      <xsd:annotation>
        <xsd:documentation>CutOut is the wavelength above which there is less than 50% transmittance for a filter. Units are set by CutOutUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="CutOutUnit" use="optional" default="nm" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the CutOut - default:nanometres[nm].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="CutInTolerance" use="optional" type="NonNegativeFloat">
      <xsd:annotation>
        <xsd:documentation>CutInTolerance. Units are set by CutInToleranceUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="CutInToleranceUnit" use="optional" default="nm" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the CutInTolerance - default:nanometres[nm].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="CutOutTolerance" use="optional" type="NonNegativeFloat">
      <xsd:annotation>
        <xsd:documentation>CutOutTolerance. Units are set by CutOutToleranceUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="CutOutToleranceUnit" use="optional" default="nm" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the CutOutTolerance - default:nanometres[nm].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Transmittance" use="optional" type="PercentFraction">
      <xsd:annotation>
        <xsd:documentation>The amount of light the filter transmits at a maximum [units:none] A fraction, as a value from 0.0 to 1.0.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Dichroic
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The dichromatic beamsplitter or dichroic mirror used for this filter combination.
Diagram
Diagram ome_xsd.tmp#ManufacturerSpec_Manufacturer ome_xsd.tmp#ManufacturerSpec_Model ome_xsd.tmp#ManufacturerSpec_SerialNumber ome_xsd.tmp#ManufacturerSpec_LotNumber ome_xsd.tmp#ManufacturerSpec ome_xsd.tmp#Dichroic_ID ome_xsd.tmp#AnnotationRef
Type extension of ManufacturerSpec
Type hierarchy
Properties
content complex
Used by
Element Instrument
Model
Children AnnotationRef
Instance
<Dichroic ID="" LotNumber="" Manufacturer="" Model="" SerialNumber="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Dichroic>
Attributes
QName Type Use Annotation
ID DichroicID required
LotNumber xsd:string optional
The lot number of the component. [plain text string]
Manufacturer xsd:string optional
The manufacturer of the component. [plain text string]
Model xsd:string optional
The Model of the component. [plain text string]
SerialNumber xsd:string optional
The serial number of the component. [plain text string]
Source
<xsd:element name="Dichroic">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Dichroics</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The dichromatic beamsplitter or dichroic mirror used for this filter combination.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="ManufacturerSpec">
        <xsd:sequence>
          <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
            <xsd:annotation>
              <xsd:appinfo>
                <xsdfu xmlns="">
                  <manytomany/>
                </xsdfu>
              </xsd:appinfo>
            </xsd:annotation>
          </xsd:element>
        </xsd:sequence>
        <xsd:attribute name="ID" use="required" type="DichroicID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Image
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This element describes the actual image and its meta-data.
        The elements that are references (ending in Ref or Settings) refer to
        elements defined outside of the Image element. Ref elements are simple
        links, while Settings elements are links with additional values.

        If any of the required Image attributes or elements are missing, its
        guaranteed to be an invalid document. The required attributes and
        elements are ID and Pixels.

        ExperimenterRef is required for all Images with well formed LSIDs.
        ImageType is a vendor-specific designation of the type of image this is.
        Examples of ImageType include 'STK', 'SoftWorx', etc.
        The Name attributes are in all cases the name of the element
        instance. In this case, the name of the image, not necessarily the filename.
        Physical size of pixels are microns[µm].
Diagram
Diagram ome_xsd.tmp#Image_ID ome_xsd.tmp#Image_Name ome_xsd.tmp#Image_AcquisitionDate ome_xsd.tmp#ExperimenterRef ome_xsd.tmp#Image_Description ome_xsd.tmp#ExperimentRef ome_xsd.tmp#ExperimenterGroupRef ome_xsd.tmp#InstrumentRef ome_xsd.tmp#ObjectiveSettings ome_xsd.tmp#ImagingEnvironment ome_xsd.tmp#StageLabel ome_xsd.tmp#Pixels ome_xsd.tmp#ROIRef ome_xsd.tmp#MicrobeamManipulationRef ome_xsd.tmp#AnnotationRef
Properties
content complex
Used by
Element OME
Model
Children AcquisitionDate, AnnotationRef, Description, ExperimentRef, ExperimenterGroupRef, ExperimenterRef, ImagingEnvironment, InstrumentRef, MicrobeamManipulationRef, ObjectiveSettings, Pixels, ROIRef, StageLabel
Instance
<Image ID="" Name="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <AcquisitionDate>{0,1}</AcquisitionDate>
  <ExperimenterRef ID="">{0,1}</ExperimenterRef>
  <Description>{0,1}</Description>
  <ExperimentRef ID="">{0,1}</ExperimentRef>
  <ExperimenterGroupRef ID="">{0,1}</ExperimenterGroupRef>
  <InstrumentRef ID="">{0,1}</InstrumentRef>
  <ObjectiveSettings CorrectionCollar="" ID="" Medium="" RefractiveIndex="">{0,1}</ObjectiveSettings>
  <ImagingEnvironment AirPressure="" AirPressureUnit="mbar" CO2Percent="" Humidity="" Temperature="" TemperatureUnit="°C">{0,1}</ImagingEnvironment>
  <StageLabel Name="" X="" XUnit="reference frame" Y="" YUnit="reference frame" Z="" ZUnit="reference frame">{0,1}</StageLabel>
  <Pixels BigEndian="" DimensionOrder="" ID="" Interleaved="" PhysicalSizeX="" PhysicalSizeXUnit="µm" PhysicalSizeY="" PhysicalSizeYUnit="µm" PhysicalSizeZ="" PhysicalSizeZUnit="µm" SignificantBits="" SizeC="" SizeT="" SizeX="" SizeY="" SizeZ="" TimeIncrement="" TimeIncrementUnit="s" Type="">{1,1}</Pixels>
  <ROIRef ID="">{0,unbounded}</ROIRef>
  <MicrobeamManipulationRef ID="">{0,unbounded}</MicrobeamManipulationRef>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Image>
Attributes
QName Type Use
ID ImageID required
Name xsd:string optional
Source
<xsd:element name="Image">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Images</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>This element describes the actual image and its meta-data. The elements that are references (ending in Ref or Settings) refer to elements defined outside of the Image element. Ref elements are simple links, while Settings elements are links with additional values. If any of the required Image attributes or elements are missing, its guaranteed to be an invalid document. The required attributes and elements are ID and Pixels. ExperimenterRef is required for all Images with well formed LSIDs. ImageType is a vendor-specific designation of the type of image this is. Examples of ImageType include 'STK', 'SoftWorx', etc. The Name attributes are in all cases the name of the element instance. In this case, the name of the image, not necessarily the filename. Physical size of pixels are microns[µm].</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element name="AcquisitionDate" minOccurs="0" maxOccurs="1" type="xsd:dateTime">
        <xsd:annotation>
          <xsd:documentation>The acquisition date of the Image. The element contains an xsd:dateTime string based on the ISO 8601 format (i.e. 1988-04-07T18:39:09.359) YYYY-MM-DDTHH:mm:SS.sssZ Y - Year M - Month D - Day H - Hour m - minutes S - Seconds s - sub-seconds (optional) Z - Zone (optional) +HH:mm or -HH:mm or Z for UTC Note: xsd:dataTime supports a very wide date range with unlimited precision. The full date range and precision are not typically supported by platform- and language-specific libraries. Where the supported time precision is less than the precision used by the xsd:dateTime timestamp there will be loss of precision; this will typically occur via direct truncation or (less commonly) rounding. The year value can be large and/or negative. Any value covering the current or last century should be correctly processed, but some systems cannot process earlier dates. The sub-second value is defined as an unlimited number of digits after the decimal point. In Java a minimum of millisecond precision is guaranteed. In C++ microsecond precision is guaranteed, with nanosecond precision being available on some platforms. Time zones are supported, eg '2013-10-24T11:52:33+01:00' for Paris, but in most cases it will be converted to UTC when the timestamp is written.</xsd:documentation>
        </xsd:annotation>
      </xsd:element>
      <xsd:element ref="ExperimenterRef" minOccurs="0" maxOccurs="1"/>
      <xsd:element name="Description" minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:documentation>A description for the image. [plain-text multi-line string]</xsd:documentation>
        </xsd:annotation>
        <xsd:simpleType>
          <xsd:restriction base="xsd:string">
            <xsd:whiteSpace value="preserve"/>
          </xsd:restriction>
        </xsd:simpleType>
      </xsd:element>
      <xsd:element ref="ExperimentRef" minOccurs="0" maxOccurs="1"/>
      <xsd:element ref="ExperimenterGroupRef" minOccurs="0" maxOccurs="1"/>
      <xsd:element ref="InstrumentRef" minOccurs="0" maxOccurs="1"/>
      <xsd:element ref="ObjectiveSettings" minOccurs="0" maxOccurs="1"/>
      <xsd:element ref="ImagingEnvironment" minOccurs="0" maxOccurs="1"/>
      <xsd:element ref="StageLabel" minOccurs="0" maxOccurs="1"/>
      <xsd:element ref="Pixels" minOccurs="1" maxOccurs="1"/>
      <xsd:element ref="ROIRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
      <xsd:element ref="MicrobeamManipulationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
      <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
    </xsd:sequence>
    <xsd:attribute name="ID" use="required" type="ImageID"/>
    <xsd:attribute name="Name" use="optional" type="xsd:string"/>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Image / AcquisitionDate
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The acquisition date of the Image.
              The element contains an xsd:dateTime string based on the ISO 8601 format (i.e. 1988-04-07T18:39:09.359)

              YYYY-MM-DDTHH:mm:SS.sssZ
              Y - Year
              M - Month
              D - Day
              H - Hour
              m - minutes
              S - Seconds
              s - sub-seconds (optional)
              Z - Zone (optional) +HH:mm or -HH:mm or Z for UTC

              Note: xsd:dataTime supports a very wide date range with unlimited precision. The full date range
              and precision are not typically supported by platform- and language-specific libraries.
              Where the supported time precision is less than the precision used by the xsd:dateTime
              timestamp there will be loss of precision; this will typically occur via direct truncation
              or (less commonly) rounding.

              The year value can be large and/or negative. Any value covering the current or last century
              should be correctly processed, but some systems cannot process earlier dates.

              The sub-second value is defined as an unlimited number of digits after the decimal point.
              In Java a minimum of millisecond precision is guaranteed.
              In C++ microsecond precision is guaranteed, with nanosecond precision being available on
              some platforms.

              Time zones are supported, eg '2013-10-24T11:52:33+01:00' for Paris, but in most cases it will
              be converted to UTC when the timestamp is written.
Diagram
Diagram
Type xsd:dateTime
Properties
content simple
minOccurs 0
maxOccurs 1
Source
<xsd:element name="AcquisitionDate" minOccurs="0" maxOccurs="1" type="xsd:dateTime">
  <xsd:annotation>
    <xsd:documentation>The acquisition date of the Image. The element contains an xsd:dateTime string based on the ISO 8601 format (i.e. 1988-04-07T18:39:09.359) YYYY-MM-DDTHH:mm:SS.sssZ Y - Year M - Month D - Day H - Hour m - minutes S - Seconds s - sub-seconds (optional) Z - Zone (optional) +HH:mm or -HH:mm or Z for UTC Note: xsd:dataTime supports a very wide date range with unlimited precision. The full date range and precision are not typically supported by platform- and language-specific libraries. Where the supported time precision is less than the precision used by the xsd:dateTime timestamp there will be loss of precision; this will typically occur via direct truncation or (less commonly) rounding. The year value can be large and/or negative. Any value covering the current or last century should be correctly processed, but some systems cannot process earlier dates. The sub-second value is defined as an unlimited number of digits after the decimal point. In Java a minimum of millisecond precision is guaranteed. In C++ microsecond precision is guaranteed, with nanosecond precision being available on some platforms. Time zones are supported, eg '2013-10-24T11:52:33+01:00' for Paris, but in most cases it will be converted to UTC when the timestamp is written.</xsd:documentation>
  </xsd:annotation>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Image / Description
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A description for the image. [plain-text multi-line string]
Diagram
Diagram
Type restriction of xsd:string
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
whiteSpace preserve
Source
<xsd:element name="Description" minOccurs="0" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>A description for the image. [plain-text multi-line string]</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:whiteSpace value="preserve"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ExperimentRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#ExperimentRef_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Used by
Element Image
Attributes
QName Type Use
ID ExperimentID required
Source
<xsd:element name="ExperimentRef">
  <!-- top level definition -->
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="ExperimentID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element InstrumentRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This empty element can be used (via the required Instrument ID attribute) to refer to an Instrument defined within OME.
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#InstrumentRef_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Used by
Element Image
Attributes
QName Type Use
ID InstrumentID required
Source
<xsd:element name="InstrumentRef">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:documentation>This empty element can be used (via the required Instrument ID attribute) to refer to an Instrument defined within OME.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="InstrumentID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ObjectiveSettings
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This holds the setting applied to an objective as well as a
reference to the objective.
The ID is the objective used in this case.
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#Settings ome_xsd.tmp#ObjectiveSettings_ID ome_xsd.tmp#ObjectiveSettings_CorrectionCollar ome_xsd.tmp#ObjectiveSettings_Medium ome_xsd.tmp#ObjectiveSettings_RefractiveIndex
Type extension of Settings
Type hierarchy
Properties
content complex
Used by
Element Image
Attributes
QName Type Use Annotation
CorrectionCollar xsd:float optional
The CorrectionCollar is normally an adjustable ring on the
objective. Each has an arbitrary scale on it so the values
is unit-less. [units:none]
ID ObjectiveID required
Medium restriction of xsd:string optional
RefractiveIndex xsd:float optional
The RefractiveIndex is that of the immersion medium. This is
a ratio so it also unit-less. [units:none]
Source
<xsd:element name="ObjectiveSettings">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>ObjectiveSettingsCombinations</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>This holds the setting applied to an objective as well as a reference to the objective. The ID is the objective used in this case.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Settings">
        <xsd:attribute name="ID" use="required" type="ObjectiveID"/>
        <xsd:attribute name="CorrectionCollar" use="optional" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The CorrectionCollar is normally an adjustable ring on the objective. Each has an arbitrary scale on it so the values is unit-less. [units:none]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Medium" use="optional">
          <xsd:simpleType>
            <xsd:annotation>
              <xsd:documentation>A description of a Medium used for the lens. The Medium is the actual immersion medium used in this case.</xsd:documentation>
            </xsd:annotation>
            <xsd:restriction base="xsd:string">
              <xsd:enumeration value="Air"/>
              <xsd:enumeration value="Oil"/>
              <xsd:enumeration value="Water"/>
              <xsd:enumeration value="Glycerol"/>
              <xsd:enumeration value="Other"/>
            </xsd:restriction>
          </xsd:simpleType>
        </xsd:attribute>
        <xsd:attribute name="RefractiveIndex" use="optional" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The RefractiveIndex is that of the immersion medium. This is a ratio so it also unit-less. [units:none]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ImagingEnvironment
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This describes the environment that the biological sample was in
during the experiment.
Diagram
Diagram ome_xsd.tmp#ImagingEnvironment_Temperature ome_xsd.tmp#ImagingEnvironment_TemperatureUnit ome_xsd.tmp#ImagingEnvironment_AirPressure ome_xsd.tmp#ImagingEnvironment_AirPressureUnit ome_xsd.tmp#ImagingEnvironment_Humidity ome_xsd.tmp#ImagingEnvironment_CO2Percent ome_xsd.tmp#ImagingEnvironment_Map
Properties
content complex
Used by
Element Image
Model
Children Map
Instance
<ImagingEnvironment AirPressure="" AirPressureUnit="mbar" CO2Percent="" Humidity="" Temperature="" TemperatureUnit="°C" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Map>{0,1}</Map>
</ImagingEnvironment>
Attributes
QName Type Default Use Annotation
AirPressure xsd:float optional
AirPressure is the define units.
AirPressureUnit UnitsPressure mbar optional
The units the AirPressure is in - default:millibars[mbar].
CO2Percent PercentFraction optional
Carbon Dioxide concentration around the sample [units:none]
A fraction, as a value from 0.0 to 1.0.
Humidity PercentFraction optional
Humidity around the sample [units:none]
A fraction, as a value from 0.0 to 1.0.
Temperature xsd:float optional
The Temperature is the define units.
TemperatureUnit UnitsTemperature °C optional
The units the Temperature is in - default:Celsius[°C].
Source
<xsd:element name="ImagingEnvironment">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>ImagingEnvironments</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>This describes the environment that the biological sample was in during the experiment.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element name="Map" type="Map" minOccurs="0" maxOccurs="1"/>
    </xsd:sequence>
    <xsd:attribute name="Temperature" use="optional" type="xsd:float">
      <xsd:annotation>
        <xsd:documentation>The Temperature is the define units.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="TemperatureUnit" use="optional" default="°C" type="UnitsTemperature">
      <xsd:annotation>
        <xsd:documentation>The units the Temperature is in - default:Celsius[°C].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="AirPressure" use="optional" type="xsd:float">
      <xsd:annotation>
        <xsd:documentation>AirPressure is the define units.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="AirPressureUnit" use="optional" default="mbar" type="UnitsPressure">
      <xsd:annotation>
        <xsd:documentation>The units the AirPressure is in - default:millibars[mbar].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Humidity" use="optional" type="PercentFraction">
      <xsd:annotation>
        <xsd:documentation>Humidity around the sample [units:none] A fraction, as a value from 0.0 to 1.0.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="CO2Percent" use="optional" type="PercentFraction">
      <xsd:annotation>
        <xsd:documentation>Carbon Dioxide concentration around the sample [units:none] A fraction, as a value from 0.0 to 1.0.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ImagingEnvironment / Map
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#Map_M ome_xsd.tmp#Map
Type Map
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children M
Instance
<Map xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <M K="">{0,unbounded}</M>
</Map>
Source
<xsd:element name="Map" type="Map" minOccurs="0" maxOccurs="1"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Map / M
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This is a key/value pair used to build up a Mapping. The
Element and Attribute name are kept to single letters to minimize the
length at the expense of readability as they are likely to occur many
times.
Diagram
Diagram ome_xsd.tmp#Map_Map_M_K
Type extension of xsd:string
Properties
content complex
minOccurs 0
maxOccurs unbounded
Attributes
QName Type Use
K xsd:string optional
Source
<xsd:element name="M" minOccurs="0" maxOccurs="unbounded">
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Ms</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>This is a key/value pair used to build up a Mapping. The Element and Attribute name are kept to single letters to minimize the length at the expense of readability as they are likely to occur many times.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:simpleContent>
      <xsd:extension base="xsd:string">
        <xsd:attribute name="K" type="xsd:string"/>
      </xsd:extension>
    </xsd:simpleContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element StageLabel
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The StageLabel is used to specify a name and position for a stage position in the microscope's reference frame.
Diagram
Diagram ome_xsd.tmp#StageLabel_Name ome_xsd.tmp#StageLabel_X ome_xsd.tmp#StageLabel_XUnit ome_xsd.tmp#StageLabel_Y ome_xsd.tmp#StageLabel_YUnit ome_xsd.tmp#StageLabel_Z ome_xsd.tmp#StageLabel_ZUnit
Properties
content complex
Used by
Element Image
Attributes
QName Type Default Use Annotation
Name xsd:string required
X xsd:float optional
The X position of the stage label. Units are set by XUnit.
XUnit UnitsLength reference frame optional
The units of the X stage position - default:[reference frame].
Y xsd:float optional
The Y position of the stage label. Units are set by YUnit.
YUnit UnitsLength reference frame optional
The units of the Y stage position - default:[reference frame].
Z xsd:float optional
The Z position of the stage label. Units are set by ZUnit.
ZUnit UnitsLength reference frame optional
The units of the Z  stage position - default:[reference frame].
Source
<xsd:element name="StageLabel">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>StageLabels</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The StageLabel is used to specify a name and position for a stage position in the microscope's reference frame.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:attribute name="Name" use="required" type="xsd:string"/>
    <xsd:attribute name="X" use="optional" type="xsd:float">
      <xsd:annotation>
        <xsd:documentation>The X position of the stage label. Units are set by XUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="XUnit" use="optional" default="reference frame" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the X stage position - default:[reference frame].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Y" use="optional" type="xsd:float">
      <xsd:annotation>
        <xsd:documentation>The Y position of the stage label. Units are set by YUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="YUnit" use="optional" default="reference frame" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the Y stage position - default:[reference frame].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Z" use="optional" type="xsd:float">
      <xsd:annotation>
        <xsd:documentation>The Z position of the stage label. Units are set by ZUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="ZUnit" use="optional" default="reference frame" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the Z stage position - default:[reference frame].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Pixels
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
Pixels is going to be removed in the future, but it is still required.

        This is just notice that the contents of Pixels will be
        moved up to Image in a future release. This is because there
        has only been 1 Pixels object in each Image for some time.
        The concept of multiple Pixels sets for one Image failed to
        take off. It is therefore redundant.

        The Image will be unreadable if any of the required Pixel attributes are missing.

        The Pixels themselves can be stored within the OME-XML compressed by plane, and encoded
        in Base64.
        Or the Pixels may be stored in TIFF format.

        The Pixels element should contain a list of BinData or TiffData, each containing a
        single plane of pixels. These Pixels elements, when read in document order,
        must produce a 5-D pixel array of the size specified in this element, and in the
        dimension order specified by 'DimensionOrder'.

        All of the values in the Pixels object when present should match the same value
        stored in any associated TIFF format (e.g. SizeX should be the same). Where there
        is a mismatch our readers will take the value from the TIFF structure as overriding
        the value in the OME-XML. This is simply a pragmatic decision as it increases the
        likelihood of reading data from a slightly incorrect file.
Diagram
Diagram ome_xsd.tmp#Pixels_ID ome_xsd.tmp#Pixels_DimensionOrder ome_xsd.tmp#Pixels_Type ome_xsd.tmp#Pixels_SignificantBits ome_xsd.tmp#Pixels_Interleaved ome_xsd.tmp#Pixels_BigEndian ome_xsd.tmp#Pixels_SizeX ome_xsd.tmp#Pixels_SizeY ome_xsd.tmp#Pixels_SizeZ ome_xsd.tmp#Pixels_SizeC ome_xsd.tmp#Pixels_SizeT ome_xsd.tmp#Pixels_PhysicalSizeX ome_xsd.tmp#Pixels_PhysicalSizeXUnit ome_xsd.tmp#Pixels_PhysicalSizeY ome_xsd.tmp#Pixels_PhysicalSizeYUnit ome_xsd.tmp#Pixels_PhysicalSizeZ ome_xsd.tmp#Pixels_PhysicalSizeZUnit ome_xsd.tmp#Pixels_TimeIncrement ome_xsd.tmp#Pixels_TimeIncrementUnit ome_xsd.tmp#Channel ome_xsd.tmp#BinData ome_xsd.tmp#TiffData ome_xsd.tmp#MetadataOnly ome_xsd.tmp#Plane
Properties
content complex
Used by
Element Image
Model
Children BinData, Channel, MetadataOnly, Plane, TiffData
Instance
<Pixels BigEndian="" DimensionOrder="" ID="" Interleaved="" PhysicalSizeX="" PhysicalSizeXUnit="µm" PhysicalSizeY="" PhysicalSizeYUnit="µm" PhysicalSizeZ="" PhysicalSizeZUnit="µm" SignificantBits="" SizeC="" SizeT="" SizeX="" SizeY="" SizeZ="" TimeIncrement="" TimeIncrementUnit="s" Type="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Channel AcquisitionMode="" Color="-1" ContrastMethod="" EmissionWavelength="" EmissionWavelengthUnit="nm" ExcitationWavelength="" ExcitationWavelengthUnit="nm" Fluor="" ID="" IlluminationType="" Name="" NDFilter="" PinholeSize="" PinholeSizeUnit="µm" PockelCellSetting="" SamplesPerPixel="">{0,unbounded}</Channel>
  <BinData BigEndian="" Compression="none" Length="">{1,unbounded}</BinData>
  <TiffData FirstC="0" FirstT="0" FirstZ="0" IFD="0" PlaneCount="">{1,unbounded}</TiffData>
  <MetadataOnly>{1,1}</MetadataOnly>
  <Plane DeltaT="" DeltaTUnit="s" ExposureTime="" ExposureTimeUnit="s" PositionX="" PositionXUnit="reference frame" PositionY="" PositionYUnit="reference frame" PositionZ="" PositionZUnit="reference frame" TheC="" TheT="" TheZ="">{0,unbounded}</Plane>
</Pixels>
Attributes
QName Type Default Use Annotation
BigEndian xsd:boolean optional
This is true if the pixels data was written in BigEndian order.

            If this value is present it should match the value used in BinData
            or TiffData. If it does not a reader should honour the value used
            in the BinData or TiffData. This values is useful for MetadataOnly
            files and is to allow for future storage solutions.
DimensionOrder restriction of xsd:string required
The order in which the individual planes of data are interleaved.
ID PixelsID required
Interleaved xsd:boolean optional
How the channels are arranged within the data block:
true if channels are stored RGBRGBRGB...;
false if channels are stored RRR...GGG...BBB...
PhysicalSizeX PositiveFloat optional
Physical size of a pixel. Units are set by PhysicalSizeXUnit.
PhysicalSizeXUnit UnitsLength µm optional
The units of the physical size of a pixel - default:microns[µm].
PhysicalSizeY PositiveFloat optional
Physical size of a pixel. Units are set by PhysicalSizeYUnit.
PhysicalSizeYUnit UnitsLength µm optional
The units of the physical size of a pixel - default:microns[µm].
PhysicalSizeZ PositiveFloat optional
Physical size of a pixel. Units are set by PhysicalSizeZUnit.
PhysicalSizeZUnit UnitsLength µm optional
The units of the physical size of a pixel - default:microns[µm].
SignificantBits PositiveInt optional
The number of bits within the type storing each pixel that are significant.
e.g. you can store 12 bit data within a 16 bit type.
This does not reduce the storage requirements but can be a useful indicator
when processing or viewing the image data.
SizeC PositiveInt required
Dimensional size of pixel data array [units:none]
SizeT PositiveInt required
Dimensional size of pixel data array [units:none]
SizeX PositiveInt required
Dimensional size of pixel data array [units:none]
SizeY PositiveInt required
Dimensional size of pixel data array [units:none]
SizeZ PositiveInt required
Dimensional size of pixel data array [units:none]
TimeIncrement xsd:float optional
TimeIncrement is used for time series that have a global
timing specification instead of per-timepoint timing info.
For example in a video stream. Units are set by TimeIncrementUnit.
TimeIncrementUnit UnitsTime s optional
The units of the TimeIncrement - default:seconds[s].
Type PixelType required
The variable type used to represent each pixel in the image.
Source
<xsd:element name="Pixels">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Pixels</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>Pixels is going to be removed in the future, but it is still required. This is just notice that the contents of Pixels will be moved up to Image in a future release. This is because there has only been 1 Pixels object in each Image for some time. The concept of multiple Pixels sets for one Image failed to take off. It is therefore redundant. The Image will be unreadable if any of the required Pixel attributes are missing. The Pixels themselves can be stored within the OME-XML compressed by plane, and encoded in Base64. Or the Pixels may be stored in TIFF format. The Pixels element should contain a list of BinData or TiffData, each containing a single plane of pixels. These Pixels elements, when read in document order, must produce a 5-D pixel array of the size specified in this element, and in the dimension order specified by 'DimensionOrder'. All of the values in the Pixels object when present should match the same value stored in any associated TIFF format (e.g. SizeX should be the same). Where there is a mismatch our readers will take the value from the TIFF structure as overriding the value in the OME-XML. This is simply a pragmatic decision as it increases the likelihood of reading data from a slightly incorrect file.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element ref="Channel" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <ordered/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
      <xsd:choice minOccurs="1" maxOccurs="1">
        <xsd:element ref="BinData" minOccurs="1" maxOccurs="unbounded"/>
        <xsd:element ref="TiffData" minOccurs="1" maxOccurs="unbounded"/>
        <xsd:element ref="MetadataOnly" minOccurs="1" maxOccurs="1"/>
      </xsd:choice>
      <xsd:element ref="Plane" minOccurs="0" maxOccurs="unbounded"/>
    </xsd:sequence>
    <xsd:attribute name="ID" use="required" type="PixelsID"/>
    <xsd:attribute name="DimensionOrder" use="required">
      <xsd:annotation>
        <xsd:documentation>The order in which the individual planes of data are interleaved.</xsd:documentation>
      </xsd:annotation>
      <xsd:simpleType>
        <xsd:restriction base="xsd:string">
          <xsd:enumeration value="XYZCT"/>
          <xsd:enumeration value="XYZTC"/>
          <xsd:enumeration value="XYCTZ"/>
          <xsd:enumeration value="XYCZT"/>
          <xsd:enumeration value="XYTCZ"/>
          <xsd:enumeration value="XYTZC"/>
        </xsd:restriction>
      </xsd:simpleType>
    </xsd:attribute>
    <xsd:attribute name="Type" use="required" type="PixelType">
      <xsd:annotation>
        <xsd:documentation>The variable type used to represent each pixel in the image.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="SignificantBits" use="optional" type="PositiveInt">
      <xsd:annotation>
        <xsd:documentation>The number of bits within the type storing each pixel that are significant. e.g. you can store 12 bit data within a 16 bit type. This does not reduce the storage requirements but can be a useful indicator when processing or viewing the image data.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Interleaved" use="optional" type="xsd:boolean">
      <xsd:annotation>
        <xsd:documentation>How the channels are arranged within the data block: true if channels are stored RGBRGBRGB...; false if channels are stored RRR...GGG...BBB...</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="BigEndian" use="optional" type="xsd:boolean">
      <xsd:annotation>
        <xsd:documentation>This is true if the pixels data was written in BigEndian order. If this value is present it should match the value used in BinData or TiffData. If it does not a reader should honour the value used in the BinData or TiffData. This values is useful for MetadataOnly files and is to allow for future storage solutions.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="SizeX" use="required" type="PositiveInt">
      <xsd:annotation>
        <xsd:documentation>Dimensional size of pixel data array [units:none]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="SizeY" use="required" type="PositiveInt">
      <xsd:annotation>
        <xsd:documentation>Dimensional size of pixel data array [units:none]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="SizeZ" use="required" type="PositiveInt">
      <xsd:annotation>
        <xsd:documentation>Dimensional size of pixel data array [units:none]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="SizeC" use="required" type="PositiveInt">
      <xsd:annotation>
        <xsd:documentation>Dimensional size of pixel data array [units:none]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="SizeT" use="required" type="PositiveInt">
      <xsd:annotation>
        <xsd:documentation>Dimensional size of pixel data array [units:none]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PhysicalSizeX" use="optional" type="PositiveFloat">
      <xsd:annotation>
        <xsd:documentation>Physical size of a pixel. Units are set by PhysicalSizeXUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PhysicalSizeXUnit" use="optional" default="µm" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the physical size of a pixel - default:microns[µm].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PhysicalSizeY" use="optional" type="PositiveFloat">
      <xsd:annotation>
        <xsd:documentation>Physical size of a pixel. Units are set by PhysicalSizeYUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PhysicalSizeYUnit" use="optional" default="µm" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the physical size of a pixel - default:microns[µm].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PhysicalSizeZ" use="optional" type="PositiveFloat">
      <xsd:annotation>
        <xsd:documentation>Physical size of a pixel. Units are set by PhysicalSizeZUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PhysicalSizeZUnit" use="optional" default="µm" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the physical size of a pixel - default:microns[µm].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="TimeIncrement" use="optional" type="xsd:float">
      <xsd:annotation>
        <xsd:documentation>TimeIncrement is used for time series that have a global timing specification instead of per-timepoint timing info. For example in a video stream. Units are set by TimeIncrementUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="TimeIncrementUnit" use="optional" default="s" type="UnitsTime">
      <xsd:annotation>
        <xsd:documentation>The units of the TimeIncrement - default:seconds[s].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Channel
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
There must be one per channel in the Image, even for a single-plane image.
And information about how each of them was acquired is stored in the various optional *Ref elements.  Each Logical Channel is composed of one or more
ChannelComponents.  For example, an entire spectrum in an FTIR experiment may be stored in a single Logical Channel with each discrete wavenumber of the spectrum
constituting a ChannelComponent of the FTIR Logical Channel.  An RGB image where the Red, Green and Blue components do not reflect discrete probes but are
instead the output of a color camera would be treated similarly - one Logical channel with three ChannelComponents in this case.
The total number of ChannelComponents for a set of pixels must equal SizeC.
The IlluminationType attribute is a string enumeration which may be set to 'Transmitted', 'Epifluorescence', 'Oblique', or 'NonLinear'.
The user interface logic for labeling a given channel for the user should use the first existing attribute in the following sequence:
Name -> Fluor -> EmissionWavelength -> ChannelComponent/Index.
Diagram
Diagram ome_xsd.tmp#Channel_ID ome_xsd.tmp#Channel_Name ome_xsd.tmp#Channel_SamplesPerPixel ome_xsd.tmp#Channel_IlluminationType ome_xsd.tmp#Channel_PinholeSize ome_xsd.tmp#Channel_PinholeSizeUnit ome_xsd.tmp#Channel_AcquisitionMode ome_xsd.tmp#Channel_ContrastMethod ome_xsd.tmp#Channel_ExcitationWavelength ome_xsd.tmp#Channel_ExcitationWavelengthUnit ome_xsd.tmp#Channel_EmissionWavelength ome_xsd.tmp#Channel_EmissionWavelengthUnit ome_xsd.tmp#Channel_Fluor ome_xsd.tmp#Channel_NDFilter ome_xsd.tmp#Channel_PockelCellSetting ome_xsd.tmp#Channel_Color ome_xsd.tmp#LightSourceSettings ome_xsd.tmp#DetectorSettings ome_xsd.tmp#FilterSetRef ome_xsd.tmp#AnnotationRef ome_xsd.tmp#LightPath
Properties
content complex
Used by
Element Pixels
Model
Children AnnotationRef, DetectorSettings, FilterSetRef, LightPath, LightSourceSettings
Instance
<Channel AcquisitionMode="" Color="-1" ContrastMethod="" EmissionWavelength="" EmissionWavelengthUnit="nm" ExcitationWavelength="" ExcitationWavelengthUnit="nm" Fluor="" ID="" IlluminationType="" Name="" NDFilter="" PinholeSize="" PinholeSizeUnit="µm" PockelCellSetting="" SamplesPerPixel="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <LightSourceSettings Attenuation="" ID="" Wavelength="" WavelengthUnit="nm">{0,1}</LightSourceSettings>
  <DetectorSettings Binning="" Gain="" ID="" Integration="" Offset="" ReadOutRate="" ReadOutRateUnit="MHz" Voltage="" VoltageUnit="V" Zoom="">{0,1}</DetectorSettings>
  <FilterSetRef ID="">{0,1}</FilterSetRef>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
  <LightPath>{0,1}</LightPath>
</Channel>
Attributes
QName Type Default Use Annotation
AcquisitionMode restriction of xsd:string optional
AcquisitionMode describes the type of microscopy performed for each channel
Color Color -1 optional
A color used to render this channel - encoded as RGBA
The default value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
ContrastMethod restriction of xsd:string optional
ContrastMethod describes the technique used to achieve contrast for each channel
EmissionWavelength PositiveFloat optional
Wavelength of emission for a particular channel. Units are set by EmissionWavelengthUnit.
EmissionWavelengthUnit UnitsLength nm optional
The units of the wavelength of emission - default:nanometres[nm].
ExcitationWavelength PositiveFloat optional
Wavelength of excitation for a particular channel. Units are set by ExcitationWavelengthUnit.
ExcitationWavelengthUnit UnitsLength nm optional
The units of the wavelength of excitation - default:nanometres[nm].
Fluor xsd:string optional
The Fluor attribute is used for fluorescence images.
This is the name of the fluorophore used to produce this channel [plain text string]
ID ChannelID required
IlluminationType restriction of xsd:string optional
The method of illumination used to capture the channel.
NDFilter xsd:float optional
The NDfilter attribute is used to specify the combined effect of any neutral density filters used.
            The amount of light the filter transmits at a maximum [units:none]
            A fraction, as a value from 0.0 to 1.0.

            NOTE: This was formerly described as "units optical density expressed as a PercentFraction".
            This was how the field had been described in the schema from the beginning but all
            the use of it has been in the opposite direction, i.e. as a amount transmitted,
            not the amount blocked. This change has been made to make the model reflect this usage.
Name xsd:string optional
A name for the channel that is suitable for presentation to the user.
PinholeSize xsd:float optional
The optional PinholeSize attribute allows specifying adjustable
pin hole diameters for confocal microscopes. Units are set by PinholeSizeUnit.
PinholeSizeUnit UnitsLength µm optional
The units of the pin hole diameter for confocal microscopes - default:microns[µm].
PockelCellSetting xsd:int optional
The PockelCellSetting used for this channel. This is the amount the polarization of the beam is rotated by. [units:none]
SamplesPerPixel PositiveInt optional
The number of samples the detector takes to form each pixel value. [units:none]
Note: This is not the same as "Frame Averaging" - see Integration in DetectorSettings
Source
<xsd:element name="Channel">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Channels</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>There must be one per channel in the Image, even for a single-plane image. And information about how each of them was acquired is stored in the various optional *Ref elements. Each Logical Channel is composed of one or more ChannelComponents. For example, an entire spectrum in an FTIR experiment may be stored in a single Logical Channel with each discrete wavenumber of the spectrum constituting a ChannelComponent of the FTIR Logical Channel. An RGB image where the Red, Green and Blue components do not reflect discrete probes but are instead the output of a color camera would be treated similarly - one Logical channel with three ChannelComponents in this case. The total number of ChannelComponents for a set of pixels must equal SizeC. The IlluminationType attribute is a string enumeration which may be set to 'Transmitted', 'Epifluorescence', 'Oblique', or 'NonLinear'. The user interface logic for labeling a given channel for the user should use the first existing attribute in the following sequence: Name -> Fluor -> EmissionWavelength -> ChannelComponent/Index.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element ref="LightSourceSettings" minOccurs="0" maxOccurs="1"/>
      <xsd:element ref="DetectorSettings" minOccurs="0" maxOccurs="1"/>
      <xsd:element ref="FilterSetRef" minOccurs="0" maxOccurs="1"/>
      <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
      <xsd:element ref="LightPath" minOccurs="0" maxOccurs="1"/>
    </xsd:sequence>
    <xsd:attribute name="ID" use="required" type="ChannelID"/>
    <xsd:attribute name="Name" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>A name for the channel that is suitable for presentation to the user.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="SamplesPerPixel" use="optional" type="PositiveInt">
      <xsd:annotation>
        <xsd:documentation>The number of samples the detector takes to form each pixel value. [units:none] Note: This is not the same as "Frame Averaging" - see Integration in DetectorSettings</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="IlluminationType" use="optional">
      <xsd:annotation>
        <xsd:documentation>The method of illumination used to capture the channel.</xsd:documentation>
      </xsd:annotation>
      <xsd:simpleType>
        <xsd:restriction base="xsd:string">
          <xsd:enumeration value="Transmitted"/>
          <xsd:enumeration value="Epifluorescence"/>
          <xsd:enumeration value="Oblique"/>
          <xsd:enumeration value="NonLinear"/>
          <xsd:enumeration value="Other"/>
        </xsd:restriction>
      </xsd:simpleType>
    </xsd:attribute>
    <xsd:attribute name="PinholeSize" use="optional" type="xsd:float">
      <xsd:annotation>
        <xsd:documentation>The optional PinholeSize attribute allows specifying adjustable pin hole diameters for confocal microscopes. Units are set by PinholeSizeUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PinholeSizeUnit" use="optional" default="µm" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the pin hole diameter for confocal microscopes - default:microns[µm].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="AcquisitionMode" use="optional">
      <xsd:annotation>
        <xsd:documentation>AcquisitionMode describes the type of microscopy performed for each channel</xsd:documentation>
      </xsd:annotation>
      <xsd:simpleType>
        <xsd:restriction base="xsd:string">
          <xsd:enumeration value="WideField"/>
          <xsd:enumeration value="LaserScanningConfocalMicroscopy"/>
          <!-- CLSM or LSCM -->
          <xsd:enumeration value="SpinningDiskConfocal"/>
          <xsd:enumeration value="SlitScanConfocal"/>
          <xsd:enumeration value="MultiPhotonMicroscopy"/>
          <!-- laser scanning multiphoton microscopy (LSMM), two photon microscopy -->
          <xsd:enumeration value="StructuredIllumination"/>
          <xsd:enumeration value="SingleMoleculeImaging"/>
          <xsd:enumeration value="TotalInternalReflection"/>
          <xsd:enumeration value="FluorescenceLifetime"/>
          <xsd:enumeration value="SpectralImaging"/>
          <xsd:enumeration value="FluorescenceCorrelationSpectroscopy"/>
          <xsd:enumeration value="NearFieldScanningOpticalMicroscopy"/>
          <!-- NSOM -->
          <xsd:enumeration value="SecondHarmonicGenerationImaging"/>
          <!-- Second harmonic imaging microscopy (SHIM) -->
          <xsd:enumeration value="PALM"/>
          <!-- photo-activated localization microscopy, photo-activation localization microscopy -->
          <xsd:enumeration value="STORM"/>
          <!-- stochastic optical reconstruction microscopy -->
          <xsd:enumeration value="STED"/>
          <!-- stimulated emission depletion -->
          <xsd:enumeration value="TIRF"/>
          <!-- total internal reflection fluorescence (TIRFM) -->
          <xsd:enumeration value="FSM"/>
          <!-- Fluorescence speckle microscopy -->
          <xsd:enumeration value="LCM"/>
          <!-- Laser capture microdissection -->
          <xsd:enumeration value="Other"/>
          <xsd:enumeration value="BrightField"/>
          <xsd:enumeration value="SweptFieldConfocal"/>
          <xsd:enumeration value="SPIM"/>
          <!-- Selective or Single Plane Illumination Microscopy -->
        </xsd:restriction>
      </xsd:simpleType>
    </xsd:attribute>
    <xsd:attribute name="ContrastMethod" use="optional">
      <xsd:annotation>
        <xsd:documentation>ContrastMethod describes the technique used to achieve contrast for each channel</xsd:documentation>
      </xsd:annotation>
      <xsd:simpleType>
        <xsd:restriction base="xsd:string">
          <xsd:enumeration value="Brightfield"/>
          <xsd:enumeration value="Phase"/>
          <xsd:enumeration value="DIC"/>
          <!-- Differential Interference Contrast -->
          <xsd:enumeration value="HoffmanModulation"/>
          <!-- Hoffman Modulation Contrast (HMC) -->
          <xsd:enumeration value="ObliqueIllumination"/>
          <xsd:enumeration value="PolarizedLight"/>
          <!-- Polarization Microscopy -->
          <xsd:enumeration value="Darkfield"/>
          <!-- Dark Field Imaging -->
          <xsd:enumeration value="Fluorescence"/>
          <xsd:enumeration value="Other"/>
        </xsd:restriction>
      </xsd:simpleType>
    </xsd:attribute>
    <xsd:attribute name="ExcitationWavelength" use="optional" type="PositiveFloat">
      <xsd:annotation>
        <xsd:documentation>Wavelength of excitation for a particular channel. Units are set by ExcitationWavelengthUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="ExcitationWavelengthUnit" use="optional" default="nm" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the wavelength of excitation - default:nanometres[nm].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="EmissionWavelength" use="optional" type="PositiveFloat">
      <xsd:annotation>
        <xsd:documentation>Wavelength of emission for a particular channel. Units are set by EmissionWavelengthUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="EmissionWavelengthUnit" use="optional" default="nm" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the wavelength of emission - default:nanometres[nm].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Fluor" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>The Fluor attribute is used for fluorescence images. This is the name of the fluorophore used to produce this channel [plain text string]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="NDFilter" use="optional" type="xsd:float">
      <xsd:annotation>
        <xsd:documentation>The NDfilter attribute is used to specify the combined effect of any neutral density filters used. The amount of light the filter transmits at a maximum [units:none] A fraction, as a value from 0.0 to 1.0. NOTE: This was formerly described as "units optical density expressed as a PercentFraction". This was how the field had been described in the schema from the beginning but all the use of it has been in the opposite direction, i.e. as a amount transmitted, not the amount blocked. This change has been made to make the model reflect this usage.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PockelCellSetting" use="optional" type="xsd:int">
      <xsd:annotation>
        <xsd:documentation>The PockelCellSetting used for this channel. This is the amount the polarization of the beam is rotated by. [units:none]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Color" use="optional" type="Color" default="-1">
      <xsd:annotation>
        <xsd:documentation>A color used to render this channel - encoded as RGBA The default value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value) NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element DetectorSettings
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This holds the setting applied to a detector as well as a
        reference to the detector.
        The ID is the detector used in this case.
        The values stored in DetectorSettings represent the variable values,
        fixed values not modified during the acquisition go in Detector.

        Each attribute now has an indication of what type of detector
        it applies to. This is preparatory work for cleaning up and
        possibly splitting this object into sub-types.
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#Settings ome_xsd.tmp#DetectorSettings_ID ome_xsd.tmp#DetectorSettings_Offset ome_xsd.tmp#DetectorSettings_Gain ome_xsd.tmp#DetectorSettings_Voltage ome_xsd.tmp#DetectorSettings_VoltageUnit ome_xsd.tmp#DetectorSettings_Zoom ome_xsd.tmp#DetectorSettings_ReadOutRate ome_xsd.tmp#DetectorSettings_ReadOutRateUnit ome_xsd.tmp#DetectorSettings_Binning ome_xsd.tmp#DetectorSettings_Integration
Type extension of Settings
Type hierarchy
Properties
content complex
Used by
Element Channel
Attributes
QName Type Default Use Annotation
Binning Binning optional
Represents the number of pixels that are combined to form larger pixels. {used:CCD,EMCCD}
Gain xsd:float optional
The Gain of the detector. [units:none] {used:CCD,EMCCD,PMT}
ID DetectorID required
Integration PositiveInt optional
This is the number of sequential frames that get averaged,
to improve the signal-to-noise ratio. [units:none] {used:CCD,EMCCD}
Offset xsd:float optional
The Offset of the detector. [units none] {used:CCD,EMCCD}
ReadOutRate xsd:float optional
The speed at which the detector can count pixels.  {used:CCD,EMCCD}
This is the bytes per second that
can be read from the detector (like a baud rate).
Units are set by ReadOutRateUnit.
ReadOutRateUnit UnitsFrequency MHz optional
The units of the ReadOutRate - default:megahertz[Hz].
Voltage xsd:float optional
The Voltage of the detector. {used:PMT}
Units are set by VoltageUnit.
VoltageUnit UnitsElectricPotential V optional
The units of the Voltage of the detector - default:volts[V]
Zoom xsd:float optional
The Zoom or "Confocal Zoom" or "Scan Zoom" for a detector. [units:none] {used:PMT}
Source
<xsd:element name="DetectorSettings">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>DetectorSettingsCombinations</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>This holds the setting applied to a detector as well as a reference to the detector. The ID is the detector used in this case. The values stored in DetectorSettings represent the variable values, fixed values not modified during the acquisition go in Detector. Each attribute now has an indication of what type of detector it applies to. This is preparatory work for cleaning up and possibly splitting this object into sub-types.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Settings">
        <xsd:attribute name="ID" use="required" type="DetectorID"/>
        <xsd:attribute name="Offset" use="optional" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The Offset of the detector. [units none] {used:CCD,EMCCD}</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Gain" use="optional" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The Gain of the detector. [units:none] {used:CCD,EMCCD,PMT}</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Voltage" use="optional" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The Voltage of the detector. {used:PMT} Units are set by VoltageUnit.</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="VoltageUnit" use="optional" default="V" type="UnitsElectricPotential">
          <xsd:annotation>
            <xsd:documentation>The units of the Voltage of the detector - default:volts[V]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Zoom" use="optional" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The Zoom or "Confocal Zoom" or "Scan Zoom" for a detector. [units:none] {used:PMT}</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="ReadOutRate" use="optional" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The speed at which the detector can count pixels. {used:CCD,EMCCD} This is the bytes per second that can be read from the detector (like a baud rate). Units are set by ReadOutRateUnit.</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="ReadOutRateUnit" use="optional" default="MHz" type="UnitsFrequency">
          <xsd:annotation>
            <xsd:documentation>The units of the ReadOutRate - default:megahertz[Hz].</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Binning" use="optional" type="Binning">
          <xsd:annotation>
            <xsd:documentation>Represents the number of pixels that are combined to form larger pixels. {used:CCD,EMCCD}</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Integration" use="optional" type="PositiveInt">
          <xsd:annotation>
            <xsd:documentation>This is the number of sequential frames that get averaged, to improve the signal-to-noise ratio. [units:none] {used:CCD,EMCCD}</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element FilterSetRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#FilterSetRef_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Used by
Element Channel
Attributes
QName Type Use
ID FilterSetID required
Source
<xsd:element name="FilterSetRef">
  <!-- top level definition -->
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="FilterSetID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element LightPath
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A description of the light path
Diagram
Diagram ome_xsd.tmp#LightPath_ExcitationFilterRef ome_xsd.tmp#DichroicRef ome_xsd.tmp#LightPath_EmissionFilterRef ome_xsd.tmp#AnnotationRef
Properties
content complex
Used by
Element Channel
Model
Children AnnotationRef, DichroicRef, EmissionFilterRef, ExcitationFilterRef
Instance
<LightPath xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <ExcitationFilterRef ID="">{0,unbounded}</ExcitationFilterRef>
  <DichroicRef ID="">{0,1}</DichroicRef>
  <EmissionFilterRef ID="">{0,unbounded}</EmissionFilterRef>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</LightPath>
Source
<xsd:element name="LightPath">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>LightPaths</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>A description of the light path</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element name="ExcitationFilterRef" type="FilterRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <plural>ExcitationFilters</plural>
              <parentordered/>
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
          <xsd:documentation>The Filters placed in the Excitation light path.</xsd:documentation>
        </xsd:annotation>
      </xsd:element>
      <xsd:element ref="DichroicRef" minOccurs="0" maxOccurs="1"/>
      <xsd:element name="EmissionFilterRef" type="FilterRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <plural>EmissionFilters</plural>
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
          <xsd:documentation>The Filters placed in the Emission light path.</xsd:documentation>
        </xsd:annotation>
      </xsd:element>
      <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
    </xsd:sequence>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element LightPath / ExcitationFilterRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The Filters placed in the Excitation light path.
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#FilterRef_ID ome_xsd.tmp#FilterRef
Type FilterRef
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Attributes
QName Type Use
ID FilterID required
Source
<xsd:element name="ExcitationFilterRef" type="FilterRef" minOccurs="0" maxOccurs="unbounded">
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>ExcitationFilters</plural>
        <parentordered/>
        <manytomany/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The Filters placed in the Excitation light path.</xsd:documentation>
  </xsd:annotation>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element LightPath / EmissionFilterRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The Filters placed in the Emission light path.
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#FilterRef_ID ome_xsd.tmp#FilterRef
Type FilterRef
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs unbounded
Attributes
QName Type Use
ID FilterID required
Source
<xsd:element name="EmissionFilterRef" type="FilterRef" minOccurs="0" maxOccurs="unbounded">
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>EmissionFilters</plural>
        <manytomany/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The Filters placed in the Emission light path.</xsd:documentation>
  </xsd:annotation>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element BinData
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The contents of this element are base64-encoded.  These are not CDATA sections, just a base64 stream.
Diagram
Diagram ome_xsd.tmp#base64Binary ome_xsd.tmp#BinData_Compression ome_xsd.tmp#BinData_BigEndian ome_xsd.tmp#BinData_Length
Type extension of base64Binary
Type hierarchy
Properties
content complex
Used by
Elements BinaryFile, Mask, Pixels
Attributes
QName Type Default Use Annotation
BigEndian xsd:boolean required
This is true if the binary data was written in BigEndian order. This is dependent on the system architecture of the machine that wrote the pixels. True for essentially all modern CPUs other than Intel and Alpha. All Binary data must be written in the same endian order.
Compression restriction of xsd:string none optional
Specifies the compression scheme used to encode the data.
Length NonNegativeLong required
Character count attribute for the BinData field. This is the length of the base-64 encoded block. It allows easy skipping of the block when parsing the file. [unit:bytes]
Source
<xsd:element name="BinData">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>BinDataBlocks</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The contents of this element are base64-encoded. These are not CDATA sections, just a base64 stream.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:simpleContent>
      <xsd:extension base="base64Binary">
        <xsd:attribute name="Compression" default="none" use="optional">
          <xsd:annotation>
            <xsd:documentation>Specifies the compression scheme used to encode the data.</xsd:documentation>
          </xsd:annotation>
          <xsd:simpleType>
            <xsd:restriction base="xsd:string">
              <xsd:enumeration value="zlib"/>
              <xsd:enumeration value="bzip2"/>
              <xsd:enumeration value="none"/>
            </xsd:restriction>
          </xsd:simpleType>
        </xsd:attribute>
        <xsd:attribute name="BigEndian" use="required" type="xsd:boolean">
          <xsd:annotation>
            <xsd:documentation>This is true if the binary data was written in BigEndian order. This is dependent on the system architecture of the machine that wrote the pixels. True for essentially all modern CPUs other than Intel and Alpha. All Binary data must be written in the same endian order.</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Length" use="required">
          <xsd:annotation>
            <xsd:documentation>Character count attribute for the BinData field. This is the length of the base-64 encoded block. It allows easy skipping of the block when parsing the file. [unit:bytes]</xsd:documentation>
          </xsd:annotation>
          <xsd:simpleType>
            <xsd:restriction base="NonNegativeLong">
            </xsd:restriction>
          </xsd:simpleType>
        </xsd:attribute>
      </xsd:extension>
    </xsd:simpleContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element TiffData
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This described the location of the pixel data in a tiff file.
Diagram
Diagram ome_xsd.tmp#TiffData_IFD ome_xsd.tmp#TiffData_FirstZ ome_xsd.tmp#TiffData_FirstT ome_xsd.tmp#TiffData_FirstC ome_xsd.tmp#TiffData_PlaneCount ome_xsd.tmp#TiffData_UUID
Properties
content complex
Used by
Element Pixels
Model
Children UUID
Instance
<TiffData FirstC="0" FirstT="0" FirstZ="0" IFD="0" PlaneCount="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <UUID FileName="">{0,1}</UUID>
</TiffData>
Attributes
QName Type Default Use Annotation
FirstC NonNegativeInt 0 optional
Gives the C position of the image plane at the specified IFD. Indexed from 0.
Default is 0 (the first C position). [units:none]
FirstT NonNegativeInt 0 optional
Gives the T position of the image plane at the specified IFD. Indexed from 0.
Default is 0 (the first T position). [units:none]
FirstZ NonNegativeInt 0 optional
Gives the Z position of the image plane at the specified IFD. Indexed from 0.
Default is 0 (the first Z position). [units:none]
IFD NonNegativeInt 0 optional
Gives the IFD(s) for which this element is applicable. Indexed from 0.
Default is 0 (the first IFD). [units:none]
PlaneCount NonNegativeInt optional
Gives the number of IFDs affected. Dimension order of IFDs is given by the enclosing
Pixels element's DimensionOrder attribute. Default is the number of IFDs in the TIFF
file, unless an IFD is specified, in which case the default is 1. [units:none]
Source
<xsd:element name="TiffData">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>TiffDataBlocks</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>This described the location of the pixel data in a tiff file.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element name="UUID" minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:documentation>This must be used when the IFDs are located in another file. Note: It is permissible for this to be self referential.</xsd:documentation>
        </xsd:annotation>
        <xsd:complexType>
          <xsd:simpleContent>
            <xsd:extension base="UniversallyUniqueIdentifier">
              <xsd:attribute name="FileName" use="optional" type="xsd:string">
                <xsd:annotation>
                  <xsd:documentation>This can be used when the IFDs are located in another file. The / (forward slash) is used as the path separator. A relative path is recommended. However an absolute path can be specified. Default is to use the file the ome-xml data has been pulled from. Note: It is permissible for this to be self referential. The file image1.tiff may contain ome-xml data that has FilePath="image1.tiff" or "./image1.tiff"</xsd:documentation>
                </xsd:annotation>
              </xsd:attribute>
            </xsd:extension>
          </xsd:simpleContent>
        </xsd:complexType>
      </xsd:element>
    </xsd:sequence>
    <xsd:attribute name="IFD" type="NonNegativeInt" default="0" use="optional">
      <xsd:annotation>
        <xsd:documentation>Gives the IFD(s) for which this element is applicable. Indexed from 0. Default is 0 (the first IFD). [units:none]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="FirstZ" type="NonNegativeInt" default="0" use="optional">
      <xsd:annotation>
        <xsd:documentation>Gives the Z position of the image plane at the specified IFD. Indexed from 0. Default is 0 (the first Z position). [units:none]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="FirstT" type="NonNegativeInt" default="0" use="optional">
      <xsd:annotation>
        <xsd:documentation>Gives the T position of the image plane at the specified IFD. Indexed from 0. Default is 0 (the first T position). [units:none]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="FirstC" type="NonNegativeInt" default="0" use="optional">
      <xsd:annotation>
        <xsd:documentation>Gives the C position of the image plane at the specified IFD. Indexed from 0. Default is 0 (the first C position). [units:none]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PlaneCount" use="optional" type="NonNegativeInt">
      <xsd:annotation>
        <xsd:documentation>Gives the number of IFDs affected. Dimension order of IFDs is given by the enclosing Pixels element's DimensionOrder attribute. Default is the number of IFDs in the TIFF file, unless an IFD is specified, in which case the default is 1. [units:none]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element TiffData / UUID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This must be used when the IFDs are located in another file.
Note: It is permissible for this to be self referential.
Diagram
Diagram ome_xsd.tmp#UniversallyUniqueIdentifier ome_xsd.tmp#TiffData_TiffData_UUID_FileName
Type extension of UniversallyUniqueIdentifier
Type hierarchy
Properties
content complex
minOccurs 0
maxOccurs 1
Attributes
QName Type Use Annotation
FileName xsd:string optional
This can be used when the IFDs are located in another file.
The / (forward slash) is used as the path separator.
A relative path is recommended. However an absolute path can be specified.
Default is to use the file the ome-xml data has been pulled from.
Note: It is permissible for this to be self referential. The file image1.tiff
may contain ome-xml data that has FilePath="image1.tiff" or "./image1.tiff"
Source
<xsd:element name="UUID" minOccurs="0" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>This must be used when the IFDs are located in another file. Note: It is permissible for this to be self referential.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:simpleContent>
      <xsd:extension base="UniversallyUniqueIdentifier">
        <xsd:attribute name="FileName" use="optional" type="xsd:string">
          <xsd:annotation>
            <xsd:documentation>This can be used when the IFDs are located in another file. The / (forward slash) is used as the path separator. A relative path is recommended. However an absolute path can be specified. Default is to use the file the ome-xml data has been pulled from. Note: It is permissible for this to be self referential. The file image1.tiff may contain ome-xml data that has FilePath="image1.tiff" or "./image1.tiff"</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
      </xsd:extension>
    </xsd:simpleContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element MetadataOnly
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This place holder means there is on pixel data in this file.
Diagram
Diagram
Used by
Element Pixels
Source
<xsd:element name="MetadataOnly">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>MetadataOnlyMarkers</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>This place holder means there is on pixel data in this file.</xsd:documentation>
  </xsd:annotation>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Plane
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The Plane object holds microscope stage and image timing data
for a given channel/z-section/timepoint.
Diagram
Diagram ome_xsd.tmp#Plane_TheZ ome_xsd.tmp#Plane_TheT ome_xsd.tmp#Plane_TheC ome_xsd.tmp#Plane_DeltaT ome_xsd.tmp#Plane_DeltaTUnit ome_xsd.tmp#Plane_ExposureTime ome_xsd.tmp#Plane_ExposureTimeUnit ome_xsd.tmp#Plane_PositionX ome_xsd.tmp#Plane_PositionXUnit ome_xsd.tmp#Plane_PositionY ome_xsd.tmp#Plane_PositionYUnit ome_xsd.tmp#Plane_PositionZ ome_xsd.tmp#Plane_PositionZUnit ome_xsd.tmp#Plane_HashSHA1 ome_xsd.tmp#AnnotationRef
Properties
content complex
Used by
Element Pixels
Model
Children AnnotationRef, HashSHA1
Instance
<Plane DeltaT="" DeltaTUnit="s" ExposureTime="" ExposureTimeUnit="s" PositionX="" PositionXUnit="reference frame" PositionY="" PositionYUnit="reference frame" PositionZ="" PositionZUnit="reference frame" TheC="" TheT="" TheZ="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <HashSHA1>{1,1}</HashSHA1>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Plane>
Attributes
QName Type Default Use Annotation
DeltaT xsd:float optional
Time since the beginning of the experiment.
Units are set by DeltaTUnit.
DeltaTUnit UnitsTime s optional
The units of the DeltaT - default:seconds[s].
ExposureTime xsd:float optional
The length of the exposure.
Units are set by ExposureTimeUnit.
ExposureTimeUnit UnitsTime s optional
The units of the ExposureTime - default:seconds[s].
PositionX xsd:float optional
The X position of the stage. Units are set by PositionXUnit.
PositionXUnit UnitsLength reference frame optional
The units of the X stage position - default:[reference frame].
PositionY xsd:float optional
The Y position of the stage. Units are set by PositionYUnit.
PositionYUnit UnitsLength reference frame optional
The units of the Y stage position - default:[reference frame].
PositionZ xsd:float optional
The Z position of the stage. Units are set by PositionZUnit.
PositionZUnit UnitsLength reference frame optional
The units of the Z stage position - default:[reference frame].
TheC NonNegativeInt required
The channel this plane is for. [units:none]
This is numbered from 0.
TheT NonNegativeInt required
The timepoint this plane is for. [units:none]
This is numbered from 0.
TheZ NonNegativeInt required
The Z-section this plane is for. [units:none]
This is numbered from 0.
Source
<xsd:element name="Plane">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Planes</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The Plane object holds microscope stage and image timing data for a given channel/z-section/timepoint.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:choice minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:documentation>This optional element is a hash of the plane's image data. It is a choice between all the support hash types. Currently the only method supported is SHA1.</xsd:documentation>
        </xsd:annotation>
        <xsd:element name="HashSHA1" type="Hex40" minOccurs="1" maxOccurs="1"/>
      </xsd:choice>
      <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
    </xsd:sequence>
    <xsd:attribute name="TheZ" use="required" type="NonNegativeInt">
      <xsd:annotation>
        <xsd:documentation>The Z-section this plane is for. [units:none] This is numbered from 0.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="TheT" use="required" type="NonNegativeInt">
      <xsd:annotation>
        <xsd:documentation>The timepoint this plane is for. [units:none] This is numbered from 0.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="TheC" use="required" type="NonNegativeInt">
      <xsd:annotation>
        <xsd:documentation>The channel this plane is for. [units:none] This is numbered from 0.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="DeltaT" use="optional" type="xsd:float">
      <xsd:annotation>
        <xsd:documentation>Time since the beginning of the experiment. Units are set by DeltaTUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="DeltaTUnit" use="optional" default="s" type="UnitsTime">
      <xsd:annotation>
        <xsd:documentation>The units of the DeltaT - default:seconds[s].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="ExposureTime" use="optional" type="xsd:float">
      <xsd:annotation>
        <xsd:documentation>The length of the exposure. Units are set by ExposureTimeUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="ExposureTimeUnit" use="optional" default="s" type="UnitsTime">
      <xsd:annotation>
        <xsd:documentation>The units of the ExposureTime - default:seconds[s].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PositionX" use="optional" type="xsd:float">
      <xsd:annotation>
        <xsd:documentation>The X position of the stage. Units are set by PositionXUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PositionXUnit" use="optional" default="reference frame" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the X stage position - default:[reference frame].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PositionY" use="optional" type="xsd:float">
      <xsd:annotation>
        <xsd:documentation>The Y position of the stage. Units are set by PositionYUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PositionYUnit" use="optional" default="reference frame" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the Y stage position - default:[reference frame].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PositionZ" use="optional" type="xsd:float">
      <xsd:annotation>
        <xsd:documentation>The Z position of the stage. Units are set by PositionZUnit.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="PositionZUnit" use="optional" default="reference frame" type="UnitsLength">
      <xsd:annotation>
        <xsd:documentation>The units of the Z stage position - default:[reference frame].</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Plane / HashSHA1
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#Hex40
Type Hex40
Properties
content simple
minOccurs 1
maxOccurs 1
Facets
length 20
Source
<xsd:element name="HashSHA1" type="Hex40" minOccurs="1" maxOccurs="1"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element MicrobeamManipulationRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#MicrobeamManipulationRef_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Used by
Element Image
Attributes
QName Type Use
ID MicrobeamManipulationID required
Source
<xsd:element name="MicrobeamManipulationRef">
  <!-- top level definition -->
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="MicrobeamManipulationID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element StructuredAnnotations
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
An unordered collection of annotation attached to objects in the OME data model.
Diagram
Diagram ome_xsd.tmp#XMLAnnotation ome_xsd.tmp#FileAnnotation ome_xsd.tmp#ListAnnotation ome_xsd.tmp#LongAnnotation ome_xsd.tmp#DoubleAnnotation ome_xsd.tmp#CommentAnnotation ome_xsd.tmp#BooleanAnnotation ome_xsd.tmp#TimestampAnnotation ome_xsd.tmp#TagAnnotation ome_xsd.tmp#TermAnnotation ome_xsd.tmp#MapAnnotation
Properties
content complex
Used by
Element OME
Model
Children BooleanAnnotation, CommentAnnotation, DoubleAnnotation, FileAnnotation, ListAnnotation, LongAnnotation, MapAnnotation, TagAnnotation, TermAnnotation, TimestampAnnotation, XMLAnnotation
Instance
<StructuredAnnotations xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <XMLAnnotation Annotator="" ID="" Namespace="">{1,1}</XMLAnnotation>
  <FileAnnotation Annotator="" ID="" Namespace="">{1,1}</FileAnnotation>
  <ListAnnotation Annotator="" ID="" Namespace="">{1,1}</ListAnnotation>
  <LongAnnotation Annotator="" ID="" Namespace="">{1,1}</LongAnnotation>
  <DoubleAnnotation Annotator="" ID="" Namespace="">{1,1}</DoubleAnnotation>
  <CommentAnnotation Annotator="" ID="" Namespace="">{1,1}</CommentAnnotation>
  <BooleanAnnotation Annotator="" ID="" Namespace="">{1,1}</BooleanAnnotation>
  <TimestampAnnotation Annotator="" ID="" Namespace="">{1,1}</TimestampAnnotation>
  <TagAnnotation Annotator="" ID="" Namespace="">{1,1}</TagAnnotation>
  <TermAnnotation Annotator="" ID="" Namespace="">{1,1}</TermAnnotation>
  <MapAnnotation Annotator="" ID="" Namespace="">{1,1}</MapAnnotation>
</StructuredAnnotations>
Source
<xsd:element name="StructuredAnnotations">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:documentation>An unordered collection of annotation attached to objects in the OME data model.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:choice minOccurs="0" maxOccurs="unbounded">
      <xsd:element ref="XMLAnnotation" minOccurs="1" maxOccurs="1"/>
      <xsd:element ref="FileAnnotation" minOccurs="1" maxOccurs="1"/>
      <xsd:element ref="ListAnnotation" minOccurs="1" maxOccurs="1"/>
      <xsd:element ref="LongAnnotation" minOccurs="1" maxOccurs="1"/>
      <xsd:element ref="DoubleAnnotation" minOccurs="1" maxOccurs="1"/>
      <xsd:element ref="CommentAnnotation" minOccurs="1" maxOccurs="1"/>
      <xsd:element ref="BooleanAnnotation" minOccurs="1" maxOccurs="1"/>
      <xsd:element ref="TimestampAnnotation" minOccurs="1" maxOccurs="1"/>
      <xsd:element ref="TagAnnotation" minOccurs="1" maxOccurs="1"/>
      <xsd:element ref="TermAnnotation" minOccurs="1" maxOccurs="1"/>
      <xsd:element ref="MapAnnotation" minOccurs="1" maxOccurs="1"/>
    </xsd:choice>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element XMLAnnotation
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
An general xml annotation. The contents of this is not processed as OME XML but should still be well-formed XML.
Diagram
Diagram ome_xsd.tmp#Annotation_ID ome_xsd.tmp#Annotation_Namespace ome_xsd.tmp#Annotation_Annotator ome_xsd.tmp#Annotation_Description ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Annotation ome_xsd.tmp#TextAnnotation ome_xsd.tmp#XMLAnnotation_Value
Type extension of TextAnnotation
Type hierarchy
Properties
content complex
Used by
Model
Children AnnotationRef, Description, Value
Instance
<XMLAnnotation Annotator="" ID="" Namespace="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
  <Value>{1,1}</Value>
</XMLAnnotation>
Attributes
QName Type Use Annotation
Annotator ExperimenterID optional
The Annotator is the person who attached this annotation.
e.g. If UserA annotates something with TagB, owned by UserB,
UserA is still the Annotator.
ID AnnotationID required
Namespace xsd:anyURI optional
We recommend the inclusion of a namespace for annotations you
define. If it is absent then we assume the annotation is to
use our (OME's) default interpretation for this type.
Source
<xsd:element name="XMLAnnotation">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>XMLAnnotations</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>An general xml annotation. The contents of this is not processed as OME XML but should still be well-formed XML.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="TextAnnotation">
        <xsd:sequence>
          <xsd:element name="Value" minOccurs="1" maxOccurs="1">
            <xsd:complexType>
              <xsd:sequence>
                <xsd:any processContents="lax" minOccurs="0" maxOccurs="unbounded"/>
              </xsd:sequence>
            </xsd:complexType>
          </xsd:element>
        </xsd:sequence>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Annotation / Description
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A description for the annotation. [plain-text multi-line string]
Diagram
Diagram
Type restriction of xsd:string
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
whiteSpace preserve
Source
<xsd:element name="Description" minOccurs="0" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>A description for the annotation. [plain-text multi-line string]</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:whiteSpace value="preserve"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element XMLAnnotation / Value
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram
Properties
content complex
minOccurs 1
maxOccurs 1
Model
ANY element from ANY namespace
Source
<xsd:element name="Value" minOccurs="1" maxOccurs="1">
  <xsd:complexType>
    <xsd:sequence>
      <xsd:any processContents="lax" minOccurs="0" maxOccurs="unbounded"/>
    </xsd:sequence>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element FileAnnotation
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A file object annotation
Diagram
Diagram ome_xsd.tmp#Annotation_ID ome_xsd.tmp#Annotation_Namespace ome_xsd.tmp#Annotation_Annotator ome_xsd.tmp#Annotation_Description ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Annotation ome_xsd.tmp#TypeAnnotation ome_xsd.tmp#BinaryFile
Type extension of TypeAnnotation
Type hierarchy
Properties
content complex
Used by
Model
Children AnnotationRef, BinaryFile, Description
Instance
<FileAnnotation Annotator="" ID="" Namespace="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
  <BinaryFile FileName="" MIMEType="" Size="">{1,1}</BinaryFile>
</FileAnnotation>
Attributes
QName Type Use Annotation
Annotator ExperimenterID optional
The Annotator is the person who attached this annotation.
e.g. If UserA annotates something with TagB, owned by UserB,
UserA is still the Annotator.
ID AnnotationID required
Namespace xsd:anyURI optional
We recommend the inclusion of a namespace for annotations you
define. If it is absent then we assume the annotation is to
use our (OME's) default interpretation for this type.
Source
<xsd:element name="FileAnnotation">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>FileAnnotations</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>A file object annotation</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="TypeAnnotation">
        <xsd:sequence>
          <xsd:element ref="BinaryFile" minOccurs="1" maxOccurs="1"/>
        </xsd:sequence>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element BinaryFile
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
Describes a binary file.
Diagram
Diagram ome_xsd.tmp#BinaryFile_FileName ome_xsd.tmp#BinaryFile_Size ome_xsd.tmp#BinaryFile_MIMEType ome_xsd.tmp#External ome_xsd.tmp#BinData
Properties
content complex
Used by
Element FileAnnotation
Model
Children BinData, External
Instance
<BinaryFile FileName="" MIMEType="" Size="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <External Compression="none" href="" SHA1="">{1,1}</External>
  <BinData BigEndian="" Compression="none" Length="">{1,1}</BinData>
</BinaryFile>
Attributes
QName Type Use Annotation
FileName xsd:string required
MIMEType xsd:string optional
Size NonNegativeLong required
Size of the uncompressed file. [unit:bytes]
Source
<xsd:element name="BinaryFile">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>BinaryFiles</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>Describes a binary file.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:choice minOccurs="1" maxOccurs="1">
      <xsd:element ref="External" minOccurs="1" maxOccurs="1"/>
      <xsd:element ref="BinData" minOccurs="1" maxOccurs="1"/>
    </xsd:choice>
    <xsd:attribute name="FileName" use="required" type="xsd:string"/>
    <xsd:attribute name="Size" use="required" type="NonNegativeLong">
      <xsd:annotation>
        <xsd:documentation>Size of the uncompressed file. [unit:bytes]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="MIMEType" use="optional" type="xsd:string"/>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element External
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
Describes a file location.  Can optionally specify a portion of a file using Offset and a ReadLength.
If Offset and ReadLength are specified in conjuction with Compression, then they point into the uncompressed file.
Diagram
Diagram ome_xsd.tmp#External_href ome_xsd.tmp#External_SHA1 ome_xsd.tmp#External_Compression
Properties
content complex
Used by
Element BinaryFile
Attributes
QName Type Default Use Annotation
Compression restriction of xsd:string none optional
Specifies the compression scheme used to encode the data.
SHA1 Hex40 required
The digest of the file specified in href.
href xsd:anyURI required
file location
Source
<xsd:element name="External">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Externals</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>Describes a file location. Can optionally specify a portion of a file using Offset and a ReadLength. If Offset and ReadLength are specified in conjuction with Compression, then they point into the uncompressed file.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:attribute name="href" use="required" type="xsd:anyURI">
      <xsd:annotation>
        <xsd:documentation>file location</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="SHA1" use="required" type="Hex40">
      <xsd:annotation>
        <xsd:documentation>The digest of the file specified in href.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="Compression" default="none" use="optional">
      <xsd:annotation>
        <xsd:documentation>Specifies the compression scheme used to encode the data.</xsd:documentation>
      </xsd:annotation>
      <xsd:simpleType>
        <xsd:restriction base="xsd:string">
          <xsd:enumeration value="zlib"/>
          <xsd:enumeration value="bzip2"/>
          <xsd:enumeration value="none"/>
        </xsd:restriction>
      </xsd:simpleType>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ListAnnotation
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This annotation is a grouping object. It uses the sequence of
annotation refs from the base Annotation to form the list.
Diagram
Diagram ome_xsd.tmp#Annotation_ID ome_xsd.tmp#Annotation_Namespace ome_xsd.tmp#Annotation_Annotator ome_xsd.tmp#Annotation_Description ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Annotation
Type extension of Annotation
Type hierarchy
Properties
content complex
Used by
Model
Children AnnotationRef, Description
Instance
<ListAnnotation Annotator="" ID="" Namespace="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</ListAnnotation>
Attributes
QName Type Use Annotation
Annotator ExperimenterID optional
The Annotator is the person who attached this annotation.
e.g. If UserA annotates something with TagB, owned by UserB,
UserA is still the Annotator.
ID AnnotationID required
Namespace xsd:anyURI optional
We recommend the inclusion of a namespace for annotations you
define. If it is absent then we assume the annotation is to
use our (OME's) default interpretation for this type.
Source
<xsd:element name="ListAnnotation">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>ListAnnotations</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>This annotation is a grouping object. It uses the sequence of annotation refs from the base Annotation to form the list.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Annotation"/>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element LongAnnotation
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A simple numerical annotation of type xsd:long
Diagram
Diagram ome_xsd.tmp#Annotation_ID ome_xsd.tmp#Annotation_Namespace ome_xsd.tmp#Annotation_Annotator ome_xsd.tmp#Annotation_Description ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Annotation ome_xsd.tmp#BasicAnnotation ome_xsd.tmp#NumericAnnotation ome_xsd.tmp#LongAnnotation_Value
Type extension of NumericAnnotation
Type hierarchy
Properties
content complex
Used by
Model
Children AnnotationRef, Description, Value
Instance
<LongAnnotation Annotator="" ID="" Namespace="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
  <Value>{1,1}</Value>
</LongAnnotation>
Attributes
QName Type Use Annotation
Annotator ExperimenterID optional
The Annotator is the person who attached this annotation.
e.g. If UserA annotates something with TagB, owned by UserB,
UserA is still the Annotator.
ID AnnotationID required
Namespace xsd:anyURI optional
We recommend the inclusion of a namespace for annotations you
define. If it is absent then we assume the annotation is to
use our (OME's) default interpretation for this type.
Source
<xsd:element name="LongAnnotation">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>LongAnnotations</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>A simple numerical annotation of type xsd:long</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="NumericAnnotation">
        <xsd:sequence>
          <xsd:element name="Value" type="xsd:long" minOccurs="1" maxOccurs="1"/>
        </xsd:sequence>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element LongAnnotation / Value
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram
Type xsd:long
Properties
content simple
minOccurs 1
maxOccurs 1
Source
<xsd:element name="Value" type="xsd:long" minOccurs="1" maxOccurs="1"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element DoubleAnnotation
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A simple numerical annotation of type xsd:double
Diagram
Diagram ome_xsd.tmp#Annotation_ID ome_xsd.tmp#Annotation_Namespace ome_xsd.tmp#Annotation_Annotator ome_xsd.tmp#Annotation_Description ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Annotation ome_xsd.tmp#BasicAnnotation ome_xsd.tmp#NumericAnnotation ome_xsd.tmp#DoubleAnnotation_Value
Type extension of NumericAnnotation
Type hierarchy
Properties
content complex
Used by
Model
Children AnnotationRef, Description, Value
Instance
<DoubleAnnotation Annotator="" ID="" Namespace="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
  <Value>{1,1}</Value>
</DoubleAnnotation>
Attributes
QName Type Use Annotation
Annotator ExperimenterID optional
The Annotator is the person who attached this annotation.
e.g. If UserA annotates something with TagB, owned by UserB,
UserA is still the Annotator.
ID AnnotationID required
Namespace xsd:anyURI optional
We recommend the inclusion of a namespace for annotations you
define. If it is absent then we assume the annotation is to
use our (OME's) default interpretation for this type.
Source
<xsd:element name="DoubleAnnotation">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>DoubleAnnotations</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>A simple numerical annotation of type xsd:double</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="NumericAnnotation">
        <xsd:sequence>
          <xsd:element name="Value" type="xsd:double" minOccurs="1" maxOccurs="1"/>
        </xsd:sequence>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element DoubleAnnotation / Value
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram
Type xsd:double
Properties
content simple
minOccurs 1
maxOccurs 1
Source
<xsd:element name="Value" type="xsd:double" minOccurs="1" maxOccurs="1"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element CommentAnnotation
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A simple comment annotation
Diagram
Diagram ome_xsd.tmp#Annotation_ID ome_xsd.tmp#Annotation_Namespace ome_xsd.tmp#Annotation_Annotator ome_xsd.tmp#Annotation_Description ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Annotation ome_xsd.tmp#TextAnnotation ome_xsd.tmp#CommentAnnotation_Value
Type extension of TextAnnotation
Type hierarchy
Properties
content complex
Used by
Model
Children AnnotationRef, Description, Value
Instance
<CommentAnnotation Annotator="" ID="" Namespace="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
  <Value>{1,1}</Value>
</CommentAnnotation>
Attributes
QName Type Use Annotation
Annotator ExperimenterID optional
The Annotator is the person who attached this annotation.
e.g. If UserA annotates something with TagB, owned by UserB,
UserA is still the Annotator.
ID AnnotationID required
Namespace xsd:anyURI optional
We recommend the inclusion of a namespace for annotations you
define. If it is absent then we assume the annotation is to
use our (OME's) default interpretation for this type.
Source
<xsd:element name="CommentAnnotation">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>CommentAnnotations</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>A simple comment annotation</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="TextAnnotation">
        <xsd:sequence>
          <xsd:element name="Value" type="xsd:string" minOccurs="1" maxOccurs="1"/>
        </xsd:sequence>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element CommentAnnotation / Value
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram
Type xsd:string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
<xsd:element name="Value" type="xsd:string" minOccurs="1" maxOccurs="1"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element BooleanAnnotation
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A simple boolean annotation of type xsd:boolean
Diagram
Diagram ome_xsd.tmp#Annotation_ID ome_xsd.tmp#Annotation_Namespace ome_xsd.tmp#Annotation_Annotator ome_xsd.tmp#Annotation_Description ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Annotation ome_xsd.tmp#BasicAnnotation ome_xsd.tmp#BooleanAnnotation_Value
Type extension of BasicAnnotation
Type hierarchy
Properties
content complex
Used by
Model
Children AnnotationRef, Description, Value
Instance
<BooleanAnnotation Annotator="" ID="" Namespace="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
  <Value>{1,1}</Value>
</BooleanAnnotation>
Attributes
QName Type Use Annotation
Annotator ExperimenterID optional
The Annotator is the person who attached this annotation.
e.g. If UserA annotates something with TagB, owned by UserB,
UserA is still the Annotator.
ID AnnotationID required
Namespace xsd:anyURI optional
We recommend the inclusion of a namespace for annotations you
define. If it is absent then we assume the annotation is to
use our (OME's) default interpretation for this type.
Source
<xsd:element name="BooleanAnnotation">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>BooleanAnnotations</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>A simple boolean annotation of type xsd:boolean</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="BasicAnnotation">
        <xsd:sequence>
          <xsd:element name="Value" type="xsd:boolean" minOccurs="1" maxOccurs="1"/>
        </xsd:sequence>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element BooleanAnnotation / Value
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram
Type xsd:boolean
Properties
content simple
minOccurs 1
maxOccurs 1
Source
<xsd:element name="Value" type="xsd:boolean" minOccurs="1" maxOccurs="1"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element TimestampAnnotation
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A date/time annotation of type xsd:dateTime
Diagram
Diagram ome_xsd.tmp#Annotation_ID ome_xsd.tmp#Annotation_Namespace ome_xsd.tmp#Annotation_Annotator ome_xsd.tmp#Annotation_Description ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Annotation ome_xsd.tmp#BasicAnnotation ome_xsd.tmp#TimestampAnnotation_Value
Type extension of BasicAnnotation
Type hierarchy
Properties
content complex
Used by
Model
Children AnnotationRef, Description, Value
Instance
<TimestampAnnotation Annotator="" ID="" Namespace="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
  <Value>{1,1}</Value>
</TimestampAnnotation>
Attributes
QName Type Use Annotation
Annotator ExperimenterID optional
The Annotator is the person who attached this annotation.
e.g. If UserA annotates something with TagB, owned by UserB,
UserA is still the Annotator.
ID AnnotationID required
Namespace xsd:anyURI optional
We recommend the inclusion of a namespace for annotations you
define. If it is absent then we assume the annotation is to
use our (OME's) default interpretation for this type.
Source
<xsd:element name="TimestampAnnotation">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>TimestampAnnotations</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>A date/time annotation of type xsd:dateTime</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="BasicAnnotation">
        <xsd:sequence>
          <xsd:element name="Value" type="xsd:dateTime" minOccurs="1" maxOccurs="1"/>
        </xsd:sequence>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element TimestampAnnotation / Value
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram
Type xsd:dateTime
Properties
content simple
minOccurs 1
maxOccurs 1
Source
<xsd:element name="Value" type="xsd:dateTime" minOccurs="1" maxOccurs="1"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element TagAnnotation
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A tag annotation (represents a tag or a tagset)
Diagram
Diagram ome_xsd.tmp#Annotation_ID ome_xsd.tmp#Annotation_Namespace ome_xsd.tmp#Annotation_Annotator ome_xsd.tmp#Annotation_Description ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Annotation ome_xsd.tmp#TextAnnotation ome_xsd.tmp#TagAnnotation_Value
Type extension of TextAnnotation
Type hierarchy
Properties
content complex
Used by
Model
Children AnnotationRef, Description, Value
Instance
<TagAnnotation Annotator="" ID="" Namespace="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
  <Value>{1,1}</Value>
</TagAnnotation>
Attributes
QName Type Use Annotation
Annotator ExperimenterID optional
The Annotator is the person who attached this annotation.
e.g. If UserA annotates something with TagB, owned by UserB,
UserA is still the Annotator.
ID AnnotationID required
Namespace xsd:anyURI optional
We recommend the inclusion of a namespace for annotations you
define. If it is absent then we assume the annotation is to
use our (OME's) default interpretation for this type.
Source
<xsd:element name="TagAnnotation">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>TagAnnotations</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>A tag annotation (represents a tag or a tagset)</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="TextAnnotation">
        <xsd:sequence>
          <xsd:element name="Value" type="xsd:string" minOccurs="1" maxOccurs="1"/>
        </xsd:sequence>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element TagAnnotation / Value
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram
Type xsd:string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
<xsd:element name="Value" type="xsd:string" minOccurs="1" maxOccurs="1"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element TermAnnotation
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A ontology term annotation
Diagram
Diagram ome_xsd.tmp#Annotation_ID ome_xsd.tmp#Annotation_Namespace ome_xsd.tmp#Annotation_Annotator ome_xsd.tmp#Annotation_Description ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Annotation ome_xsd.tmp#BasicAnnotation ome_xsd.tmp#TermAnnotation_Value
Type extension of BasicAnnotation
Type hierarchy
Properties
content complex
Used by
Model
Children AnnotationRef, Description, Value
Instance
<TermAnnotation Annotator="" ID="" Namespace="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
  <Value>{1,1}</Value>
</TermAnnotation>
Attributes
QName Type Use Annotation
Annotator ExperimenterID optional
The Annotator is the person who attached this annotation.
e.g. If UserA annotates something with TagB, owned by UserB,
UserA is still the Annotator.
ID AnnotationID required
Namespace xsd:anyURI optional
We recommend the inclusion of a namespace for annotations you
define. If it is absent then we assume the annotation is to
use our (OME's) default interpretation for this type.
Source
<xsd:element name="TermAnnotation">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>TermAnnotations</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>A ontology term annotation</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="BasicAnnotation">
        <xsd:sequence>
          <xsd:element name="Value" type="xsd:string" minOccurs="1" maxOccurs="1"/>
        </xsd:sequence>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element TermAnnotation / Value
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram
Type xsd:string
Properties
content simple
minOccurs 1
maxOccurs 1
Source
<xsd:element name="Value" type="xsd:string" minOccurs="1" maxOccurs="1"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element MapAnnotation
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
An map annotation. The contents of this is a list of key/value pairs.
Diagram
Diagram ome_xsd.tmp#Annotation_ID ome_xsd.tmp#Annotation_Namespace ome_xsd.tmp#Annotation_Annotator ome_xsd.tmp#Annotation_Description ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Annotation ome_xsd.tmp#MapAnnotation_Value
Type extension of Annotation
Type hierarchy
Properties
content complex
Used by
Model
Children AnnotationRef, Description, Value
Instance
<MapAnnotation Annotator="" ID="" Namespace="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Description>{0,1}</Description>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
  <Value>{1,1}</Value>
</MapAnnotation>
Attributes
QName Type Use Annotation
Annotator ExperimenterID optional
The Annotator is the person who attached this annotation.
e.g. If UserA annotates something with TagB, owned by UserB,
UserA is still the Annotator.
ID AnnotationID required
Namespace xsd:anyURI optional
We recommend the inclusion of a namespace for annotations you
define. If it is absent then we assume the annotation is to
use our (OME's) default interpretation for this type.
Source
<xsd:element name="MapAnnotation">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>MapAnnotations</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>An map annotation. The contents of this is a list of key/value pairs.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Annotation">
        <xsd:sequence>
          <xsd:element name="Value" type="Map" minOccurs="1" maxOccurs="1"/>
        </xsd:sequence>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element MapAnnotation / Value
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#Map_M ome_xsd.tmp#Map
Type Map
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children M
Instance
<Value xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <M K="">{0,unbounded}</M>
</Value>
Source
<xsd:element name="Value" type="Map" minOccurs="1" maxOccurs="1"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ROI
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A four dimensional 'Region of Interest'.
If they are not used, and the Image has more than one plane,
the entire set of planes is assumed to be included in the ROI.
Multiple ROIs may be specified.
Diagram
Diagram ome_xsd.tmp#ROI_ID ome_xsd.tmp#ROI_Name ome_xsd.tmp#ROI_Union ome_xsd.tmp#AnnotationRef ome_xsd.tmp#ROI_Description
Properties
content complex
Used by
Element OME
Model
Children AnnotationRef, Description, Union
Instance
<ROI ID="" Name="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Union>{1,1}</Union>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
  <Description>{0,1}</Description>
</ROI>
Attributes
QName Type Use Annotation
ID ROIID required
Name xsd:string optional
The Name identifies the ROI to the user. [plain-text string]
Source
<xsd:element name="ROI">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>ROIs</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>A four dimensional 'Region of Interest'. If they are not used, and the Image has more than one plane, the entire set of planes is assumed to be included in the ROI. Multiple ROIs may be specified.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:sequence>
      <xsd:choice minOccurs="1" maxOccurs="1">
        <xsd:element name="Union" minOccurs="1" maxOccurs="1">
          <xsd:complexType>
            <xsd:sequence>
              <xsd:element ref="ShapeGroup" minOccurs="1" maxOccurs="unbounded"/>
            </xsd:sequence>
          </xsd:complexType>
        </xsd:element>
      </xsd:choice>
      <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
      <xsd:element name="Description" minOccurs="0" maxOccurs="1">
        <xsd:annotation>
          <xsd:documentation>A description for the ROI. [plain-text multi-line string]</xsd:documentation>
        </xsd:annotation>
        <xsd:simpleType>
          <xsd:restriction base="xsd:string">
            <xsd:whiteSpace value="preserve"/>
          </xsd:restriction>
        </xsd:simpleType>
      </xsd:element>
    </xsd:sequence>
    <xsd:attribute name="ID" use="required" type="ROIID"/>
    <xsd:attribute name="Name" use="optional" type="xsd:string">
      <xsd:annotation>
        <xsd:documentation>The Name identifies the ROI to the user. [plain-text string]</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ROI / Union
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#ShapeGroup
Properties
content complex
minOccurs 1
maxOccurs 1
Model
Children ShapeGroup
Instance
<Union xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <ShapeGroup FillColor="" FillRule="" FontFamily="" FontSize="" FontSizeUnit="pt" FontStyle="" ID="" Locked="" StrokeColor="" StrokeDashArray="" StrokeWidth="" StrokeWidthUnit="pixel" Text="" TheC="" TheT="" TheZ="">{1,unbounded}</ShapeGroup>
</Union>
Source
<xsd:element name="Union" minOccurs="1" maxOccurs="1">
  <xsd:complexType>
    <xsd:sequence>
      <xsd:element ref="ShapeGroup" minOccurs="1" maxOccurs="unbounded"/>
    </xsd:sequence>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ShapeGroup
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#Shape_FillColor ome_xsd.tmp#Shape_FillRule ome_xsd.tmp#Shape_StrokeColor ome_xsd.tmp#Shape_StrokeWidth ome_xsd.tmp#Shape_StrokeWidthUnit ome_xsd.tmp#Shape_StrokeDashArray ome_xsd.tmp#Shape_Text ome_xsd.tmp#Shape_FontFamily ome_xsd.tmp#Shape_FontSize ome_xsd.tmp#Shape_FontSizeUnit ome_xsd.tmp#Shape_FontStyle ome_xsd.tmp#Shape_Locked ome_xsd.tmp#Shape_ID ome_xsd.tmp#Shape_TheZ ome_xsd.tmp#Shape_TheT ome_xsd.tmp#Shape_TheC ome_xsd.tmp#Shape_Transform ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Shape ome_xsd.tmp#Ellipse ome_xsd.tmp#Label ome_xsd.tmp#Line ome_xsd.tmp#Mask ome_xsd.tmp#Point ome_xsd.tmp#Polygon ome_xsd.tmp#Polyline ome_xsd.tmp#Rectangle
Type Shape
Properties
content complex
abstract true
Substitution Group
Used by
Element ROI/Union
Model
Children AnnotationRef, Transform
Instance
<ShapeGroup FillColor="" FillRule="" FontFamily="" FontSize="" FontSizeUnit="pt" FontStyle="" ID="" Locked="" StrokeColor="" StrokeDashArray="" StrokeWidth="" StrokeWidthUnit="pixel" Text="" TheC="" TheT="" TheZ="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Transform A00="" A01="" A02="" A10="" A11="" A12="">{0,1}</Transform>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</ShapeGroup>
Attributes
QName Type Default Use Annotation
FillColor Color optional
The color of the fill - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
FillRule restriction of xsd:string optional
FontFamily restriction of xsd:string optional
FontSize NonNegativeInt optional
Size of the font. Units are set by FontSizeUnit.
FontSizeUnit UnitsLength pt optional
The units used for the font size.
FontStyle restriction of xsd:string optional
ID ShapeID required
Locked xsd:boolean optional
Controls whether the shape is locked and read only,
true is locked, false is editable.
StrokeColor Color optional
The color of the stroke  - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
StrokeDashArray xsd:string optional
e.g. "none", "10 20 30 10"
StrokeWidth xsd:float optional
The width of the stroke. Units are set by StrokeWidthUnit.
StrokeWidthUnit UnitsLength pixel optional
The units used for the stroke width.
Text xsd:string optional
TheC NonNegativeInt optional
The channel the ROI applies to. If not specified then
the ROI applies to all the channels of the image. [units:none]
This is numbered from 0.
TheT NonNegativeInt optional
The timepoint the ROI applies to. If not specified then
the ROI applies to all the timepoints of the image. [units:none]
This is numbered from 0.
TheZ NonNegativeInt optional
The z-section the ROI applies to. If not specified then
the ROI applies to all the z-sections of the image. [units:none]
This is numbered from 0.
Source
<xsd:element name="ShapeGroup" abstract="true" type="Shape"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Shape / Transform
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This is a matrix used to transform the shape.
The element has 6 xsd:float attributes. If the element
is present then all 6 values must be included.
Diagram
Diagram ome_xsd.tmp#AffineTransform_A00 ome_xsd.tmp#AffineTransform_A10 ome_xsd.tmp#AffineTransform_A01 ome_xsd.tmp#AffineTransform_A11 ome_xsd.tmp#AffineTransform_A02 ome_xsd.tmp#AffineTransform_A12 ome_xsd.tmp#AffineTransform
Type AffineTransform
Properties
content complex
minOccurs 0
maxOccurs 1
Attributes
QName Type Use
A00 xsd:float required
A01 xsd:float required
A02 xsd:float required
A10 xsd:float required
A11 xsd:float required
A12 xsd:float required
Source
<xsd:element name="Transform" type="AffineTransform" minOccurs="0" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>This is a matrix used to transform the shape. The element has 6 xsd:float attributes. If the element is present then all 6 values must be included.</xsd:documentation>
  </xsd:annotation>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ROI / Description
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A description for the ROI. [plain-text multi-line string]
Diagram
Diagram
Type restriction of xsd:string
Properties
content simple
minOccurs 0
maxOccurs 1
Facets
whiteSpace preserve
Source
<xsd:element name="Description" minOccurs="0" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>A description for the ROI. [plain-text multi-line string]</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:whiteSpace value="preserve"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element OME / BinaryOnly
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
Pointer to an external metadata file. If this
element is present, then no other metadata may be present in this
file, i.e. this file is a place-holder.
Diagram
Diagram ome_xsd.tmp#OME_OME_BinaryOnly_MetadataFile ome_xsd.tmp#OME_OME_BinaryOnly_UUID
Properties
content complex
minOccurs 1
maxOccurs 1
Attributes
QName Type Use Annotation
MetadataFile xsd:string required
Filename of the OME-XML metadata file for
this binary data. If the file cannot be found, a search can
be performed based on the UUID.
UUID UniversallyUniqueIdentifier required
The unique identifier of another OME-XML
block whose metadata describes the binary data in this file.
This UUID is considered authoritative regardless of
mismatches in the filename.
Source
<xsd:element name="BinaryOnly" minOccurs="1" maxOccurs="1">
  <xsd:annotation>
    <xsd:documentation>Pointer to an external metadata file. If this element is present, then no other metadata may be present in this file, i.e. this file is a place-holder.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:attribute name="MetadataFile" type="xsd:string" use="required">
      <xsd:annotation>
        <xsd:documentation>Filename of the OME-XML metadata file for this binary data. If the file cannot be found, a search can be performed based on the UUID.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
    <xsd:attribute name="UUID" type="UniversallyUniqueIdentifier" use="required">
      <xsd:annotation>
        <xsd:documentation>The unique identifier of another OME-XML block whose metadata describes the binary data in this file. This UUID is considered authoritative regardless of mismatches in the filename.</xsd:documentation>
      </xsd:annotation>
    </xsd:attribute>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Laser
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
Laser types are specified using two attributes - the Type and the LaserMedium.
Diagram
Diagram ome_xsd.tmp#ManufacturerSpec_Manufacturer ome_xsd.tmp#ManufacturerSpec_Model ome_xsd.tmp#ManufacturerSpec_SerialNumber ome_xsd.tmp#ManufacturerSpec_LotNumber ome_xsd.tmp#ManufacturerSpec ome_xsd.tmp#LightSource_ID ome_xsd.tmp#LightSource_Power ome_xsd.tmp#LightSource_PowerUnit ome_xsd.tmp#AnnotationRef ome_xsd.tmp#LightSource ome_xsd.tmp#Laser_Type ome_xsd.tmp#Laser_LaserMedium ome_xsd.tmp#Laser_Wavelength ome_xsd.tmp#Laser_WavelengthUnit ome_xsd.tmp#Laser_FrequencyMultiplication ome_xsd.tmp#Laser_Tuneable ome_xsd.tmp#Laser_Pulse ome_xsd.tmp#Laser_PockelCell ome_xsd.tmp#Laser_RepetitionRate ome_xsd.tmp#Laser_RepetitionRateUnit ome_xsd.tmp#Pump ome_xsd.tmp#LightSourceGroup
Type extension of LightSource
Type hierarchy
Properties
content complex
Substitution Group Affiliation
Model
Children AnnotationRef, Pump
Instance
<Laser FrequencyMultiplication="" ID="" LaserMedium="" LotNumber="" Manufacturer="" Model="" PockelCell="" Power="" PowerUnit="mW" Pulse="" RepetitionRate="" RepetitionRateUnit="Hz" SerialNumber="" Tuneable="" Type="" Wavelength="" WavelengthUnit="nm" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
  <Pump ID="">{0,1}</Pump>
</Laser>
Attributes
QName Type Default Use Annotation
FrequencyMultiplication PositiveInt optional
FrequencyMultiplication that may be specified. [units:none]
ID LightSourceID required
A LightSource ID must be specified for each light source, and the individual
light sources can be referred to by their LightSource IDs (eg from Channel).
LaserMedium restriction of xsd:string optional
The Medium attribute specifies the actual lasing medium
for a given laser type.
LotNumber xsd:string optional
The lot number of the component. [plain text string]
Manufacturer xsd:string optional
The manufacturer of the component. [plain text string]
Model xsd:string optional
The Model of the component. [plain text string]
PockelCell xsd:boolean optional
If true the laser has a PockelCell to rotate the polarization of the beam. [flag]
Power xsd:float optional
The light-source power. Units are set by PowerUnit.
PowerUnit UnitsPower mW optional
The units of the Power - default:milliwatts[mW].
Pulse restriction of xsd:string optional
The Pulse mode of the laser.
RepetitionRate xsd:float optional
The is the rate in Hz at which the laser pulses if
the Pulse type is 'Repetitive'. hertz[Hz]
Units are set by RepetitionRateUnit.
RepetitionRateUnit UnitsFrequency Hz optional
The units of the RepetitionRate - default:hertz[Hz].
SerialNumber xsd:string optional
The serial number of the component. [plain text string]
Tuneable xsd:boolean optional
Whether or not the laser is Tuneable [flag]
Type restriction of xsd:string optional
Type is the general category of laser.
Wavelength PositiveFloat optional
The Wavelength of the laser. Units are set by WavelengthUnit.
WavelengthUnit UnitsLength nm optional
The units of the Wavelength - default:nanometres[nm].
Source
<xsd:element name="Laser" substitutionGroup="LightSourceGroup">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Lasers</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>Laser types are specified using two attributes - the Type and the LaserMedium.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="LightSource">
        <xsd:sequence>
          <xsd:element ref="Pump" minOccurs="0" maxOccurs="1">
            <xsd:annotation>
              <xsd:documentation>The Laser element may contain a Pump sub-element which refers to a LightSource used as a laser pump.</xsd:documentation>
            </xsd:annotation>
          </xsd:element>
        </xsd:sequence>
        <xsd:attribute name="Type" use="optional">
          <xsd:annotation>
            <xsd:documentation>Type is the general category of laser.</xsd:documentation>
          </xsd:annotation>
          <xsd:simpleType>
            <xsd:restriction base="xsd:string">
              <xsd:enumeration value="Excimer"/>
              <xsd:enumeration value="Gas"/>
              <xsd:enumeration value="MetalVapor"/>
              <xsd:enumeration value="SolidState"/>
              <xsd:enumeration value="Dye"/>
              <xsd:enumeration value="Semiconductor"/>
              <xsd:enumeration value="FreeElectron"/>
              <xsd:enumeration value="Other"/>
            </xsd:restriction>
          </xsd:simpleType>
        </xsd:attribute>
        <xsd:attribute name="LaserMedium" use="optional">
          <xsd:annotation>
            <xsd:documentation>The Medium attribute specifies the actual lasing medium for a given laser type.</xsd:documentation>
          </xsd:annotation>
          <xsd:simpleType>
            <xsd:restriction base="xsd:string">
              <!-- MetalVaporLaserMedia -->
              <xsd:enumeration value="Cu"/>
              <xsd:enumeration value="Ag"/>
              <!-- ExcimerLaserMedia -->
              <xsd:enumeration value="ArFl"/>
              <xsd:enumeration value="ArCl"/>
              <xsd:enumeration value="KrFl"/>
              <xsd:enumeration value="KrCl"/>
              <xsd:enumeration value="XeFl"/>
              <xsd:enumeration value="XeCl"/>
              <xsd:enumeration value="XeBr"/>
              <!-- GasLaserMedia -->
              <xsd:enumeration value="N"/>
              <xsd:enumeration value="Ar"/>
              <xsd:enumeration value="Kr"/>
              <xsd:enumeration value="Xe"/>
              <xsd:enumeration value="HeNe"/>
              <xsd:enumeration value="HeCd"/>
              <xsd:enumeration value="CO"/>
              <xsd:enumeration value="CO2"/>
              <xsd:enumeration value="H2O"/>
              <xsd:enumeration value="HFl"/>
              <!-- SolidStateLaserMedia -->
              <xsd:enumeration value="NdGlass"/>
              <xsd:enumeration value="NdYAG"/>
              <xsd:enumeration value="ErGlass"/>
              <xsd:enumeration value="ErYAG"/>
              <xsd:enumeration value="HoYLF"/>
              <xsd:enumeration value="HoYAG"/>
              <xsd:enumeration value="Ruby"/>
              <xsd:enumeration value="TiSapphire"/>
              <xsd:enumeration value="Alexandrite"/>
              <!-- DyeLaserMedia -->
              <xsd:enumeration value="Rhodamine6G"/>
              <xsd:enumeration value="CoumarinC30"/>
              <!-- SemiconductorLaserMedia -->
              <xsd:enumeration value="GaAs"/>
              <xsd:enumeration value="GaAlAs"/>
              <!-- FreeElectronLaserMedia -->
              <xsd:enumeration value="EMinus"/>
              <!-- OtherLaserMedia -->
              <xsd:enumeration value="Other"/>
            </xsd:restriction>
          </xsd:simpleType>
        </xsd:attribute>
        <xsd:attribute name="Wavelength" use="optional" type="PositiveFloat">
          <xsd:annotation>
            <xsd:documentation>The Wavelength of the laser. Units are set by WavelengthUnit.</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="WavelengthUnit" use="optional" default="nm" type="UnitsLength">
          <xsd:annotation>
            <xsd:documentation>The units of the Wavelength - default:nanometres[nm].</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="FrequencyMultiplication" use="optional" type="PositiveInt">
          <xsd:annotation>
            <xsd:documentation>FrequencyMultiplication that may be specified. [units:none]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Tuneable" use="optional" type="xsd:boolean">
          <xsd:annotation>
            <xsd:documentation>Whether or not the laser is Tuneable [flag]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Pulse" use="optional">
          <xsd:annotation>
            <xsd:documentation>The Pulse mode of the laser.</xsd:documentation>
          </xsd:annotation>
          <xsd:simpleType>
            <xsd:restriction base="xsd:string">
              <xsd:enumeration value="CW"/>
              <xsd:enumeration value="Single"/>
              <xsd:enumeration value="QSwitched"/>
              <xsd:enumeration value="Repetitive"/>
              <xsd:enumeration value="ModeLocked"/>
              <xsd:enumeration value="Other"/>
            </xsd:restriction>
          </xsd:simpleType>
        </xsd:attribute>
        <xsd:attribute name="PockelCell" use="optional" type="xsd:boolean">
          <xsd:annotation>
            <xsd:documentation>If true the laser has a PockelCell to rotate the polarization of the beam. [flag]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="RepetitionRate" use="optional" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The is the rate in Hz at which the laser pulses if the Pulse type is 'Repetitive'. hertz[Hz] Units are set by RepetitionRateUnit.</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="RepetitionRateUnit" use="optional" default="Hz" type="UnitsFrequency">
          <xsd:annotation>
            <xsd:documentation>The units of the RepetitionRate - default:hertz[Hz].</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Pump
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The Pump element is a reference to a LightSource.  It is used within the Laser element to specify the light source for the laser's pump (if any).
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#Pump_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Used by
Element Laser
Attributes
QName Type Use
ID LightSourceID required
Source
<xsd:element name="Pump">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Pumps</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The Pump element is a reference to a LightSource. It is used within the Laser element to specify the light source for the laser's pump (if any).</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="LightSourceID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Arc
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The Arc element is used to describe various kinds of Arc lamps - Hg, Xe, HgXe.
The Power of the Arc is now stored in the LightSource.
Diagram
Diagram ome_xsd.tmp#ManufacturerSpec_Manufacturer ome_xsd.tmp#ManufacturerSpec_Model ome_xsd.tmp#ManufacturerSpec_SerialNumber ome_xsd.tmp#ManufacturerSpec_LotNumber ome_xsd.tmp#ManufacturerSpec ome_xsd.tmp#LightSource_ID ome_xsd.tmp#LightSource_Power ome_xsd.tmp#LightSource_PowerUnit ome_xsd.tmp#AnnotationRef ome_xsd.tmp#LightSource ome_xsd.tmp#Arc_Type ome_xsd.tmp#LightSourceGroup
Type extension of LightSource
Type hierarchy
Properties
content complex
Substitution Group Affiliation
Model
Children AnnotationRef
Instance
<Arc ID="" LotNumber="" Manufacturer="" Model="" Power="" PowerUnit="mW" SerialNumber="" Type="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Arc>
Attributes
QName Type Default Use Annotation
ID LightSourceID required
A LightSource ID must be specified for each light source, and the individual
light sources can be referred to by their LightSource IDs (eg from Channel).
LotNumber xsd:string optional
The lot number of the component. [plain text string]
Manufacturer xsd:string optional
The manufacturer of the component. [plain text string]
Model xsd:string optional
The Model of the component. [plain text string]
Power xsd:float optional
The light-source power. Units are set by PowerUnit.
PowerUnit UnitsPower mW optional
The units of the Power - default:milliwatts[mW].
SerialNumber xsd:string optional
The serial number of the component. [plain text string]
Type restriction of xsd:string optional
The type of Arc lamp.
Source
<xsd:element name="Arc" substitutionGroup="LightSourceGroup">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Arcs</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The Arc element is used to describe various kinds of Arc lamps - Hg, Xe, HgXe. The Power of the Arc is now stored in the LightSource.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="LightSource">
        <xsd:attribute name="Type" use="optional">
          <xsd:annotation>
            <xsd:documentation>The type of Arc lamp.</xsd:documentation>
          </xsd:annotation>
          <xsd:simpleType>
            <xsd:restriction base="xsd:string">
              <xsd:enumeration value="Hg"/>
              <xsd:enumeration value="Xe"/>
              <xsd:enumeration value="HgXe"/>
              <xsd:enumeration value="Other"/>
            </xsd:restriction>
          </xsd:simpleType>
        </xsd:attribute>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Filament
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The Filament element is used to describe various kinds of filament bulbs such as Incadescent or Halogen.
The Power of the Filament is now stored in the LightSource.
Diagram
Diagram ome_xsd.tmp#ManufacturerSpec_Manufacturer ome_xsd.tmp#ManufacturerSpec_Model ome_xsd.tmp#ManufacturerSpec_SerialNumber ome_xsd.tmp#ManufacturerSpec_LotNumber ome_xsd.tmp#ManufacturerSpec ome_xsd.tmp#LightSource_ID ome_xsd.tmp#LightSource_Power ome_xsd.tmp#LightSource_PowerUnit ome_xsd.tmp#AnnotationRef ome_xsd.tmp#LightSource ome_xsd.tmp#Filament_Type ome_xsd.tmp#LightSourceGroup
Type extension of LightSource
Type hierarchy
Properties
content complex
Substitution Group Affiliation
Model
Children AnnotationRef
Instance
<Filament ID="" LotNumber="" Manufacturer="" Model="" Power="" PowerUnit="mW" SerialNumber="" Type="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Filament>
Attributes
QName Type Default Use Annotation
ID LightSourceID required
A LightSource ID must be specified for each light source, and the individual
light sources can be referred to by their LightSource IDs (eg from Channel).
LotNumber xsd:string optional
The lot number of the component. [plain text string]
Manufacturer xsd:string optional
The manufacturer of the component. [plain text string]
Model xsd:string optional
The Model of the component. [plain text string]
Power xsd:float optional
The light-source power. Units are set by PowerUnit.
PowerUnit UnitsPower mW optional
The units of the Power - default:milliwatts[mW].
SerialNumber xsd:string optional
The serial number of the component. [plain text string]
Type restriction of xsd:string optional
The type of filament.
Source
<xsd:element name="Filament" substitutionGroup="LightSourceGroup">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Filaments</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The Filament element is used to describe various kinds of filament bulbs such as Incadescent or Halogen. The Power of the Filament is now stored in the LightSource.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="LightSource">
        <xsd:attribute name="Type" use="optional">
          <xsd:annotation>
            <xsd:documentation>The type of filament.</xsd:documentation>
          </xsd:annotation>
          <xsd:simpleType>
            <xsd:restriction base="xsd:string">
              <xsd:enumeration value="Incandescent"/>
              <xsd:enumeration value="Halogen"/>
              <xsd:enumeration value="Other"/>
            </xsd:restriction>
          </xsd:simpleType>
        </xsd:attribute>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element LightEmittingDiode
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The LightEmittingDiode element is used to describe
        various kinds of LED lamps.

        As the LightEmittingDiode is inside a LightSource it already has
        available the values from ManufacturerSpec
        (Manufacturer, Model, SerialNumber, LotNumber)
        And the values from LightSource which includes Power in milliwatts

        We have looked at extending this element but have had a problem
        producing a generic solution.

        Possible attributes talked about adding include:
        Power in lumens - but this is complicated by multi-channel
        devices like CoolLED where each channel's power is different
        Wavelength Range - not a simple value so would require
        multiple attributes or a child element
        Angle of Projection - this would be further affected by the
        optics used for filtering the naked LED or that combine
        power from multiple devices

        These values are further affected if you over-drive the LED
        resulting in a more complex system

        Another issue is that LED's may not be used directly for
        illumination but as drivers for secondary emissions from doped
        fiber optics. This would require the fiber optics to be modeled.

        Thanks to Paul Goodwin of Applied Precision of information about
        this topic.
Diagram
Diagram ome_xsd.tmp#ManufacturerSpec_Manufacturer ome_xsd.tmp#ManufacturerSpec_Model ome_xsd.tmp#ManufacturerSpec_SerialNumber ome_xsd.tmp#ManufacturerSpec_LotNumber ome_xsd.tmp#ManufacturerSpec ome_xsd.tmp#LightSource_ID ome_xsd.tmp#LightSource_Power ome_xsd.tmp#LightSource_PowerUnit ome_xsd.tmp#AnnotationRef ome_xsd.tmp#LightSource ome_xsd.tmp#LightSourceGroup
Type extension of LightSource
Type hierarchy
Properties
content complex
Substitution Group Affiliation
Model
Children AnnotationRef
Instance
<LightEmittingDiode ID="" LotNumber="" Manufacturer="" Model="" Power="" PowerUnit="mW" SerialNumber="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</LightEmittingDiode>
Attributes
QName Type Default Use Annotation
ID LightSourceID required
A LightSource ID must be specified for each light source, and the individual
light sources can be referred to by their LightSource IDs (eg from Channel).
LotNumber xsd:string optional
The lot number of the component. [plain text string]
Manufacturer xsd:string optional
The manufacturer of the component. [plain text string]
Model xsd:string optional
The Model of the component. [plain text string]
Power xsd:float optional
The light-source power. Units are set by PowerUnit.
PowerUnit UnitsPower mW optional
The units of the Power - default:milliwatts[mW].
SerialNumber xsd:string optional
The serial number of the component. [plain text string]
Source
<xsd:element name="LightEmittingDiode" substitutionGroup="LightSourceGroup">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>LightEmittingDiodes</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The LightEmittingDiode element is used to describe various kinds of LED lamps. As the LightEmittingDiode is inside a LightSource it already has available the values from ManufacturerSpec (Manufacturer, Model, SerialNumber, LotNumber) And the values from LightSource which includes Power in milliwatts We have looked at extending this element but have had a problem producing a generic solution. Possible attributes talked about adding include: Power in lumens - but this is complicated by multi-channel devices like CoolLED where each channel's power is different Wavelength Range - not a simple value so would require multiple attributes or a child element Angle of Projection - this would be further affected by the optics used for filtering the naked LED or that combine power from multiple devices These values are further affected if you over-drive the LED resulting in a more complex system Another issue is that LED's may not be used directly for illumination but as drivers for secondary emissions from doped fiber optics. This would require the fiber optics to be modeled. Thanks to Paul Goodwin of Applied Precision of information about this topic.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="LightSource"/>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element GenericExcitationSource
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The GenericExcitationSource element is used to represent
a source as a collection of key/value pairs, stored
in a Map. The other lightsource objects should
always be used in preference to this if possible.
Diagram
Diagram ome_xsd.tmp#ManufacturerSpec_Manufacturer ome_xsd.tmp#ManufacturerSpec_Model ome_xsd.tmp#ManufacturerSpec_SerialNumber ome_xsd.tmp#ManufacturerSpec_LotNumber ome_xsd.tmp#ManufacturerSpec ome_xsd.tmp#LightSource_ID ome_xsd.tmp#LightSource_Power ome_xsd.tmp#LightSource_PowerUnit ome_xsd.tmp#AnnotationRef ome_xsd.tmp#LightSource ome_xsd.tmp#GenericExcitationSource_Map ome_xsd.tmp#LightSourceGroup
Type extension of LightSource
Type hierarchy
Properties
content complex
Substitution Group Affiliation
Model
Children AnnotationRef, Map
Instance
<GenericExcitationSource ID="" LotNumber="" Manufacturer="" Model="" Power="" PowerUnit="mW" SerialNumber="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
  <Map>{0,1}</Map>
</GenericExcitationSource>
Attributes
QName Type Default Use Annotation
ID LightSourceID required
A LightSource ID must be specified for each light source, and the individual
light sources can be referred to by their LightSource IDs (eg from Channel).
LotNumber xsd:string optional
The lot number of the component. [plain text string]
Manufacturer xsd:string optional
The manufacturer of the component. [plain text string]
Model xsd:string optional
The Model of the component. [plain text string]
Power xsd:float optional
The light-source power. Units are set by PowerUnit.
PowerUnit UnitsPower mW optional
The units of the Power - default:milliwatts[mW].
SerialNumber xsd:string optional
The serial number of the component. [plain text string]
Source
<xsd:element name="GenericExcitationSource" substitutionGroup="LightSourceGroup">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>GenericExcitationSources</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The GenericExcitationSource element is used to represent a source as a collection of key/value pairs, stored in a Map. The other lightsource objects should always be used in preference to this if possible.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="LightSource">
        <xsd:sequence>
          <xsd:element name="Map" type="Map" minOccurs="0" maxOccurs="1"/>
        </xsd:sequence>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element GenericExcitationSource / Map
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#Map_M ome_xsd.tmp#Map
Type Map
Properties
content complex
minOccurs 0
maxOccurs 1
Model
Children M
Instance
<Map xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <M K="">{0,unbounded}</M>
</Map>
Source
<xsd:element name="Map" type="Map" minOccurs="0" maxOccurs="1"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ChannelRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#ChannelRef_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Attributes
QName Type Use
ID ChannelID required
Source
<xsd:element name="ChannelRef">
  <!-- top level definition -->
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="ChannelID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element ProjectRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
There may be one or more of these in a Dataset.
This empty element has a required Project ID attribute that refers to Projects defined within the OME element.
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#ProjectRef_ID
Type extension of Reference
Type hierarchy
Properties
content complex
Attributes
QName Type Use
ID ProjectID required
Source
<xsd:element name="ProjectRef">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:documentation>There may be one or more of these in a Dataset. This empty element has a required Project ID attribute that refers to Projects defined within the OME element.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Reference">
        <xsd:attribute name="ID" use="required" type="ProjectID"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Rectangle
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A simple rectangle object. If rotation is required apply a
transformation at the Shape level.
Diagram
Diagram ome_xsd.tmp#Shape_FillColor ome_xsd.tmp#Shape_FillRule ome_xsd.tmp#Shape_StrokeColor ome_xsd.tmp#Shape_StrokeWidth ome_xsd.tmp#Shape_StrokeWidthUnit ome_xsd.tmp#Shape_StrokeDashArray ome_xsd.tmp#Shape_Text ome_xsd.tmp#Shape_FontFamily ome_xsd.tmp#Shape_FontSize ome_xsd.tmp#Shape_FontSizeUnit ome_xsd.tmp#Shape_FontStyle ome_xsd.tmp#Shape_Locked ome_xsd.tmp#Shape_ID ome_xsd.tmp#Shape_TheZ ome_xsd.tmp#Shape_TheT ome_xsd.tmp#Shape_TheC ome_xsd.tmp#Shape_Transform ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Shape ome_xsd.tmp#Rectangle_X ome_xsd.tmp#Rectangle_Y ome_xsd.tmp#Rectangle_Width ome_xsd.tmp#Rectangle_Height ome_xsd.tmp#ShapeGroup
Type extension of Shape
Type hierarchy
Properties
content complex
Substitution Group Affiliation
Model
Children AnnotationRef, Transform
Instance
<Rectangle FillColor="" FillRule="" FontFamily="" FontSize="" FontSizeUnit="pt" FontStyle="" Height="" ID="" Locked="" StrokeColor="" StrokeDashArray="" StrokeWidth="" StrokeWidthUnit="pixel" Text="" TheC="" TheT="" TheZ="" Width="" X="" Y="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Transform A00="" A01="" A02="" A10="" A11="" A12="">{0,1}</Transform>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Rectangle>
Attributes
QName Type Default Use Annotation
FillColor Color optional
The color of the fill - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
FillRule restriction of xsd:string optional
FontFamily restriction of xsd:string optional
FontSize NonNegativeInt optional
Size of the font. Units are set by FontSizeUnit.
FontSizeUnit UnitsLength pt optional
The units used for the font size.
FontStyle restriction of xsd:string optional
Height xsd:float required
The height of the rectangle. [units pixels]
ID ShapeID required
Locked xsd:boolean optional
Controls whether the shape is locked and read only,
true is locked, false is editable.
StrokeColor Color optional
The color of the stroke  - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
StrokeDashArray xsd:string optional
e.g. "none", "10 20 30 10"
StrokeWidth xsd:float optional
The width of the stroke. Units are set by StrokeWidthUnit.
StrokeWidthUnit UnitsLength pixel optional
The units used for the stroke width.
Text xsd:string optional
TheC NonNegativeInt optional
The channel the ROI applies to. If not specified then
the ROI applies to all the channels of the image. [units:none]
This is numbered from 0.
TheT NonNegativeInt optional
The timepoint the ROI applies to. If not specified then
the ROI applies to all the timepoints of the image. [units:none]
This is numbered from 0.
TheZ NonNegativeInt optional
The z-section the ROI applies to. If not specified then
the ROI applies to all the z-sections of the image. [units:none]
This is numbered from 0.
Width xsd:float required
The width of the rectangle. [units pixels]
X xsd:float required
The X value of the left edge or the rectangle. [units pixels]
Y xsd:float required
The y value of the top edge or the rectangle. [units pixels]
Source
<xsd:element name="Rectangle" substitutionGroup="ShapeGroup">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Rectangles</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>A simple rectangle object. If rotation is required apply a transformation at the Shape level.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Shape">
        <xsd:attribute name="X" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The X value of the left edge or the rectangle. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Y" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The y value of the top edge or the rectangle. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Width" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The width of the rectangle. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Height" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The height of the rectangle. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Mask
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The Mask ROI shape is a link to a BinData object that is
a BIT mask drawn on top of the image as an ROI. It is applied
at the same scale, pixel to pixel, as the Image the ROI is
applied to, unless a transform is applied at the shape level.
Diagram
Diagram ome_xsd.tmp#Shape_FillColor ome_xsd.tmp#Shape_FillRule ome_xsd.tmp#Shape_StrokeColor ome_xsd.tmp#Shape_StrokeWidth ome_xsd.tmp#Shape_StrokeWidthUnit ome_xsd.tmp#Shape_StrokeDashArray ome_xsd.tmp#Shape_Text ome_xsd.tmp#Shape_FontFamily ome_xsd.tmp#Shape_FontSize ome_xsd.tmp#Shape_FontSizeUnit ome_xsd.tmp#Shape_FontStyle ome_xsd.tmp#Shape_Locked ome_xsd.tmp#Shape_ID ome_xsd.tmp#Shape_TheZ ome_xsd.tmp#Shape_TheT ome_xsd.tmp#Shape_TheC ome_xsd.tmp#Shape_Transform ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Shape ome_xsd.tmp#Mask_X ome_xsd.tmp#Mask_Y ome_xsd.tmp#Mask_Width ome_xsd.tmp#Mask_Height ome_xsd.tmp#BinData ome_xsd.tmp#ShapeGroup
Type extension of Shape
Type hierarchy
Properties
content complex
Substitution Group Affiliation
Model
Children AnnotationRef, BinData, Transform
Instance
<Mask FillColor="" FillRule="" FontFamily="" FontSize="" FontSizeUnit="pt" FontStyle="" Height="" ID="" Locked="" StrokeColor="" StrokeDashArray="" StrokeWidth="" StrokeWidthUnit="pixel" Text="" TheC="" TheT="" TheZ="" Width="" X="" Y="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Transform A00="" A01="" A02="" A10="" A11="" A12="">{0,1}</Transform>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
  <BinData BigEndian="" Compression="none" Length="">{1,1}</BinData>
</Mask>
Attributes
QName Type Default Use Annotation
FillColor Color optional
The color of the fill - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
FillRule restriction of xsd:string optional
FontFamily restriction of xsd:string optional
FontSize NonNegativeInt optional
Size of the font. Units are set by FontSizeUnit.
FontSizeUnit UnitsLength pt optional
The units used for the font size.
FontStyle restriction of xsd:string optional
Height xsd:float required
The height of the mask. [units pixels]
ID ShapeID required
Locked xsd:boolean optional
Controls whether the shape is locked and read only,
true is locked, false is editable.
StrokeColor Color optional
The color of the stroke  - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
StrokeDashArray xsd:string optional
e.g. "none", "10 20 30 10"
StrokeWidth xsd:float optional
The width of the stroke. Units are set by StrokeWidthUnit.
StrokeWidthUnit UnitsLength pixel optional
The units used for the stroke width.
Text xsd:string optional
TheC NonNegativeInt optional
The channel the ROI applies to. If not specified then
the ROI applies to all the channels of the image. [units:none]
This is numbered from 0.
TheT NonNegativeInt optional
The timepoint the ROI applies to. If not specified then
the ROI applies to all the timepoints of the image. [units:none]
This is numbered from 0.
TheZ NonNegativeInt optional
The z-section the ROI applies to. If not specified then
the ROI applies to all the z-sections of the image. [units:none]
This is numbered from 0.
Width xsd:float required
The width of the mask. [units pixels]
X xsd:float required
The X coordinate of the left side of the image. [units pixels]
Y xsd:float required
The Y coordinate of the top side of the image. [units pixels]
Source
<xsd:element name="Mask" substitutionGroup="ShapeGroup">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Masks</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The Mask ROI shape is a link to a BinData object that is a BIT mask drawn on top of the image as an ROI. It is applied at the same scale, pixel to pixel, as the Image the ROI is applied to, unless a transform is applied at the shape level.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Shape">
        <xsd:sequence>
          <xsd:element ref="BinData" minOccurs="1" maxOccurs="1"/>
        </xsd:sequence>
        <xsd:attribute name="X" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The X coordinate of the left side of the image. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Y" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The Y coordinate of the top side of the image. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Width" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The width of the mask. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Height" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The height of the mask. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Point
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#Shape_FillColor ome_xsd.tmp#Shape_FillRule ome_xsd.tmp#Shape_StrokeColor ome_xsd.tmp#Shape_StrokeWidth ome_xsd.tmp#Shape_StrokeWidthUnit ome_xsd.tmp#Shape_StrokeDashArray ome_xsd.tmp#Shape_Text ome_xsd.tmp#Shape_FontFamily ome_xsd.tmp#Shape_FontSize ome_xsd.tmp#Shape_FontSizeUnit ome_xsd.tmp#Shape_FontStyle ome_xsd.tmp#Shape_Locked ome_xsd.tmp#Shape_ID ome_xsd.tmp#Shape_TheZ ome_xsd.tmp#Shape_TheT ome_xsd.tmp#Shape_TheC ome_xsd.tmp#Shape_Transform ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Shape ome_xsd.tmp#Point_X ome_xsd.tmp#Point_Y ome_xsd.tmp#ShapeGroup
Type extension of Shape
Type hierarchy
Properties
content complex
Substitution Group Affiliation
Model
Children AnnotationRef, Transform
Instance
<Point FillColor="" FillRule="" FontFamily="" FontSize="" FontSizeUnit="pt" FontStyle="" ID="" Locked="" StrokeColor="" StrokeDashArray="" StrokeWidth="" StrokeWidthUnit="pixel" Text="" TheC="" TheT="" TheZ="" X="" Y="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Transform A00="" A01="" A02="" A10="" A11="" A12="">{0,1}</Transform>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Point>
Attributes
QName Type Default Use Annotation
FillColor Color optional
The color of the fill - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
FillRule restriction of xsd:string optional
FontFamily restriction of xsd:string optional
FontSize NonNegativeInt optional
Size of the font. Units are set by FontSizeUnit.
FontSizeUnit UnitsLength pt optional
The units used for the font size.
FontStyle restriction of xsd:string optional
ID ShapeID required
Locked xsd:boolean optional
Controls whether the shape is locked and read only,
true is locked, false is editable.
StrokeColor Color optional
The color of the stroke  - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
StrokeDashArray xsd:string optional
e.g. "none", "10 20 30 10"
StrokeWidth xsd:float optional
The width of the stroke. Units are set by StrokeWidthUnit.
StrokeWidthUnit UnitsLength pixel optional
The units used for the stroke width.
Text xsd:string optional
TheC NonNegativeInt optional
The channel the ROI applies to. If not specified then
the ROI applies to all the channels of the image. [units:none]
This is numbered from 0.
TheT NonNegativeInt optional
The timepoint the ROI applies to. If not specified then
the ROI applies to all the timepoints of the image. [units:none]
This is numbered from 0.
TheZ NonNegativeInt optional
The z-section the ROI applies to. If not specified then
the ROI applies to all the z-sections of the image. [units:none]
This is numbered from 0.
X xsd:float required
The X coordinate of the point. [units pixels]
Y xsd:float required
The Y coordinate of the point. [units pixels]
Source
<xsd:element name="Point" substitutionGroup="ShapeGroup">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Points</plural>
      </xsdfu>
    </xsd:appinfo>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Shape">
        <xsd:attribute name="X" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The X coordinate of the point. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Y" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The Y coordinate of the point. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Ellipse
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A simple ellipse object. If rotation is required apply a
transformation at the Shape level.
Diagram
Diagram ome_xsd.tmp#Shape_FillColor ome_xsd.tmp#Shape_FillRule ome_xsd.tmp#Shape_StrokeColor ome_xsd.tmp#Shape_StrokeWidth ome_xsd.tmp#Shape_StrokeWidthUnit ome_xsd.tmp#Shape_StrokeDashArray ome_xsd.tmp#Shape_Text ome_xsd.tmp#Shape_FontFamily ome_xsd.tmp#Shape_FontSize ome_xsd.tmp#Shape_FontSizeUnit ome_xsd.tmp#Shape_FontStyle ome_xsd.tmp#Shape_Locked ome_xsd.tmp#Shape_ID ome_xsd.tmp#Shape_TheZ ome_xsd.tmp#Shape_TheT ome_xsd.tmp#Shape_TheC ome_xsd.tmp#Shape_Transform ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Shape ome_xsd.tmp#Ellipse_X ome_xsd.tmp#Ellipse_Y ome_xsd.tmp#Ellipse_RadiusX ome_xsd.tmp#Ellipse_RadiusY ome_xsd.tmp#ShapeGroup
Type extension of Shape
Type hierarchy
Properties
content complex
Substitution Group Affiliation
Model
Children AnnotationRef, Transform
Instance
<Ellipse FillColor="" FillRule="" FontFamily="" FontSize="" FontSizeUnit="pt" FontStyle="" ID="" Locked="" RadiusX="" RadiusY="" StrokeColor="" StrokeDashArray="" StrokeWidth="" StrokeWidthUnit="pixel" Text="" TheC="" TheT="" TheZ="" X="" Y="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Transform A00="" A01="" A02="" A10="" A11="" A12="">{0,1}</Transform>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Ellipse>
Attributes
QName Type Default Use Annotation
FillColor Color optional
The color of the fill - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
FillRule restriction of xsd:string optional
FontFamily restriction of xsd:string optional
FontSize NonNegativeInt optional
Size of the font. Units are set by FontSizeUnit.
FontSizeUnit UnitsLength pt optional
The units used for the font size.
FontStyle restriction of xsd:string optional
ID ShapeID required
Locked xsd:boolean optional
Controls whether the shape is locked and read only,
true is locked, false is editable.
RadiusX xsd:float required
The horizontal radius of the ellipse. [units pixels]
RadiusY xsd:float required
The vertical radius of the ellipse. [units pixels]
StrokeColor Color optional
The color of the stroke  - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
StrokeDashArray xsd:string optional
e.g. "none", "10 20 30 10"
StrokeWidth xsd:float optional
The width of the stroke. Units are set by StrokeWidthUnit.
StrokeWidthUnit UnitsLength pixel optional
The units used for the stroke width.
Text xsd:string optional
TheC NonNegativeInt optional
The channel the ROI applies to. If not specified then
the ROI applies to all the channels of the image. [units:none]
This is numbered from 0.
TheT NonNegativeInt optional
The timepoint the ROI applies to. If not specified then
the ROI applies to all the timepoints of the image. [units:none]
This is numbered from 0.
TheZ NonNegativeInt optional
The z-section the ROI applies to. If not specified then
the ROI applies to all the z-sections of the image. [units:none]
This is numbered from 0.
X xsd:float required
The X coordinate of the center of the ellipse. [units pixels]
Y xsd:float required
The Y coordinate of the center of the ellipse. [units pixels]
Source
<xsd:element name="Ellipse" substitutionGroup="ShapeGroup">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Ellipses</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>A simple ellipse object. If rotation is required apply a transformation at the Shape level.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Shape">
        <xsd:attribute name="X" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The X coordinate of the center of the ellipse. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Y" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The Y coordinate of the center of the ellipse. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="RadiusX" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The horizontal radius of the ellipse. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="RadiusY" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The vertical radius of the ellipse. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Line
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A straight line defined by it's end points.
Diagram
Diagram ome_xsd.tmp#Shape_FillColor ome_xsd.tmp#Shape_FillRule ome_xsd.tmp#Shape_StrokeColor ome_xsd.tmp#Shape_StrokeWidth ome_xsd.tmp#Shape_StrokeWidthUnit ome_xsd.tmp#Shape_StrokeDashArray ome_xsd.tmp#Shape_Text ome_xsd.tmp#Shape_FontFamily ome_xsd.tmp#Shape_FontSize ome_xsd.tmp#Shape_FontSizeUnit ome_xsd.tmp#Shape_FontStyle ome_xsd.tmp#Shape_Locked ome_xsd.tmp#Shape_ID ome_xsd.tmp#Shape_TheZ ome_xsd.tmp#Shape_TheT ome_xsd.tmp#Shape_TheC ome_xsd.tmp#Shape_Transform ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Shape ome_xsd.tmp#Line_X1 ome_xsd.tmp#Line_Y1 ome_xsd.tmp#Line_X2 ome_xsd.tmp#Line_Y2 ome_xsd.tmp#Line_MarkerStart ome_xsd.tmp#Line_MarkerEnd ome_xsd.tmp#ShapeGroup
Type extension of Shape
Type hierarchy
Properties
content complex
Substitution Group Affiliation
Model
Children AnnotationRef, Transform
Instance
<Line FillColor="" FillRule="" FontFamily="" FontSize="" FontSizeUnit="pt" FontStyle="" ID="" Locked="" MarkerEnd="" MarkerStart="" StrokeColor="" StrokeDashArray="" StrokeWidth="" StrokeWidthUnit="pixel" Text="" TheC="" TheT="" TheZ="" X1="" X2="" Y1="" Y2="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Transform A00="" A01="" A02="" A10="" A11="" A12="">{0,1}</Transform>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Line>
Attributes
QName Type Default Use Annotation
FillColor Color optional
The color of the fill - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
FillRule restriction of xsd:string optional
FontFamily restriction of xsd:string optional
FontSize NonNegativeInt optional
Size of the font. Units are set by FontSizeUnit.
FontSizeUnit UnitsLength pt optional
The units used for the font size.
FontStyle restriction of xsd:string optional
ID ShapeID required
Locked xsd:boolean optional
Controls whether the shape is locked and read only,
true is locked, false is editable.
MarkerEnd Marker optional
MarkerStart Marker optional
StrokeColor Color optional
The color of the stroke  - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
StrokeDashArray xsd:string optional
e.g. "none", "10 20 30 10"
StrokeWidth xsd:float optional
The width of the stroke. Units are set by StrokeWidthUnit.
StrokeWidthUnit UnitsLength pixel optional
The units used for the stroke width.
Text xsd:string optional
TheC NonNegativeInt optional
The channel the ROI applies to. If not specified then
the ROI applies to all the channels of the image. [units:none]
This is numbered from 0.
TheT NonNegativeInt optional
The timepoint the ROI applies to. If not specified then
the ROI applies to all the timepoints of the image. [units:none]
This is numbered from 0.
TheZ NonNegativeInt optional
The z-section the ROI applies to. If not specified then
the ROI applies to all the z-sections of the image. [units:none]
This is numbered from 0.
X1 xsd:float required
The X coordinate of the start of the line. [units pixels]
X2 xsd:float required
The X coordinate of the end of the line. [units pixels]
Y1 xsd:float required
The Y coordinate of the start of the line. [units pixels]
Y2 xsd:float required
The Y coordinate of the end of the line. [units pixels]
Source
<xsd:element name="Line" substitutionGroup="ShapeGroup">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Lines</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>A straight line defined by it's end points.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Shape">
        <xsd:attribute name="X1" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The X coordinate of the start of the line. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Y1" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The Y coordinate of the start of the line. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="X2" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The X coordinate of the end of the line. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Y2" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>The Y coordinate of the end of the line. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="MarkerStart" use="optional" type="Marker"/>
        <xsd:attribute name="MarkerEnd" use="optional" type="Marker"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Polyline
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The Polyline defines open shapes formed of straight
lines. Note: Polyline uses counterclockwise winding (this is the
default OpenGL behavior)
Diagram
Diagram ome_xsd.tmp#Shape_FillColor ome_xsd.tmp#Shape_FillRule ome_xsd.tmp#Shape_StrokeColor ome_xsd.tmp#Shape_StrokeWidth ome_xsd.tmp#Shape_StrokeWidthUnit ome_xsd.tmp#Shape_StrokeDashArray ome_xsd.tmp#Shape_Text ome_xsd.tmp#Shape_FontFamily ome_xsd.tmp#Shape_FontSize ome_xsd.tmp#Shape_FontSizeUnit ome_xsd.tmp#Shape_FontStyle ome_xsd.tmp#Shape_Locked ome_xsd.tmp#Shape_ID ome_xsd.tmp#Shape_TheZ ome_xsd.tmp#Shape_TheT ome_xsd.tmp#Shape_TheC ome_xsd.tmp#Shape_Transform ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Shape ome_xsd.tmp#Polyline_Points ome_xsd.tmp#Polyline_MarkerStart ome_xsd.tmp#Polyline_MarkerEnd ome_xsd.tmp#ShapeGroup
Type extension of Shape
Type hierarchy
Properties
content complex
Substitution Group Affiliation
Model
Children AnnotationRef, Transform
Instance
<Polyline FillColor="" FillRule="" FontFamily="" FontSize="" FontSizeUnit="pt" FontStyle="" ID="" Locked="" MarkerEnd="" MarkerStart="" Points="" StrokeColor="" StrokeDashArray="" StrokeWidth="" StrokeWidthUnit="pixel" Text="" TheC="" TheT="" TheZ="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Transform A00="" A01="" A02="" A10="" A11="" A12="">{0,1}</Transform>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Polyline>
Attributes
QName Type Default Use Annotation
FillColor Color optional
The color of the fill - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
FillRule restriction of xsd:string optional
FontFamily restriction of xsd:string optional
FontSize NonNegativeInt optional
Size of the font. Units are set by FontSizeUnit.
FontSizeUnit UnitsLength pt optional
The units used for the font size.
FontStyle restriction of xsd:string optional
ID ShapeID required
Locked xsd:boolean optional
Controls whether the shape is locked and read only,
true is locked, false is editable.
MarkerEnd Marker optional
MarkerStart Marker optional
Points xsd:string required
The points of the polyline are defined as a list of comma
separated x,y coordinates seperated by spaces like "x1,y1 x2,y2 x3,y3" e.g.
"0,0 1,2 3,5"
StrokeColor Color optional
The color of the stroke  - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
StrokeDashArray xsd:string optional
e.g. "none", "10 20 30 10"
StrokeWidth xsd:float optional
The width of the stroke. Units are set by StrokeWidthUnit.
StrokeWidthUnit UnitsLength pixel optional
The units used for the stroke width.
Text xsd:string optional
TheC NonNegativeInt optional
The channel the ROI applies to. If not specified then
the ROI applies to all the channels of the image. [units:none]
This is numbered from 0.
TheT NonNegativeInt optional
The timepoint the ROI applies to. If not specified then
the ROI applies to all the timepoints of the image. [units:none]
This is numbered from 0.
TheZ NonNegativeInt optional
The z-section the ROI applies to. If not specified then
the ROI applies to all the z-sections of the image. [units:none]
This is numbered from 0.
Source
<xsd:element name="Polyline" substitutionGroup="ShapeGroup">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Polylines</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The Polyline defines open shapes formed of straight lines. Note: Polyline uses counterclockwise winding (this is the default OpenGL behavior)</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Shape">
        <xsd:attribute name="Points" use="required" type="xsd:string">
          <xsd:annotation>
            <xsd:documentation>The points of the polyline are defined as a list of comma separated x,y coordinates seperated by spaces like "x1,y1 x2,y2 x3,y3" e.g. "0,0 1,2 3,5"</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="MarkerStart" use="optional" type="Marker"/>
        <xsd:attribute name="MarkerEnd" use="optional" type="Marker"/>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Polygon
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The Polygon defines closed shapes formed of straight
lines. Note: Polygon uses counterclockwise winding (this is the
default OpenGL behavior)
Diagram
Diagram ome_xsd.tmp#Shape_FillColor ome_xsd.tmp#Shape_FillRule ome_xsd.tmp#Shape_StrokeColor ome_xsd.tmp#Shape_StrokeWidth ome_xsd.tmp#Shape_StrokeWidthUnit ome_xsd.tmp#Shape_StrokeDashArray ome_xsd.tmp#Shape_Text ome_xsd.tmp#Shape_FontFamily ome_xsd.tmp#Shape_FontSize ome_xsd.tmp#Shape_FontSizeUnit ome_xsd.tmp#Shape_FontStyle ome_xsd.tmp#Shape_Locked ome_xsd.tmp#Shape_ID ome_xsd.tmp#Shape_TheZ ome_xsd.tmp#Shape_TheT ome_xsd.tmp#Shape_TheC ome_xsd.tmp#Shape_Transform ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Shape ome_xsd.tmp#Polygon_Points ome_xsd.tmp#ShapeGroup
Type extension of Shape
Type hierarchy
Properties
content complex
Substitution Group Affiliation
Model
Children AnnotationRef, Transform
Instance
<Polygon FillColor="" FillRule="" FontFamily="" FontSize="" FontSizeUnit="pt" FontStyle="" ID="" Locked="" Points="" StrokeColor="" StrokeDashArray="" StrokeWidth="" StrokeWidthUnit="pixel" Text="" TheC="" TheT="" TheZ="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Transform A00="" A01="" A02="" A10="" A11="" A12="">{0,1}</Transform>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Polygon>
Attributes
QName Type Default Use Annotation
FillColor Color optional
The color of the fill - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
FillRule restriction of xsd:string optional
FontFamily restriction of xsd:string optional
FontSize NonNegativeInt optional
Size of the font. Units are set by FontSizeUnit.
FontSizeUnit UnitsLength pt optional
The units used for the font size.
FontStyle restriction of xsd:string optional
ID ShapeID required
Locked xsd:boolean optional
Controls whether the shape is locked and read only,
true is locked, false is editable.
Points xsd:string required
The points of the Polygon are defined as a list of comma
separated x,y coordinates seperated by spaces like "x1,y1 x2,y2 x3,y3" e.g.
"0,0 1,2 3,5"
StrokeColor Color optional
The color of the stroke  - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
StrokeDashArray xsd:string optional
e.g. "none", "10 20 30 10"
StrokeWidth xsd:float optional
The width of the stroke. Units are set by StrokeWidthUnit.
StrokeWidthUnit UnitsLength pixel optional
The units used for the stroke width.
Text xsd:string optional
TheC NonNegativeInt optional
The channel the ROI applies to. If not specified then
the ROI applies to all the channels of the image. [units:none]
This is numbered from 0.
TheT NonNegativeInt optional
The timepoint the ROI applies to. If not specified then
the ROI applies to all the timepoints of the image. [units:none]
This is numbered from 0.
TheZ NonNegativeInt optional
The z-section the ROI applies to. If not specified then
the ROI applies to all the z-sections of the image. [units:none]
This is numbered from 0.
Source
<xsd:element name="Polygon" substitutionGroup="ShapeGroup">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Polygons</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The Polygon defines closed shapes formed of straight lines. Note: Polygon uses counterclockwise winding (this is the default OpenGL behavior)</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Shape">
        <xsd:attribute name="Points" use="required" type="xsd:string">
          <xsd:annotation>
            <xsd:documentation>The points of the Polygon are defined as a list of comma separated x,y coordinates seperated by spaces like "x1,y1 x2,y2 x3,y3" e.g. "0,0 1,2 3,5"</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Element Label
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The text label. Any transformation should be applied at the
shape level.
Diagram
Diagram ome_xsd.tmp#Shape_FillColor ome_xsd.tmp#Shape_FillRule ome_xsd.tmp#Shape_StrokeColor ome_xsd.tmp#Shape_StrokeWidth ome_xsd.tmp#Shape_StrokeWidthUnit ome_xsd.tmp#Shape_StrokeDashArray ome_xsd.tmp#Shape_Text ome_xsd.tmp#Shape_FontFamily ome_xsd.tmp#Shape_FontSize ome_xsd.tmp#Shape_FontSizeUnit ome_xsd.tmp#Shape_FontStyle ome_xsd.tmp#Shape_Locked ome_xsd.tmp#Shape_ID ome_xsd.tmp#Shape_TheZ ome_xsd.tmp#Shape_TheT ome_xsd.tmp#Shape_TheC ome_xsd.tmp#Shape_Transform ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Shape ome_xsd.tmp#Label_X ome_xsd.tmp#Label_Y ome_xsd.tmp#ShapeGroup
Type extension of Shape
Type hierarchy
Properties
content complex
Substitution Group Affiliation
Model
Children AnnotationRef, Transform
Instance
<Label FillColor="" FillRule="" FontFamily="" FontSize="" FontSizeUnit="pt" FontStyle="" ID="" Locked="" StrokeColor="" StrokeDashArray="" StrokeWidth="" StrokeWidthUnit="pixel" Text="" TheC="" TheT="" TheZ="" X="" Y="" xmlns="http://www.openmicroscopy.org/Schemas/OME/2016-06">
  <Transform A00="" A01="" A02="" A10="" A11="" A12="">{0,1}</Transform>
  <AnnotationRef ID="">{0,unbounded}</AnnotationRef>
</Label>
Attributes
QName Type Default Use Annotation
FillColor Color optional
The color of the fill - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
FillRule restriction of xsd:string optional
FontFamily restriction of xsd:string optional
FontSize NonNegativeInt optional
Size of the font. Units are set by FontSizeUnit.
FontSizeUnit UnitsLength pt optional
The units used for the font size.
FontStyle restriction of xsd:string optional
ID ShapeID required
Locked xsd:boolean optional
Controls whether the shape is locked and read only,
true is locked, false is editable.
StrokeColor Color optional
The color of the stroke  - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
StrokeDashArray xsd:string optional
e.g. "none", "10 20 30 10"
StrokeWidth xsd:float optional
The width of the stroke. Units are set by StrokeWidthUnit.
StrokeWidthUnit UnitsLength pixel optional
The units used for the stroke width.
Text xsd:string optional
TheC NonNegativeInt optional
The channel the ROI applies to. If not specified then
the ROI applies to all the channels of the image. [units:none]
This is numbered from 0.
TheT NonNegativeInt optional
The timepoint the ROI applies to. If not specified then
the ROI applies to all the timepoints of the image. [units:none]
This is numbered from 0.
TheZ NonNegativeInt optional
The z-section the ROI applies to. If not specified then
the ROI applies to all the z-sections of the image. [units:none]
This is numbered from 0.
X xsd:float required
This defines the X coordinate of the current text position
of the first character in the string. [units pixels]
Y xsd:float required
This defines the Y coordinate of the current text position
of the first character in the string. [units pixels]
Source
<xsd:element name="Label" substitutionGroup="ShapeGroup">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Labels</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The text label. Any transformation should be applied at the shape level.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexType>
    <xsd:complexContent>
      <xsd:extension base="Shape">
        <xsd:attribute name="X" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>This defines the X coordinate of the current text position of the first character in the string. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
        <xsd:attribute name="Y" use="required" type="xsd:float">
          <xsd:annotation>
            <xsd:documentation>This defines the Y coordinate of the current text position of the first character in the string. [units pixels]</xsd:documentation>
          </xsd:annotation>
        </xsd:attribute>
      </xsd:extension>
    </xsd:complexContent>
  </xsd:complexType>
</xsd:element>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Complex Type Reference
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
Reference is an empty complex type that is contained and extended by all the *Ref elements and also the Settings Complex Type
Each *Ref element defines an attribute named ID of simple type *ID and no other information
Each simple type *ID is restricted to the base type LSID with an appropriate pattern
Diagram
Diagram
Used by
Source
<xsd:complexType name="Reference">
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <abstract/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>Reference is an empty complex type that is contained and extended by all the *Ref elements and also the Settings Complex Type Each *Ref element defines an attribute named ID of simple type *ID and no other information Each simple type *ID is restricted to the base type LSID with an appropriate pattern</xsd:documentation>
  </xsd:annotation>
</xsd:complexType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type ExperimenterID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Experimenter:\S+)|(Experimenter:\S+))
Used by
Source
<xsd:simpleType name="ExperimenterID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Experimenter:\S+)|(Experimenter:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type LSID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
Either LSID or internal consistent IDs for the file
See: http://www.openmicroscopy.org/site/support/file-formats/working-with-ome-xml/id-and-lsid
Diagram
Diagram
Type restriction of xsd:string
Facets
pattern (urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)
Used by
Source
<xsd:simpleType name="LSID">
  <xsd:annotation>
    <xsd:documentation>Either LSID or internal consistent IDs for the file See: http://www.openmicroscopy.org/site/support/file-formats/working-with-ome-xml/id-and-lsid</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:string">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type ExperimenterGroupID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:ExperimenterGroup:\S+)|(ExperimenterGroup:\S+))
Used by
Source
<xsd:simpleType name="ExperimenterGroupID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:ExperimenterGroup:\S+)|(ExperimenterGroup:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type DatasetID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Dataset:\S+)|(Dataset:\S+))
Used by
Source
<xsd:simpleType name="DatasetID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Dataset:\S+)|(Dataset:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type AnnotationID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Annotation:\S+)|(Annotation:\S+))
Used by
Source
<xsd:simpleType name="AnnotationID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Annotation:\S+)|(Annotation:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type ProjectID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Project:\S+)|(Project:\S+))
Used by
Source
<xsd:simpleType name="ProjectID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Project:\S+)|(Project:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type ImageID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Image:\S+)|(Image:\S+))
Used by
Attributes Image/@ID, ImageRef/@ID
Source
<xsd:simpleType name="ImageID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Image:\S+)|(Image:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type FolderID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Folder:\S+)|(Folder:\S+))
Used by
Source
<xsd:simpleType name="FolderID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Folder:\S+)|(Folder:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type ROIID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+)|(\S+))
Used by
Attributes ROI/@ID, ROIRef/@ID
Source
<xsd:simpleType name="ROIID">
  <!-- top level definition -->
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+)|(\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Complex Type Settings
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
Settings is an empty complex type that is contained and extended by all the *Settings elements
Each *Settings element defines an attribute named ID of simple type *ID and the other information that is needed.
Each simple type *ID is restricted to the base type LSID with an appropriate pattern
Diagram
Diagram ome_xsd.tmp#Reference
Type extension of Reference
Type hierarchy
Used by
Source
<xsd:complexType name="Settings">
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <abstract/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>Settings is an empty complex type that is contained and extended by all the *Settings elements Each *Settings element defines an attribute named ID of simple type *ID and the other information that is needed. Each simple type *ID is restricted to the base type LSID with an appropriate pattern</xsd:documentation>
  </xsd:annotation>
  <xsd:complexContent>
    <xsd:extension base="Reference">
    </xsd:extension>
  </xsd:complexContent>
</xsd:complexType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type LightSourceID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:LightSource:\S+)|(LightSource:\S+))
Used by
Source
<xsd:simpleType name="LightSourceID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:LightSource:\S+)|(LightSource:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type PercentFraction
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A simple type that restricts the value to a float between 0 and 1 (inclusive).
Diagram
Diagram
Type restriction of xsd:float
Facets
maxInclusive 1.0
minInclusive 0.0
Used by
Source
<xsd:simpleType name="PercentFraction">
  <xsd:annotation>
    <xsd:documentation>A simple type that restricts the value to a float between 0 and 1 (inclusive).</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:float">
    <xsd:maxInclusive value="1.0"/>
    <xsd:minInclusive value="0.0"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type PositiveFloat
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A simple type that restricts the value to a float between >0 and max 32-bit float {i.e. (2−2^-23) × 2^27 ≈ 3.4 × 10^38}
Diagram
Diagram
Type restriction of xsd:float
Facets
minExclusive 0.0
Used by
Source
<xsd:simpleType name="PositiveFloat">
  <xsd:annotation>
    <xsd:documentation>A simple type that restricts the value to a float between >0 and max 32-bit float {i.e. (2−2^-23) × 2^27 ≈ 3.4 × 10^38}</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:float">
    <xsd:minExclusive value="0.0"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type UnitsLength
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The units used to represent a length
Diagram
Diagram
Type restriction of xsd:string
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Source
<xsd:simpleType name="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units used to represent a length</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:string">
    <xsd:enumeration value="Ym">
      <xsd:annotation>
        <xsd:documentation>yottameter SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="yottameter" plural="yottameter" altname="yottametre" altplural="yottametres" unitsystem="SI.METER" enum="YOTTAMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Zm">
      <xsd:annotation>
        <xsd:documentation>zettameter SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="zettameter" plural="zettameter" altname="zettametre" altplural="zettametres" unitsystem="SI.METER" enum="ZETTAMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Em">
      <xsd:annotation>
        <xsd:documentation>exameter SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="exameter" plural="exameter" altname="exametre" altplural="exametres" unitsystem="SI.METER" enum="EXAMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Pm">
      <xsd:annotation>
        <xsd:documentation>petameter SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="petameter" plural="petameter" altname="petametre" altplural="petametres" unitsystem="SI.METER" enum="PETAMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Tm">
      <xsd:annotation>
        <xsd:documentation>terameter SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="terameter" plural="terameter" altname="terametre" altplural="terametres" unitsystem="SI.METER" enum="TERAMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Gm">
      <xsd:annotation>
        <xsd:documentation>gigameter SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="gigameter" plural="gigameter" altname="gigametre" altplural="gigametres" unitsystem="SI.METER" enum="GIGAMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Mm">
      <xsd:annotation>
        <xsd:documentation>megameter SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="megameter" plural="megameter" altname="megametre" altplural="megametres" unitsystem="SI.METER" enum="MEGAMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="km">
      <xsd:annotation>
        <xsd:documentation>kilometer SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="kilometer" plural="kilometer" altname="kilometre" altplural="kilometres" unitsystem="SI.METER" enum="KILOMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="hm">
      <xsd:annotation>
        <xsd:documentation>hectometer SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="hectometer" plural="hectometer" altname="hectometre" altplural="hectometres" unitsystem="SI.METER" enum="HECTOMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="dam">
      <xsd:annotation>
        <xsd:documentation>decameter SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="decameter" plural="decameter" altname="decametre" altplural="decametres" unitsystem="SI.METER" enum="DECAMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="m">
      <xsd:annotation>
        <xsd:documentation>meter SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="meter" plural="meter" altname="metre" altplural="metres" unitsystem="SI.METER" enum="METER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="dm">
      <xsd:annotation>
        <xsd:documentation>decimeter SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="decimeter" plural="decimeter" altname="decimetre" altplural="decimetres" unitsystem="SI.METER" enum="DECIMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="cm">
      <xsd:annotation>
        <xsd:documentation>centimeter SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="centimeter" plural="centimeter" altname="centimetre" altplural="centimetres" unitsystem="SI.METER" enum="CENTIMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="mm">
      <xsd:annotation>
        <xsd:documentation>millimeter SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="millimeter" plural="millimeter" altname="millimetre" altplural="millimetres" unitsystem="SI.METER" enum="MILLIMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="µm">
      <xsd:annotation>
        <xsd:documentation>micrometer SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="micrometer" plural="micrometer" altname="micrometre" altplural="micrometres" unitsystem="SI.METER" enum="MICROMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="nm">
      <xsd:annotation>
        <xsd:documentation>nanometer SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="nanometer" plural="nanometer" altname="nanometre" altplural="nanometres" unitsystem="SI.METER" enum="NANOMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="pm">
      <xsd:annotation>
        <xsd:documentation>picometer SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="picometer" plural="picometer" altname="picometre" altplural="picometres" unitsystem="SI.METER" enum="PICOMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="fm">
      <xsd:annotation>
        <xsd:documentation>femtometer SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="femtometer" plural="femtometer" altname="femtometre" altplural="femtometres" unitsystem="SI.METER" enum="FEMTOMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="am">
      <xsd:annotation>
        <xsd:documentation>attometer SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="attometer" plural="attometer" altname="attometre" altplural="attometres" unitsystem="SI.METER" enum="ATTOMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="zm">
      <xsd:annotation>
        <xsd:documentation>zeptometer SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="zeptometer" plural="zeptometer" altname="zeptometre" altplural="zeptometres" unitsystem="SI.METER" enum="ZEPTOMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="ym">
      <xsd:annotation>
        <xsd:documentation>yoctometer SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="yoctometer" plural="yoctometer" altname="yoctometre" altplural="yoctometres" unitsystem="SI.METER" enum="YOCTOMETER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Å">
      <xsd:annotation>
        <xsd:documentation>ångström SI-derived unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="ångström" plural="ångströms" unitsystem="SI.METER" enum="ANGSTROM"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="thou">
      <xsd:annotation>
        <xsd:documentation>thou Imperial unit (or mil, 1/1000 inch).</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="thou" plural="thous" unitsystem="Imperial" enum="THOU"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="li">
      <xsd:annotation>
        <xsd:documentation>line Imperial unit (1/12 inch).</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="line" plural="lines" unitsystem="Imperial" enum="LINE"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="in">
      <xsd:annotation>
        <xsd:documentation>inch Imperial unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="inch" plural="inches" unitsystem="Imperial" enum="INCH"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="ft">
      <xsd:annotation>
        <xsd:documentation>foot Imperial unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="foot" plural="feet" unitsystem="Imperial" enum="FOOT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="yd">
      <xsd:annotation>
        <xsd:documentation>yard Imperial unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="yard" plural="yards" unitsystem="Imperial" enum="YARD"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="mi">
      <xsd:annotation>
        <xsd:documentation>terrestrial mile Imperial unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="mile" plural="miles" unitsystem="Imperial" enum="MILE"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="ua">
      <xsd:annotation>
        <xsd:documentation>astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="astronomical unit" plural="astronomical units" unitsystem="SI.METER" enum="ASTRONOMICALUNIT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="ly">
      <xsd:annotation>
        <xsd:documentation>light year.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="light year" plural="light years" unitsystem="SI.METER" enum="LIGHTYEAR"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="pc">
      <xsd:annotation>
        <xsd:documentation>parsec.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="parsec" plural="parsecs" unitsystem="SI.METER" enum="PARSEC"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="pt">
      <xsd:annotation>
        <xsd:documentation>typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="point" plural="points" unitsystem="Imperial" enum="POINT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="pixel">
      <xsd:annotation>
        <xsd:documentation>pixel abstract unit. This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="pixel" plural="pixels" unitsystem="Pixel" enum="PIXEL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="reference frame">
      <xsd:annotation>
        <xsd:documentation>reference frame abstract unit. This is not convertible to any other length unit without a scaling factor. Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="reference frame" unitsystem="ReferenceFrame" enum="REFERENCEFRAME"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type MicrobeamManipulationID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:MicrobeamManipulation:\S+)|(MicrobeamManipulation:\S+))
Used by
Source
<xsd:simpleType name="MicrobeamManipulationID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:MicrobeamManipulation:\S+)|(MicrobeamManipulation:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type ExperimentID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Experiment:\S+)|(Experiment:\S+))
Used by
Source
<xsd:simpleType name="ExperimentID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Experiment:\S+)|(Experiment:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type WellSampleID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:WellSample:\S+)|(WellSample:\S+))
Used by
Source
<xsd:simpleType name="WellSampleID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:WellSample:\S+)|(WellSample:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type NonNegativeInt
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A simple type that restricts the value to an integer between 0 and 2,147,483,647 (inclusive).
Diagram
Diagram
Type restriction of xsd:int
Facets
minInclusive 0
Used by
Source
<xsd:simpleType name="NonNegativeInt">
  <xsd:annotation>
    <xsd:documentation>A simple type that restricts the value to an integer between 0 and 2,147,483,647 (inclusive).</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:int">
    <xsd:minInclusive value="0"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type ReagentID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Reagent:\S+)|(Reagent:\S+))
Used by
Source
<xsd:simpleType name="ReagentID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Reagent:\S+)|(Reagent:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type WellID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Well:\S+)|(Well:\S+))
Used by
Attribute Well/@ID
Source
<xsd:simpleType name="WellID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Well:\S+)|(Well:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type Color
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A simple type that identifies itself as a Color, the value is an integer between -2,147,483,648 and 2,147,483,647 (inclusive).
The value is a signed 32 bit encoding of RGBA so "-1" is #FFFFFFFF or solid white.
NOTE: Prior to the 2012-06 schema the default values were incorrect and produced a transparent red not solid white.
Diagram
Diagram
Type xsd:int
Used by
Source
<xsd:simpleType name="Color">
  <xsd:annotation>
    <xsd:documentation>A simple type that identifies itself as a Color, the value is an integer between -2,147,483,648 and 2,147,483,647 (inclusive). The value is a signed 32 bit encoding of RGBA so "-1" is #FFFFFFFF or solid white. NOTE: Prior to the 2012-06 schema the default values were incorrect and produced a transparent red not solid white.</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:int">
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type PlateAcquisitionID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:PlateAcquisition:\S+)|(PlateAcquisition:\S+))
Used by
Source
<xsd:simpleType name="PlateAcquisitionID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:PlateAcquisition:\S+)|(PlateAcquisition:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type PositiveInt
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A simple type that restricts the value to an integer between 1 and 2,147,483,647 (inclusive).
Diagram
Diagram
Type restriction of xsd:int
Facets
minInclusive 1
Used by
Source
<xsd:simpleType name="PositiveInt">
  <xsd:annotation>
    <xsd:documentation>A simple type that restricts the value to an integer between 1 and 2,147,483,647 (inclusive).</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:int">
    <xsd:minInclusive value="1"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type PlateID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Plate:\S+)|(Plate:\S+))
Used by
Source
<xsd:simpleType name="PlateID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Plate:\S+)|(Plate:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type NamingConvention
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
Predefined list of values for the well labels
Diagram
Diagram
Type restriction of xsd:string
Facets
enumeration letter
While the label type 'number' has a clear meaning the 'letter'
            type is more complex.

            If you have less than 26 values use letters A to Z.
            Once you get more than 26 values there are several different
            approaches in use.
            One we have see include:

            Single letter, then double letter each running A to Z, right first
            e.g. A, B, C, ... X, Y, Z, AA, AB, AC, ... AY, AZ, BA, BB, ...
            This is the format used by Microsoft Excel so users may be familiar with it.
            This is the approach we use in the OMERO client applications.

            CAPITALsmall, each running A to Z, small first
            e.g. Aa, Ab, Ac, ... Ax, Ay, Az, Ba, Bb, Bc, ... By, Bz, Ca, Cb, ...
            This is in use by some plate manufactures.

            Single letter, then double letter, then triple letter, and so on
            e.g. A, B, C, ... X, Y, Z, AA, BB, CC, ... YY, ZZ, AAA, BBB, ...
            This has the advantage that the first 26 are the same as the standard
            but has a problem an the labels get wider and wider leading to user
            interface problems.
enumeration number
1, 2, 3, ...
Used by
Source
<xsd:simpleType name="NamingConvention">
  <xsd:annotation>
    <xsd:documentation>Predefined list of values for the well labels</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:string">
    <xsd:enumeration value="letter">
      <xsd:annotation>
        <xsd:documentation>While the label type 'number' has a clear meaning the 'letter' type is more complex. If you have less than 26 values use letters A to Z. Once you get more than 26 values there are several different approaches in use. One we have see include: Single letter, then double letter each running A to Z, right first e.g. A, B, C, ... X, Y, Z, AA, AB, AC, ... AY, AZ, BA, BB, ... This is the format used by Microsoft Excel so users may be familiar with it. This is the approach we use in the OMERO client applications. CAPITALsmall, each running A to Z, small first e.g. Aa, Ab, Ac, ... Ax, Ay, Az, Ba, Bb, Bc, ... By, Bz, Ca, Cb, ... This is in use by some plate manufactures. Single letter, then double letter, then triple letter, and so on e.g. A, B, C, ... X, Y, Z, AA, BB, CC, ... YY, ZZ, AAA, BBB, ... This has the advantage that the first 26 are the same as the standard but has a problem an the labels get wider and wider leading to user interface problems.</xsd:documentation>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="number">
      <xsd:annotation>
        <xsd:documentation>1, 2, 3, ...</xsd:documentation>
      </xsd:annotation>
    </xsd:enumeration>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type ScreenID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Screen:\S+)|(Screen:\S+))
Used by
Attribute Screen/@ID
Source
<xsd:simpleType name="ScreenID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Screen:\S+)|(Screen:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Complex Type ManufacturerSpec
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This is the base from which many microscope components are extended. E.g Objective, Filter etc.
Provides attributes for recording common properties of these components such as Manufacturer name, Model etc,
all of which are optional.
Diagram
Diagram ome_xsd.tmp#ManufacturerSpec_Manufacturer ome_xsd.tmp#ManufacturerSpec_Model ome_xsd.tmp#ManufacturerSpec_SerialNumber ome_xsd.tmp#ManufacturerSpec_LotNumber
Used by
Attributes
QName Type Use Annotation
LotNumber xsd:string optional
The lot number of the component. [plain text string]
Manufacturer xsd:string optional
The manufacturer of the component. [plain text string]
Model xsd:string optional
The Model of the component. [plain text string]
SerialNumber xsd:string optional
The serial number of the component. [plain text string]
Source
<xsd:complexType name="ManufacturerSpec">
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <abstract/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>This is the base from which many microscope components are extended. E.g Objective, Filter etc. Provides attributes for recording common properties of these components such as Manufacturer name, Model etc, all of which are optional.</xsd:documentation>
  </xsd:annotation>
  <xsd:attribute name="Manufacturer" use="optional" type="xsd:string">
    <xsd:annotation>
      <xsd:documentation>The manufacturer of the component. [plain text string]</xsd:documentation>
    </xsd:annotation>
  </xsd:attribute>
  <xsd:attribute name="Model" use="optional" type="xsd:string">
    <xsd:annotation>
      <xsd:documentation>The Model of the component. [plain text string]</xsd:documentation>
    </xsd:annotation>
  </xsd:attribute>
  <xsd:attribute name="SerialNumber" use="optional" type="xsd:string">
    <xsd:annotation>
      <xsd:documentation>The serial number of the component. [plain text string]</xsd:documentation>
    </xsd:annotation>
  </xsd:attribute>
  <xsd:attribute name="LotNumber" use="optional" type="xsd:string">
    <xsd:annotation>
      <xsd:documentation>The lot number of the component. [plain text string]</xsd:documentation>
    </xsd:annotation>
  </xsd:attribute>
</xsd:complexType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Complex Type LightSource
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The lightsource for the instrument.  An instrument may have several light sources.
The type of lightsource is specified by one of the child-elements which are 'Laser', 'Filament', 'Arc' or 'LightEmittingDiode'.
Each of the light source types has its own Type attribute to further differentiate the light source
(eg, Nd-YAG for Laser or Hg for Arc).
Diagram
Diagram ome_xsd.tmp#ManufacturerSpec_Manufacturer ome_xsd.tmp#ManufacturerSpec_Model ome_xsd.tmp#ManufacturerSpec_SerialNumber ome_xsd.tmp#ManufacturerSpec_LotNumber ome_xsd.tmp#ManufacturerSpec ome_xsd.tmp#LightSource_ID ome_xsd.tmp#LightSource_Power ome_xsd.tmp#LightSource_PowerUnit ome_xsd.tmp#AnnotationRef
Type extension of ManufacturerSpec
Type hierarchy
Used by
Model
Children AnnotationRef
Attributes
QName Type Default Use Annotation
ID LightSourceID required
A LightSource ID must be specified for each light source, and the individual
light sources can be referred to by their LightSource IDs (eg from Channel).
LotNumber xsd:string optional
The lot number of the component. [plain text string]
Manufacturer xsd:string optional
The manufacturer of the component. [plain text string]
Model xsd:string optional
The Model of the component. [plain text string]
Power xsd:float optional
The light-source power. Units are set by PowerUnit.
PowerUnit UnitsPower mW optional
The units of the Power - default:milliwatts[mW].
SerialNumber xsd:string optional
The serial number of the component. [plain text string]
Source
<xsd:complexType name="LightSource">
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>LightSources</plural>
        <abstract/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The lightsource for the instrument. An instrument may have several light sources. The type of lightsource is specified by one of the child-elements which are 'Laser', 'Filament', 'Arc' or 'LightEmittingDiode'. Each of the light source types has its own Type attribute to further differentiate the light source (eg, Nd-YAG for Laser or Hg for Arc).</xsd:documentation>
  </xsd:annotation>
  <xsd:complexContent>
    <xsd:extension base="ManufacturerSpec">
      <xsd:sequence>
        <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
          <xsd:annotation>
            <xsd:appinfo>
              <xsdfu xmlns="">
                <manytomany/>
              </xsdfu>
            </xsd:appinfo>
          </xsd:annotation>
        </xsd:element>
      </xsd:sequence>
      <xsd:attribute name="ID" use="required" type="LightSourceID">
        <xsd:annotation>
          <xsd:documentation>A LightSource ID must be specified for each light source, and the individual light sources can be referred to by their LightSource IDs (eg from Channel).</xsd:documentation>
        </xsd:annotation>
      </xsd:attribute>
      <xsd:attribute name="Power" use="optional" type="xsd:float">
        <xsd:annotation>
          <xsd:documentation>The light-source power. Units are set by PowerUnit.</xsd:documentation>
        </xsd:annotation>
      </xsd:attribute>
      <xsd:attribute name="PowerUnit" use="optional" default="mW" type="UnitsPower">
        <xsd:annotation>
          <xsd:documentation>The units of the Power - default:milliwatts[mW].</xsd:documentation>
        </xsd:annotation>
      </xsd:attribute>
    </xsd:extension>
  </xsd:complexContent>
</xsd:complexType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type UnitsPower
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The units used to represent power
Diagram
Diagram
Type restriction of xsd:string
Facets
enumeration YW
yottawatt unit.
enumeration ZW
zettawatt unit.
enumeration EW
exawatt unit.
enumeration PW
petawatt unit.
enumeration TW
terawatt unit.
enumeration GW
gigawatt unit.
enumeration MW
megawatt unit.
enumeration kW
kilowatt unit.
enumeration hW
hectowatt unit.
enumeration daW
decawatt unit.
enumeration W
watt unit.
enumeration dW
deciwatt unit.
enumeration cW
centiwatt unit.
enumeration mW
milliwatt unit.
enumeration µW
microwatt unit.
enumeration nW
nanowatt unit.
enumeration pW
picowatt unit.
enumeration fW
femtowatt unit.
enumeration aW
attowatt unit.
enumeration zW
zeptowatt unit.
enumeration yW
yoctowatt unit.
Used by
Source
<xsd:simpleType name="UnitsPower">
  <xsd:annotation>
    <xsd:documentation>The units used to represent power</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:string">
    <xsd:enumeration value="YW">
      <xsd:annotation>
        <xsd:documentation>yottawatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="yottawatt" plural="yottawatts" unitsystem="SI.WATT" enum="YOTTAWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="ZW">
      <xsd:annotation>
        <xsd:documentation>zettawatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="zettawatt" plural="zettawatts" unitsystem="SI.WATT" enum="ZETTAWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="EW">
      <xsd:annotation>
        <xsd:documentation>exawatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="exawatt" plural="exawatts" unitsystem="SI.WATT" enum="EXAWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="PW">
      <xsd:annotation>
        <xsd:documentation>petawatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="petawatt" plural="petawatts" unitsystem="SI.WATT" enum="PETAWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="TW">
      <xsd:annotation>
        <xsd:documentation>terawatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="terawatt" plural="terawatts" unitsystem="SI.WATT" enum="TERAWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="GW">
      <xsd:annotation>
        <xsd:documentation>gigawatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="gigawatt" plural="gigawatts" unitsystem="SI.WATT" enum="GIGAWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="MW">
      <xsd:annotation>
        <xsd:documentation>megawatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="megawatt" plural="megawatts" unitsystem="SI.WATT" enum="MEGAWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="kW">
      <xsd:annotation>
        <xsd:documentation>kilowatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="kilowatt" plural="kilowatts" unitsystem="SI.WATT" enum="KILOWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="hW">
      <xsd:annotation>
        <xsd:documentation>hectowatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="hectowatt" plural="hectowatts" unitsystem="SI.WATT" enum="HECTOWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="daW">
      <xsd:annotation>
        <xsd:documentation>decawatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="decawatt" plural="decawatts" unitsystem="SI.WATT" enum="DECAWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="W">
      <xsd:annotation>
        <xsd:documentation>watt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="watt" plural="watts" unitsystem="SI.WATT" enum="WATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="dW">
      <xsd:annotation>
        <xsd:documentation>deciwatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="deciwatt" plural="deciwatts" unitsystem="SI.WATT" enum="DECIWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="cW">
      <xsd:annotation>
        <xsd:documentation>centiwatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="centiwatt" plural="centiwatts" unitsystem="SI.WATT" enum="CENTIWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="mW">
      <xsd:annotation>
        <xsd:documentation>milliwatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="milliwatt" plural="milliwatts" unitsystem="SI.WATT" enum="MILLIWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="µW">
      <xsd:annotation>
        <xsd:documentation>microwatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="microwatt" plural="microwatts" unitsystem="SI.WATT" enum="MICROWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="nW">
      <xsd:annotation>
        <xsd:documentation>nanowatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="nanowatt" plural="nanowatts" unitsystem="SI.WATT" enum="NANOWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="pW">
      <xsd:annotation>
        <xsd:documentation>picowatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="picowatt" plural="picowatts" unitsystem="SI.WATT" enum="PICOWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="fW">
      <xsd:annotation>
        <xsd:documentation>femtowatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="femtowatt" plural="femtowatts" unitsystem="SI.WATT" enum="FEMTOWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="aW">
      <xsd:annotation>
        <xsd:documentation>attowatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="attowatt" plural="attowatts" unitsystem="SI.WATT" enum="ATTOWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="zW">
      <xsd:annotation>
        <xsd:documentation>zeptowatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="zeptowatt" plural="zeptowatts" unitsystem="SI.WATT" enum="ZEPTOWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="yW">
      <xsd:annotation>
        <xsd:documentation>yoctowatt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="yoctowatt" plural="yoctowatts" unitsystem="SI.WATT" enum="YOCTOWATT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type UnitsElectricPotential
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The units used to represent an electric potential
Diagram
Diagram
Type restriction of xsd:string
Facets
enumeration YV
yottavolt unit.
enumeration ZV
zettavolt unit.
enumeration EV
exavolt unit.
enumeration PV
petavolt unit.
enumeration TV
teravolt unit.
enumeration GV
gigavolt unit.
enumeration MV
megavolt unit.
enumeration kV
kilovolt unit.
enumeration hV
hectovolt unit.
enumeration daV
decavolt unit.
enumeration V
volt unit.
enumeration dV
decivolt unit.
enumeration cV
centivolt unit.
enumeration mV
millivolt unit.
enumeration µV
microvolt unit.
enumeration nV
nanovolt unit.
enumeration pV
picovolt unit.
enumeration fV
femtovolt unit.
enumeration aV
attovolt unit.
enumeration zV
zeptovolt unit.
enumeration yV
yoctovolt unit.
Used by
Source
<xsd:simpleType name="UnitsElectricPotential">
  <xsd:annotation>
    <xsd:documentation>The units used to represent an electric potential</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:string">
    <xsd:enumeration value="YV">
      <xsd:annotation>
        <xsd:documentation>yottavolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="yottavolt" plural="yottavolts" unitsystem="SI.VOLT" enum="YOTTAVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="ZV">
      <xsd:annotation>
        <xsd:documentation>zettavolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="zettavolt" plural="zettavolts" unitsystem="SI.VOLT" enum="ZETTAVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="EV">
      <xsd:annotation>
        <xsd:documentation>exavolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="exavolt" plural="exavolts" unitsystem="SI.VOLT" enum="EXAVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="PV">
      <xsd:annotation>
        <xsd:documentation>petavolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="petavolt" plural="petavolts" unitsystem="SI.VOLT" enum="PETAVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="TV">
      <xsd:annotation>
        <xsd:documentation>teravolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="teravolt" plural="teravolts" unitsystem="SI.VOLT" enum="TERAVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="GV">
      <xsd:annotation>
        <xsd:documentation>gigavolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="gigavolt" plural="gigavolts" unitsystem="SI.VOLT" enum="GIGAVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="MV">
      <xsd:annotation>
        <xsd:documentation>megavolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="megavolt" plural="megavolts" unitsystem="SI.VOLT" enum="MEGAVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="kV">
      <xsd:annotation>
        <xsd:documentation>kilovolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="kilovolt" plural="kilovolts" unitsystem="SI.VOLT" enum="KILOVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="hV">
      <xsd:annotation>
        <xsd:documentation>hectovolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="hectovolt" plural="hectovolts" unitsystem="SI.VOLT" enum="HECTOVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="daV">
      <xsd:annotation>
        <xsd:documentation>decavolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="decavolt" plural="decavolts" unitsystem="SI.VOLT" enum="DECAVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="V">
      <xsd:annotation>
        <xsd:documentation>volt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="volt" plural="volts" unitsystem="SI.VOLT" enum="VOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="dV">
      <xsd:annotation>
        <xsd:documentation>decivolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="decivolt" plural="decivolts" unitsystem="SI.VOLT" enum="DECIVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="cV">
      <xsd:annotation>
        <xsd:documentation>centivolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="centivolt" plural="centivolts" unitsystem="SI.VOLT" enum="CENTIVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="mV">
      <xsd:annotation>
        <xsd:documentation>millivolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="millivolt" plural="millivolts" unitsystem="SI.VOLT" enum="MILLIVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="µV">
      <xsd:annotation>
        <xsd:documentation>microvolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="microvolt" plural="microvolts" unitsystem="SI.VOLT" enum="MICROVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="nV">
      <xsd:annotation>
        <xsd:documentation>nanovolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="nanovolt" plural="nanovolts" unitsystem="SI.VOLT" enum="NANOVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="pV">
      <xsd:annotation>
        <xsd:documentation>picovolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="picovolt" plural="picovolts" unitsystem="SI.VOLT" enum="PICOVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="fV">
      <xsd:annotation>
        <xsd:documentation>femtovolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="femtovolt" plural="femtovolts" unitsystem="SI.VOLT" enum="FEMTOVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="aV">
      <xsd:annotation>
        <xsd:documentation>attovolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="attovolt" plural="attovolts" unitsystem="SI.VOLT" enum="ATTOVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="zV">
      <xsd:annotation>
        <xsd:documentation>zeptovolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="zeptovolt" plural="zeptovolts" unitsystem="SI.VOLT" enum="ZEPTOVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="yV">
      <xsd:annotation>
        <xsd:documentation>yoctovolt unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="yoctovolt" plural="yoctovolts" unitsystem="SI.VOLT" enum="YOCTOVOLT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type DetectorID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Detector:\S+)|(Detector:\S+))
Used by
Source
<xsd:simpleType name="DetectorID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Detector:\S+)|(Detector:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type ObjectiveID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Objective:\S+)|(Objective:\S+))
Used by
Source
<xsd:simpleType name="ObjectiveID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Objective:\S+)|(Objective:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Complex Type FilterRef
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#Reference ome_xsd.tmp#FilterRef_ID
Type extension of Reference
Type hierarchy
Used by
Attributes
QName Type Use
ID FilterID required
Source
<xsd:complexType name="FilterRef">
  <!-- top level definition -->
  <xsd:complexContent>
    <xsd:extension base="Reference">
      <xsd:attribute name="ID" use="required" type="FilterID"/>
    </xsd:extension>
  </xsd:complexContent>
</xsd:complexType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type FilterID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Filter:\S+)|(Filter:\S+))
Used by
Source
<xsd:simpleType name="FilterID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Filter:\S+)|(Filter:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type DichroicID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Dichroic:\S+)|(Dichroic:\S+))
Used by
Source
<xsd:simpleType name="DichroicID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Dichroic:\S+)|(Dichroic:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type FilterSetID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:FilterSet:\S+)|(FilterSet:\S+))
Used by
Source
<xsd:simpleType name="FilterSetID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:FilterSet:\S+)|(FilterSet:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type NonNegativeFloat
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A simple type that restricts the value to a float between >=0 and max 32-bit float {i.e. (2−2^-23) × 2^27 ≈ 3.4 × 10^38}
Diagram
Diagram
Type restriction of xsd:float
Facets
minInclusive 0
Used by
Source
<xsd:simpleType name="NonNegativeFloat">
  <xsd:annotation>
    <xsd:documentation>A simple type that restricts the value to a float between >=0 and max 32-bit float {i.e. (2−2^-23) × 2^27 ≈ 3.4 × 10^38}</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:float">
    <xsd:minInclusive value="0"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type InstrumentID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Instrument:\S+)|(Instrument:\S+))
Used by
Source
<xsd:simpleType name="InstrumentID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Instrument:\S+)|(Instrument:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Complex Type Map
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This is a Mapping of key/value pairs.
Diagram
Diagram ome_xsd.tmp#Map_M
Used by
Model
Children M
Source
<xsd:complexType name="Map">
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Maps</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>This is a Mapping of key/value pairs.</xsd:documentation>
  </xsd:annotation>
  <xsd:sequence minOccurs="1" maxOccurs="1">
    <xsd:element name="M" minOccurs="0" maxOccurs="unbounded">
      <xsd:annotation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <plural>Ms</plural>
          </xsdfu>
        </xsd:appinfo>
        <xsd:documentation>This is a key/value pair used to build up a Mapping. The Element and Attribute name are kept to single letters to minimize the length at the expense of readability as they are likely to occur many times.</xsd:documentation>
      </xsd:annotation>
      <xsd:complexType>
        <xsd:simpleContent>
          <xsd:extension base="xsd:string">
            <xsd:attribute name="K" type="xsd:string"/>
          </xsd:extension>
        </xsd:simpleContent>
      </xsd:complexType>
    </xsd:element>
  </xsd:sequence>
</xsd:complexType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type UnitsTemperature
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The units used to represent a temperature
Diagram
Diagram
Type restriction of xsd:string
Facets
enumeration °C
degree Celsius unit.
enumeration °F
degree Fahrenheit unit.
enumeration K
Kelvin unit.
enumeration °R
degree Rankine unit.
Used by
Source
<xsd:simpleType name="UnitsTemperature">
  <xsd:annotation>
    <xsd:documentation>The units used to represent a temperature</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:string">
    <xsd:enumeration value="°C">
      <xsd:annotation>
        <xsd:documentation>degree Celsius unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="celsius" unitsystem="SI.KELVIN" enum="CELSIUS"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="°F">
      <xsd:annotation>
        <xsd:documentation>degree Fahrenheit unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="fahrenheit" unitsystem="SI.KELVIN" enum="FAHRENHEIT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="K">
      <xsd:annotation>
        <xsd:documentation>Kelvin unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="kelvin" plural="kelvins" unitsystem="SI.KELVIN" enum="KELVIN"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="°R">
      <xsd:annotation>
        <xsd:documentation>degree Rankine unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="rankine" unitsystem="SI.KELVIN" enum="RANKINE"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type UnitsPressure
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The units used to represent a pressure
Diagram
Diagram
Type restriction of xsd:string
Facets
enumeration YPa
yottapascal SI unit.
enumeration ZPa
zettapascal SI unit.
enumeration EPa
exapascal SI unit.
enumeration PPa
petapascal SI unit.
enumeration TPa
terapascal SI unit.
enumeration GPa
gigapascal SI unit.
enumeration MPa
megapascal SI unit.
enumeration kPa
kilopascal SI unit.
enumeration hPa
hectopascal SI unit.
enumeration daPa
decapascal SI unit.
enumeration Pa
pascal SI unit.  Note the C++ enum is mixed case due to PASCAL being a macro used by the Microsoft C and C++ compiler.
enumeration dPa
decipascal SI unit.
enumeration cPa
centipascal SI unit.
enumeration mPa
millipascal SI unit.
enumeration µPa
micropascal SI unit.
enumeration nPa
nanopascal SI unit.
enumeration pPa
picopascal SI unit.
enumeration fPa
femtopascal SI unit.
enumeration aPa
attopascal SI unit.
enumeration zPa
zeptopascal SI unit.
enumeration yPa
yoctopascal SI unit.
enumeration bar
bar SI-derived unit.
enumeration Mbar
megabar SI-derived unit.
enumeration kbar
kilobar SI-derived unit.
enumeration dbar
decibar SI-derived unit.
enumeration cbar
centibar SI-derived unit.
enumeration mbar
millibar SI-derived unit.
enumeration atm
standard atmosphere SI-derived unit.
enumeration psi
pound-force per square inch Imperial unit.
enumeration Torr
torr SI-derived unit.
enumeration mTorr
millitorr SI-derived unit.
enumeration mm Hg
millimetre of mercury SI-derived unit
Used by
Source
<xsd:simpleType name="UnitsPressure">
  <xsd:annotation>
    <xsd:documentation>The units used to represent a pressure</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:string">
    <xsd:enumeration value="YPa">
      <xsd:annotation>
        <xsd:documentation>yottapascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="yottapascal" plural="yottapascals" unitsystem="SI.PASCAL" enum="YOTTAPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="ZPa">
      <xsd:annotation>
        <xsd:documentation>zettapascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="zettapascal" plural="zettapascals" unitsystem="SI.PASCAL" enum="ZETTAPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="EPa">
      <xsd:annotation>
        <xsd:documentation>exapascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="exapascal" plural="exapascals" unitsystem="SI.PASCAL" enum="EXAPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="PPa">
      <xsd:annotation>
        <xsd:documentation>petapascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="petapascal" plural="petapascals" unitsystem="SI.PASCAL" enum="PETAPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="TPa">
      <xsd:annotation>
        <xsd:documentation>terapascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="terapascal" plural="terapascals" unitsystem="SI.PASCAL" enum="TERAPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="GPa">
      <xsd:annotation>
        <xsd:documentation>gigapascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="gigapascal" plural="gigapascals" unitsystem="SI.PASCAL" enum="GIGAPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="MPa">
      <xsd:annotation>
        <xsd:documentation>megapascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="megapascal" plural="megapascals" unitsystem="SI.PASCAL" enum="MEGAPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="kPa">
      <xsd:annotation>
        <xsd:documentation>kilopascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="kilopascal" plural="kilopascals" unitsystem="SI.PASCAL" enum="KILOPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="hPa">
      <xsd:annotation>
        <xsd:documentation>hectopascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="hectopascal" plural="hectopascals" unitsystem="SI.PASCAL" enum="HECTOPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="daPa">
      <xsd:annotation>
        <xsd:documentation>decapascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="decapascal" plural="decapascals" unitsystem="SI.PASCAL" enum="DECAPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Pa">
      <xsd:annotation>
        <xsd:documentation>pascal SI unit. Note the C++ enum is mixed case due to PASCAL being a macro used by the Microsoft C and C++ compiler.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="pascal" plural="pascals" unitsystem="SI.PASCAL" enum="PASCAL" cppenum="Pascal"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="dPa">
      <xsd:annotation>
        <xsd:documentation>decipascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="decipascal" plural="decipascals" unitsystem="SI.PASCAL" enum="DECIPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="cPa">
      <xsd:annotation>
        <xsd:documentation>centipascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="centipascal" plural="centipascals" unitsystem="SI.PASCAL" enum="CENTIPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="mPa">
      <xsd:annotation>
        <xsd:documentation>millipascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="millipascal" plural="millipascals" unitsystem="SI.PASCAL" enum="MILLIPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="µPa">
      <xsd:annotation>
        <xsd:documentation>micropascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="micropascal" plural="micropascals" unitsystem="SI.PASCAL" enum="MICROPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="nPa">
      <xsd:annotation>
        <xsd:documentation>nanopascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="nanopascal" plural="nanopascals" unitsystem="SI.PASCAL" enum="NANOPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="pPa">
      <xsd:annotation>
        <xsd:documentation>picopascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="picopascal" plural="picopascals" unitsystem="SI.PASCAL" enum="PICOPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="fPa">
      <xsd:annotation>
        <xsd:documentation>femtopascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="femtopascal" plural="femtopascals" unitsystem="SI.PASCAL" enum="FEMTOPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="aPa">
      <xsd:annotation>
        <xsd:documentation>attopascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="attopascal" plural="attopascals" unitsystem="SI.PASCAL" enum="ATTOPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="zPa">
      <xsd:annotation>
        <xsd:documentation>zeptopascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="zeptopascal" plural="zeptopascals" unitsystem="SI.PASCAL" enum="ZEPTOPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="yPa">
      <xsd:annotation>
        <xsd:documentation>yoctopascal SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="yoctopascal" plural="yoctopascals" unitsystem="SI.PASCAL" enum="YOCTOPASCAL"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="bar">
      <xsd:annotation>
        <xsd:documentation>bar SI-derived unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="bar" plural="bars" unitsystem="SI.PASCAL" enum="BAR"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Mbar">
      <xsd:annotation>
        <xsd:documentation>megabar SI-derived unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="megabar" plural="megabars" unitsystem="SI.PASCAL" enum="MEGABAR"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="kbar">
      <xsd:annotation>
        <xsd:documentation>kilobar SI-derived unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="kilobar" plural="kilobars" unitsystem="SI.PASCAL" enum="KILOBAR"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="dbar">
      <xsd:annotation>
        <xsd:documentation>decibar SI-derived unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="decibar" plural="decibars" unitsystem="SI.PASCAL" enum="DECIBAR"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="cbar">
      <xsd:annotation>
        <xsd:documentation>centibar SI-derived unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="centibar" plural="centibars" unitsystem="SI.PASCAL" enum="CENTIBAR"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="mbar">
      <xsd:annotation>
        <xsd:documentation>millibar SI-derived unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="millibar" plural="millibars" unitsystem="SI.PASCAL" enum="MILLIBAR"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="atm">
      <xsd:annotation>
        <xsd:documentation>standard atmosphere SI-derived unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="atmosphere" plural="atmospheres" unitsystem="SI.PASCAL" enum="ATMOSPHERE"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="psi">
      <xsd:annotation>
        <xsd:documentation>pound-force per square inch Imperial unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="psi" unitsystem="SI.PASCAL" enum="PSI"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Torr">
      <xsd:annotation>
        <xsd:documentation>torr SI-derived unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="torr" plural="torrs" unitsystem="SI.PASCAL" enum="TORR"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="mTorr">
      <xsd:annotation>
        <xsd:documentation>millitorr SI-derived unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="millitorr" plural="millitorrs" unitsystem="SI.PASCAL" enum="MILLITORR"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="mm Hg">
      <xsd:annotation>
        <xsd:documentation>millimetre of mercury SI-derived unit</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="mmhg" unitsystem="SI.PASCAL" enum="MMHG"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type UnitsFrequency
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The units used to represent frequency
Diagram
Diagram
Type restriction of xsd:string
Facets
enumeration YHz
yottahertz unit.
enumeration ZHz
zettahertz unit.
enumeration EHz
exahertz unit.
enumeration PHz
petahertz unit.
enumeration THz
terahertz unit.
enumeration GHz
gigahertz unit.
enumeration MHz
megahertz unit.
enumeration kHz
kilohertz unit.
enumeration hHz
hectohertz unit.
enumeration daHz
decahertz unit.
enumeration Hz
hertz unit.
enumeration dHz
decihertz unit.
enumeration cHz
centihertz unit.
enumeration mHz
millihertz unit.
enumeration µHz
microhertz unit.
enumeration nHz
nanohertz unit.
enumeration pHz
picohertz unit.
enumeration fHz
femtohertz unit.
enumeration aHz
attohertz unit.
enumeration zHz
zeptohertz unit.
enumeration yHz
yoctohertz unit.
Used by
Source
<xsd:simpleType name="UnitsFrequency">
  <xsd:annotation>
    <xsd:documentation>The units used to represent frequency</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:string">
    <xsd:enumeration value="YHz">
      <xsd:annotation>
        <xsd:documentation>yottahertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="yottahertz" unitsystem="SI.HERTZ" enum="YOTTAHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="ZHz">
      <xsd:annotation>
        <xsd:documentation>zettahertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="zettahertz" unitsystem="SI.HERTZ" enum="ZETTAHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="EHz">
      <xsd:annotation>
        <xsd:documentation>exahertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="exahertz" unitsystem="SI.HERTZ" enum="EXAHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="PHz">
      <xsd:annotation>
        <xsd:documentation>petahertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="petahertz" unitsystem="SI.HERTZ" enum="PETAHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="THz">
      <xsd:annotation>
        <xsd:documentation>terahertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="terahertz" unitsystem="SI.HERTZ" enum="TERAHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="GHz">
      <xsd:annotation>
        <xsd:documentation>gigahertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="gigahertz" unitsystem="SI.HERTZ" enum="GIGAHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="MHz">
      <xsd:annotation>
        <xsd:documentation>megahertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="megahertz" unitsystem="SI.HERTZ" enum="MEGAHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="kHz">
      <xsd:annotation>
        <xsd:documentation>kilohertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="kilohertz" unitsystem="SI.HERTZ" enum="KILOHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="hHz">
      <xsd:annotation>
        <xsd:documentation>hectohertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="hectohertz" unitsystem="SI.HERTZ" enum="HECTOHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="daHz">
      <xsd:annotation>
        <xsd:documentation>decahertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="decahertz" unitsystem="SI.HERTZ" enum="DECAHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Hz">
      <xsd:annotation>
        <xsd:documentation>hertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="hertz" unitsystem="SI.HERTZ" enum="HERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="dHz">
      <xsd:annotation>
        <xsd:documentation>decihertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="decihertz" unitsystem="SI.HERTZ" enum="DECIHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="cHz">
      <xsd:annotation>
        <xsd:documentation>centihertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="centihertz" unitsystem="SI.HERTZ" enum="CENTIHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="mHz">
      <xsd:annotation>
        <xsd:documentation>millihertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="millihertz" unitsystem="SI.HERTZ" enum="MILLIHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="µHz">
      <xsd:annotation>
        <xsd:documentation>microhertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="microhertz" unitsystem="SI.HERTZ" enum="MICROHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="nHz">
      <xsd:annotation>
        <xsd:documentation>nanohertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="nanohertz" unitsystem="SI.HERTZ" enum="NANOHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="pHz">
      <xsd:annotation>
        <xsd:documentation>picohertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="picohertz" unitsystem="SI.HERTZ" enum="PICOHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="fHz">
      <xsd:annotation>
        <xsd:documentation>femtohertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="femtohertz" unitsystem="SI.HERTZ" enum="FEMTOHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="aHz">
      <xsd:annotation>
        <xsd:documentation>attohertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="attohertz" unitsystem="SI.HERTZ" enum="ATTOHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="zHz">
      <xsd:annotation>
        <xsd:documentation>zeptohertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="zeptohertz" unitsystem="SI.HERTZ" enum="ZEPTOHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="yHz">
      <xsd:annotation>
        <xsd:documentation>yoctohertz unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="yoctohertz" unitsystem="SI.HERTZ" enum="YOCTOHERTZ"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type Binning
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
Represents the number of pixels that are combined to form larger pixels. {used:CCD,EMCCD}
Diagram
Diagram
Type restriction of xsd:string
Facets
enumeration 1x1
No binning.
enumeration 2x2
2×2 binning.
enumeration 4x4
4×4 binning.
enumeration 8x8
8×8 binning.
enumeration Other
Other binning value.
Used by
Source
<xsd:simpleType name="Binning">
  <xsd:annotation>
    <xsd:documentation>Represents the number of pixels that are combined to form larger pixels. {used:CCD,EMCCD}</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:string">
    <xsd:enumeration value="1x1">
      <xsd:annotation>
        <xsd:documentation>No binning.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="1×1" enum="ONEBYONE" compatregex="^\\s*1.*x.*1\\s*"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="2x2">
      <xsd:annotation>
        <xsd:documentation>2×2 binning.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="2×2" enum="TWOBYTWO" compatregex="^\\s*2.*x.*2\\s*"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="4x4">
      <xsd:annotation>
        <xsd:documentation>4×4 binning.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="4×4" enum="FOURBYFOUR" compatregex="^\\s*4.*x.*4\\s*"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="8x8">
      <xsd:annotation>
        <xsd:documentation>8×8 binning.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="8×8" enum="EIGHTBYEIGHT" compatregex="^\\s*8.*x.*8\\s*"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Other">
      <xsd:annotation>
        <xsd:documentation>Other binning value.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum enum="OTHER"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type ChannelID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Channel:\S+)|(Channel:\S+))
Used by
Source
<xsd:simpleType name="ChannelID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Channel:\S+)|(Channel:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type base64Binary
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram
Type xsd:base64Binary
Used by
Element BinData
Source
<xsd:simpleType name="base64Binary">
  <xsd:restriction base="xsd:base64Binary"/>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type NonNegativeLong
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A simple type that restricts the value to a long between 0 and 9223372036854775807 (inclusive).
Diagram
Diagram
Type restriction of xsd:long
Facets
minInclusive 0
Used by
Source
<xsd:simpleType name="NonNegativeLong">
  <xsd:annotation>
    <xsd:documentation>A simple type that restricts the value to a long between 0 and 9223372036854775807 (inclusive).</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:long">
    <xsd:minInclusive value="0"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type UniversallyUniqueIdentifier
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
This is a unique ID for the file but does not conform to the ID pattern used in the rest of the file.
The rest of the IDs are either an full LSID or an internal ID which is a string that is simply unique in this file.
As the UniversallyUniqueIdentifier is used from outside this file to identify it having the same ID in another file could cause problems.
A UUID is 32 hexadecimal digits, in 5 groups, 8-4-4-4-12, separated by hyphens
e.g. urn:uuid:3e450fae-b8f2-4d35-aa54-702168b2487f
There are methods to generate these in most modern languages.
http://www.ietf.org/rfc/rfc4122.txt
Diagram
Diagram
Type restriction of xsd:anyURI
Facets
pattern (urn:uuid:[0-9a-fA-F]{8}-[0-9a-fA-F]{4}-[0-9a-fA-F]{4}-[0-9a-fA-F]{4}-[0-9a-fA-F]{12})
Used by
Source
<xsd:simpleType name="UniversallyUniqueIdentifier">
  <xsd:annotation>
    <xsd:documentation>This is a unique ID for the file but does not conform to the ID pattern used in the rest of the file. The rest of the IDs are either an full LSID or an internal ID which is a string that is simply unique in this file. As the UniversallyUniqueIdentifier is used from outside this file to identify it having the same ID in another file could cause problems. A UUID is 32 hexadecimal digits, in 5 groups, 8-4-4-4-12, separated by hyphens e.g. urn:uuid:3e450fae-b8f2-4d35-aa54-702168b2487f There are methods to generate these in most modern languages. http://www.ietf.org/rfc/rfc4122.txt</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:anyURI">
    <xsd:pattern value="(urn:uuid:[0-9a-fA-F]{8}-[0-9a-fA-F]{4}-[0-9a-fA-F]{4}-[0-9a-fA-F]{4}-[0-9a-fA-F]{12})"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type Hex40
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
Binary contents coded in hexadecimal (20 characters long)
Diagram
Diagram
Type restriction of xsd:hexBinary
Facets
length 20
Used by
Element Plane/HashSHA1
Attribute External/@SHA1
Source
<xsd:simpleType name="Hex40">
  <xsd:annotation>
    <xsd:documentation>Binary contents coded in hexadecimal (20 characters long)</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:hexBinary">
    <xsd:length value="20"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type UnitsTime
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The units used to represent a time interval
Diagram
Diagram
Type restriction of xsd:string
Facets
enumeration Ys
yottasecond SI unit.
enumeration Zs
zettasecond SI unit.
enumeration Es
exasecond SI unit.
enumeration Ps
petasecond SI unit.
enumeration Ts
terasecond SI unit.
enumeration Gs
gigasecond SI unit.
enumeration Ms
megasecond SI unit.
enumeration ks
kilosecond SI unit.
enumeration hs
hectosecond SI unit.
enumeration das
decasecond SI unit.
enumeration s
second SI unit.
enumeration ds
decisecond SI unit.
enumeration cs
centisecond SI unit.
enumeration ms
millisecond SI unit.
enumeration µs
microsecond SI unit.
enumeration ns
nanosecond SI unit.
enumeration ps
picosecond SI unit.
enumeration fs
femtosecond SI unit.
enumeration as
attosecond SI unit.
enumeration zs
zeptosecond SI unit.
enumeration ys
yoctosecond SI unit.
enumeration min
minute SI-derived unit.
enumeration h
hour SI-derived unit.
enumeration d
day SI-derived unit.
Used by
Source
<xsd:simpleType name="UnitsTime">
  <xsd:annotation>
    <xsd:documentation>The units used to represent a time interval</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:string">
    <xsd:enumeration value="Ys">
      <xsd:annotation>
        <xsd:documentation>yottasecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="yottasecond" plural="yottaseconds" unitsystem="SI.SECOND" enum="YOTTASECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Zs">
      <xsd:annotation>
        <xsd:documentation>zettasecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="zettasecond" plural="zettaseconds" unitsystem="SI.SECOND" enum="ZETTASECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Es">
      <xsd:annotation>
        <xsd:documentation>exasecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="exasecond" plural="exaseconds" unitsystem="SI.SECOND" enum="EXASECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Ps">
      <xsd:annotation>
        <xsd:documentation>petasecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="petasecond" plural="petaseconds" unitsystem="SI.SECOND" enum="PETASECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Ts">
      <xsd:annotation>
        <xsd:documentation>terasecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="terasecond" plural="teraseconds" unitsystem="SI.SECOND" enum="TERASECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Gs">
      <xsd:annotation>
        <xsd:documentation>gigasecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="gigasecond" plural="gigaseconds" unitsystem="SI.SECOND" enum="GIGASECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="Ms">
      <xsd:annotation>
        <xsd:documentation>megasecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="megasecond" plural="megaseconds" unitsystem="SI.SECOND" enum="MEGASECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="ks">
      <xsd:annotation>
        <xsd:documentation>kilosecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="kilosecond" plural="kiloseconds" unitsystem="SI.SECOND" enum="KILOSECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="hs">
      <xsd:annotation>
        <xsd:documentation>hectosecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="hectosecond" plural="hectoseconds" unitsystem="SI.SECOND" enum="HECTOSECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="das">
      <xsd:annotation>
        <xsd:documentation>decasecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="decasecond" plural="decaseconds" unitsystem="SI.SECOND" enum="DECASECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="s">
      <xsd:annotation>
        <xsd:documentation>second SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="second" plural="seconds" unitsystem="SI.SECOND" enum="SECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="ds">
      <xsd:annotation>
        <xsd:documentation>decisecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="decisecond" plural="deciseconds" unitsystem="SI.SECOND" enum="DECISECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="cs">
      <xsd:annotation>
        <xsd:documentation>centisecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="centisecond" plural="centiseconds" unitsystem="SI.SECOND" enum="CENTISECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="ms">
      <xsd:annotation>
        <xsd:documentation>millisecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="millisecond" plural="milliseconds" unitsystem="SI.SECOND" enum="MILLISECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="µs">
      <xsd:annotation>
        <xsd:documentation>microsecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="microsecond" plural="microseconds" unitsystem="SI.SECOND" enum="MICROSECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="ns">
      <xsd:annotation>
        <xsd:documentation>nanosecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="nanosecond" plural="nanoseconds" unitsystem="SI.SECOND" enum="NANOSECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="ps">
      <xsd:annotation>
        <xsd:documentation>picosecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="picosecond" plural="picoseconds" unitsystem="SI.SECOND" enum="PICOSECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="fs">
      <xsd:annotation>
        <xsd:documentation>femtosecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="femtosecond" plural="femtoseconds" unitsystem="SI.SECOND" enum="FEMTOSECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="as">
      <xsd:annotation>
        <xsd:documentation>attosecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="attosecond" plural="attoseconds" unitsystem="SI.SECOND" enum="ATTOSECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="zs">
      <xsd:annotation>
        <xsd:documentation>zeptosecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="zeptosecond" plural="zeptoseconds" unitsystem="SI.SECOND" enum="ZEPTOSECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="ys">
      <xsd:annotation>
        <xsd:documentation>yoctosecond SI unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="yoctosecond" plural="yoctoseconds" unitsystem="SI.SECOND" enum="YOCTOSECOND"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="min">
      <xsd:annotation>
        <xsd:documentation>minute SI-derived unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="minute" plural="minutes" unitsystem="SI.SECOND" enum="MINUTE"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="h">
      <xsd:annotation>
        <xsd:documentation>hour SI-derived unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="hour" plural="hours" unitsystem="SI.SECOND" enum="HOUR"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="d">
      <xsd:annotation>
        <xsd:documentation>day SI-derived unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="day" plural="days" unitsystem="SI.SECOND" enum="DAY"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type PixelsID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Pixels:\S+)|(Pixels:\S+))
Used by
Attribute Pixels/@ID
Source
<xsd:simpleType name="PixelsID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Pixels:\S+)|(Pixels:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type PixelType
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The number size/kind used to represent a pixel
Diagram
Diagram
Type restriction of xsd:string
Facets
enumeration int8
8 bit signed integer.
enumeration int16
16 bit signed integer.
enumeration int32
32 bit signed integer.
enumeration uint8
8 bit unsigned integer.
enumeration uint16
16 bit unsigned integer.
enumeration uint32
32 bit unsigned integer.
enumeration float
single-precision floating point.
enumeration double
double-precision floating point.
enumeration complex
complex single-precision floating point.
enumeration double-complex
complex double-precision floating point.
enumeration bit
bit mask.
Used by
Attribute Pixels/@Type
Source
<xsd:simpleType name="PixelType">
  <xsd:annotation>
    <xsd:documentation>The number size/kind used to represent a pixel</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:string">
    <xsd:enumeration value="int8">
      <xsd:annotation>
        <xsd:documentation>8 bit signed integer.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum enum="INT8"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="int16">
      <xsd:annotation>
        <xsd:documentation>16 bit signed integer.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum enum="INT16"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="int32">
      <xsd:annotation>
        <xsd:documentation>32 bit signed integer.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum enum="INT32"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="uint8">
      <xsd:annotation>
        <xsd:documentation>8 bit unsigned integer.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum enum="UINT8"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="uint16">
      <xsd:annotation>
        <xsd:documentation>16 bit unsigned integer.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum enum="UINT16"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="uint32">
      <xsd:annotation>
        <xsd:documentation>32 bit unsigned integer.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum enum="UINT32"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="float">
      <xsd:annotation>
        <xsd:documentation>single-precision floating point.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum enum="FLOAT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="double">
      <xsd:annotation>
        <xsd:documentation>double-precision floating point.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum enum="DOUBLE"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="complex">
      <xsd:annotation>
        <xsd:documentation>complex single-precision floating point.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum enum="COMPLEXFLOAT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="double-complex">
      <xsd:annotation>
        <xsd:documentation>complex double-precision floating point.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum enum="COMPLEXDOUBLE"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="bit">
      <xsd:annotation>
        <xsd:documentation>bit mask.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum enum="BIT"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Complex Type TextAnnotation
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
An abstract Text Annotation from which some others are derived.
Diagram
Diagram ome_xsd.tmp#Annotation_ID ome_xsd.tmp#Annotation_Namespace ome_xsd.tmp#Annotation_Annotator ome_xsd.tmp#Annotation_Description ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Annotation
Type extension of Annotation
Type hierarchy
Used by
Model
Children AnnotationRef, Description
Attributes
QName Type Use Annotation
Annotator ExperimenterID optional
The Annotator is the person who attached this annotation.
e.g. If UserA annotates something with TagB, owned by UserB,
UserA is still the Annotator.
ID AnnotationID required
Namespace xsd:anyURI optional
We recommend the inclusion of a namespace for annotations you
define. If it is absent then we assume the annotation is to
use our (OME's) default interpretation for this type.
Source
<xsd:complexType name="TextAnnotation">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>TextAnnotations</plural>
        <abstract/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>An abstract Text Annotation from which some others are derived.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexContent>
    <xsd:extension base="Annotation"/>
  </xsd:complexContent>
</xsd:complexType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Complex Type Annotation
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
An annotation from which all others are ultimately derived.
Diagram
Diagram ome_xsd.tmp#Annotation_ID ome_xsd.tmp#Annotation_Namespace ome_xsd.tmp#Annotation_Annotator ome_xsd.tmp#Annotation_Description ome_xsd.tmp#AnnotationRef
Used by
Model
Children AnnotationRef, Description
Attributes
QName Type Use Annotation
Annotator ExperimenterID optional
The Annotator is the person who attached this annotation.
e.g. If UserA annotates something with TagB, owned by UserB,
UserA is still the Annotator.
ID AnnotationID required
Namespace xsd:anyURI optional
We recommend the inclusion of a namespace for annotations you
define. If it is absent then we assume the annotation is to
use our (OME's) default interpretation for this type.
Source
<xsd:complexType name="Annotation">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Annotations</plural>
        <abstract/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>An annotation from which all others are ultimately derived.</xsd:documentation>
  </xsd:annotation>
  <xsd:sequence>
    <xsd:element name="Description" minOccurs="0" maxOccurs="1">
      <xsd:annotation>
        <xsd:documentation>A description for the annotation. [plain-text multi-line string]</xsd:documentation>
      </xsd:annotation>
      <xsd:simpleType>
        <xsd:restriction base="xsd:string">
          <xsd:whiteSpace value="preserve"/>
        </xsd:restriction>
      </xsd:simpleType>
    </xsd:element>
    <xsd:sequence>
      <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
        <xsd:annotation>
          <xsd:appinfo>
            <xsdfu xmlns="">
              <manytomany/>
            </xsdfu>
          </xsd:appinfo>
        </xsd:annotation>
      </xsd:element>
    </xsd:sequence>
  </xsd:sequence>
  <xsd:attribute name="ID" use="required" type="AnnotationID"/>
  <xsd:attribute name="Namespace" use="optional" type="xsd:anyURI">
    <xsd:annotation>
      <xsd:documentation>We recommend the inclusion of a namespace for annotations you define. If it is absent then we assume the annotation is to use our (OME's) default interpretation for this type.</xsd:documentation>
    </xsd:annotation>
  </xsd:attribute>
  <xsd:attribute name="Annotator" use="optional" type="ExperimenterID">
    <xsd:annotation>
      <xsd:documentation>The Annotator is the person who attached this annotation. e.g. If UserA annotates something with TagB, owned by UserB, UserA is still the Annotator.</xsd:documentation>
    </xsd:annotation>
  </xsd:attribute>
</xsd:complexType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Complex Type TypeAnnotation
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
An abstract Type Annotation from which some others are derived.
Diagram
Diagram ome_xsd.tmp#Annotation_ID ome_xsd.tmp#Annotation_Namespace ome_xsd.tmp#Annotation_Annotator ome_xsd.tmp#Annotation_Description ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Annotation
Type extension of Annotation
Type hierarchy
Used by
Element FileAnnotation
Model
Children AnnotationRef, Description
Attributes
QName Type Use Annotation
Annotator ExperimenterID optional
The Annotator is the person who attached this annotation.
e.g. If UserA annotates something with TagB, owned by UserB,
UserA is still the Annotator.
ID AnnotationID required
Namespace xsd:anyURI optional
We recommend the inclusion of a namespace for annotations you
define. If it is absent then we assume the annotation is to
use our (OME's) default interpretation for this type.
Source
<xsd:complexType name="TypeAnnotation">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>TypeAnnotations</plural>
        <abstract/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>An abstract Type Annotation from which some others are derived.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexContent>
    <xsd:extension base="Annotation"/>
  </xsd:complexContent>
</xsd:complexType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Complex Type NumericAnnotation
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
An abstract Numeric Annotation from which some others are derived.
Diagram
Diagram ome_xsd.tmp#Annotation_ID ome_xsd.tmp#Annotation_Namespace ome_xsd.tmp#Annotation_Annotator ome_xsd.tmp#Annotation_Description ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Annotation ome_xsd.tmp#BasicAnnotation
Type extension of BasicAnnotation
Type hierarchy
Used by
Model
Children AnnotationRef, Description
Attributes
QName Type Use Annotation
Annotator ExperimenterID optional
The Annotator is the person who attached this annotation.
e.g. If UserA annotates something with TagB, owned by UserB,
UserA is still the Annotator.
ID AnnotationID required
Namespace xsd:anyURI optional
We recommend the inclusion of a namespace for annotations you
define. If it is absent then we assume the annotation is to
use our (OME's) default interpretation for this type.
Source
<xsd:complexType name="NumericAnnotation">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>NumericAnnotations</plural>
        <abstract/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>An abstract Numeric Annotation from which some others are derived.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexContent>
    <xsd:extension base="BasicAnnotation"/>
  </xsd:complexContent>
</xsd:complexType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Complex Type BasicAnnotation
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
An abstract Basic Annotation from which some others are derived.
Diagram
Diagram ome_xsd.tmp#Annotation_ID ome_xsd.tmp#Annotation_Namespace ome_xsd.tmp#Annotation_Annotator ome_xsd.tmp#Annotation_Description ome_xsd.tmp#AnnotationRef ome_xsd.tmp#Annotation
Type extension of Annotation
Type hierarchy
Used by
Model
Children AnnotationRef, Description
Attributes
QName Type Use Annotation
Annotator ExperimenterID optional
The Annotator is the person who attached this annotation.
e.g. If UserA annotates something with TagB, owned by UserB,
UserA is still the Annotator.
ID AnnotationID required
Namespace xsd:anyURI optional
We recommend the inclusion of a namespace for annotations you
define. If it is absent then we assume the annotation is to
use our (OME's) default interpretation for this type.
Source
<xsd:complexType name="BasicAnnotation">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>BasicAnnotations</plural>
        <abstract/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>An abstract Basic Annotation from which some others are derived.</xsd:documentation>
  </xsd:annotation>
  <xsd:complexContent>
    <xsd:extension base="Annotation"/>
  </xsd:complexContent>
</xsd:complexType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Complex Type Shape
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The shape element contains a single specific ROI shape and links
that to any channels, and a timepoint and a z-section. It also
records any transform applied to the ROI shape.
Diagram
Diagram ome_xsd.tmp#Shape_FillColor ome_xsd.tmp#Shape_FillRule ome_xsd.tmp#Shape_StrokeColor ome_xsd.tmp#Shape_StrokeWidth ome_xsd.tmp#Shape_StrokeWidthUnit ome_xsd.tmp#Shape_StrokeDashArray ome_xsd.tmp#Shape_Text ome_xsd.tmp#Shape_FontFamily ome_xsd.tmp#Shape_FontSize ome_xsd.tmp#Shape_FontSizeUnit ome_xsd.tmp#Shape_FontStyle ome_xsd.tmp#Shape_Locked ome_xsd.tmp#Shape_ID ome_xsd.tmp#Shape_TheZ ome_xsd.tmp#Shape_TheT ome_xsd.tmp#Shape_TheC ome_xsd.tmp#Shape_Transform ome_xsd.tmp#AnnotationRef
Used by
Model
Children AnnotationRef, Transform
Attributes
QName Type Default Use Annotation
FillColor Color optional
The color of the fill - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
FillRule restriction of xsd:string optional
FontFamily restriction of xsd:string optional
FontSize NonNegativeInt optional
Size of the font. Units are set by FontSizeUnit.
FontSizeUnit UnitsLength pt optional
The units used for the font size.
FontStyle restriction of xsd:string optional
ID ShapeID required
Locked xsd:boolean optional
Controls whether the shape is locked and read only,
true is locked, false is editable.
StrokeColor Color optional
The color of the stroke  - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
StrokeDashArray xsd:string optional
e.g. "none", "10 20 30 10"
StrokeWidth xsd:float optional
The width of the stroke. Units are set by StrokeWidthUnit.
StrokeWidthUnit UnitsLength pixel optional
The units used for the stroke width.
Text xsd:string optional
TheC NonNegativeInt optional
The channel the ROI applies to. If not specified then
the ROI applies to all the channels of the image. [units:none]
This is numbered from 0.
TheT NonNegativeInt optional
The timepoint the ROI applies to. If not specified then
the ROI applies to all the timepoints of the image. [units:none]
This is numbered from 0.
TheZ NonNegativeInt optional
The z-section the ROI applies to. If not specified then
the ROI applies to all the z-sections of the image. [units:none]
This is numbered from 0.
Source
<xsd:complexType name="Shape">
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Shapes</plural>
        <abstract/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>The shape element contains a single specific ROI shape and links that to any channels, and a timepoint and a z-section. It also records any transform applied to the ROI shape.</xsd:documentation>
  </xsd:annotation>
  <xsd:sequence>
    <xsd:element name="Transform" type="AffineTransform" minOccurs="0" maxOccurs="1">
      <xsd:annotation>
        <xsd:documentation>This is a matrix used to transform the shape. The element has 6 xsd:float attributes. If the element is present then all 6 values must be included.</xsd:documentation>
      </xsd:annotation>
    </xsd:element>
    <xsd:element ref="AnnotationRef" minOccurs="0" maxOccurs="unbounded">
      <xsd:annotation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <manytomany/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:element>
  </xsd:sequence>
  <xsd:attribute name="FillColor" use="optional" type="Color">
    <xsd:annotation>
      <xsd:documentation>The color of the fill - encoded as RGBA The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value) NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.</xsd:documentation>
    </xsd:annotation>
  </xsd:attribute>
  <xsd:attribute name="FillRule" use="optional">
    <xsd:simpleType>
      <xsd:annotation>
        <xsd:documentation>The rule used to decide which parts of the shape to fill. [enumeration]</xsd:documentation>
      </xsd:annotation>
      <xsd:restriction base="xsd:string">
        <xsd:enumeration value="EvenOdd"/>
        <xsd:enumeration value="NonZero"/>
      </xsd:restriction>
    </xsd:simpleType>
  </xsd:attribute>
  <xsd:attribute name="StrokeColor" use="optional" type="Color">
    <xsd:annotation>
      <xsd:documentation>The color of the stroke - encoded as RGBA The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value) NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.</xsd:documentation>
    </xsd:annotation>
  </xsd:attribute>
  <xsd:attribute name="StrokeWidth" use="optional" type="xsd:float">
    <xsd:annotation>
      <xsd:documentation>The width of the stroke. Units are set by StrokeWidthUnit.</xsd:documentation>
    </xsd:annotation>
  </xsd:attribute>
  <xsd:attribute name="StrokeWidthUnit" use="optional" default="pixel" type="UnitsLength">
    <xsd:annotation>
      <xsd:documentation>The units used for the stroke width.</xsd:documentation>
    </xsd:annotation>
  </xsd:attribute>
  <xsd:attribute name="StrokeDashArray" use="optional" type="xsd:string">
    <xsd:annotation>
      <xsd:documentation>e.g. "none", "10 20 30 10"</xsd:documentation>
    </xsd:annotation>
  </xsd:attribute>
  <xsd:attribute name="Text" use="optional" type="xsd:string"/>
  <xsd:attribute name="FontFamily" use="optional">
    <xsd:simpleType>
      <xsd:annotation>
        <xsd:documentation>The font family used to draw the text. [enumeration] Note: these values are all lower case so they match the standard HTML/CSS values. "fantasy" has been included for completeness; we do not recommend its regular use. This attribute is under consideration for removal from the OME-XML schema.</xsd:documentation>
      </xsd:annotation>
      <xsd:restriction base="xsd:string">
        <xsd:enumeration value="serif"/>
        <xsd:enumeration value="sans-serif"/>
        <xsd:enumeration value="cursive"/>
        <xsd:enumeration value="fantasy"/>
        <xsd:enumeration value="monospace"/>
      </xsd:restriction>
    </xsd:simpleType>
  </xsd:attribute>
  <xsd:attribute name="FontSize" use="optional" type="NonNegativeInt">
    <xsd:annotation>
      <xsd:documentation>Size of the font. Units are set by FontSizeUnit.</xsd:documentation>
    </xsd:annotation>
  </xsd:attribute>
  <xsd:attribute name="FontSizeUnit" use="optional" default="pt" type="UnitsLength">
    <xsd:annotation>
      <xsd:documentation>The units used for the font size.</xsd:documentation>
    </xsd:annotation>
  </xsd:attribute>
  <xsd:attribute name="FontStyle" use="optional">
    <xsd:simpleType>
      <xsd:annotation>
        <xsd:documentation>The style and weight applied to the text. [enumeration] This is a simplified combination of the HTML/CSS attributes font-style AND font-weight.</xsd:documentation>
      </xsd:annotation>
      <xsd:restriction base="xsd:string">
        <xsd:enumeration value="Bold"/>
        <xsd:enumeration value="BoldItalic"/>
        <xsd:enumeration value="Italic"/>
        <xsd:enumeration value="Normal"/>
      </xsd:restriction>
    </xsd:simpleType>
  </xsd:attribute>
  <xsd:attribute name="Locked" use="optional" type="xsd:boolean">
    <xsd:annotation>
      <xsd:documentation>Controls whether the shape is locked and read only, true is locked, false is editable.</xsd:documentation>
    </xsd:annotation>
  </xsd:attribute>
  <xsd:attribute name="ID" use="required" type="ShapeID"/>
  <xsd:attribute name="TheZ" use="optional" type="NonNegativeInt">
    <xsd:annotation>
      <xsd:documentation>The z-section the ROI applies to. If not specified then the ROI applies to all the z-sections of the image. [units:none] This is numbered from 0.</xsd:documentation>
    </xsd:annotation>
  </xsd:attribute>
  <xsd:attribute name="TheT" use="optional" type="NonNegativeInt">
    <xsd:annotation>
      <xsd:documentation>The timepoint the ROI applies to. If not specified then the ROI applies to all the timepoints of the image. [units:none] This is numbered from 0.</xsd:documentation>
    </xsd:annotation>
  </xsd:attribute>
  <xsd:attribute name="TheC" use="optional" type="NonNegativeInt">
    <xsd:annotation>
      <xsd:documentation>The channel the ROI applies to. If not specified then the ROI applies to all the channels of the image. [units:none] This is numbered from 0.</xsd:documentation>
    </xsd:annotation>
  </xsd:attribute>
</xsd:complexType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Complex Type AffineTransform
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
A matrix used to transform the shape.
⎡ A00, A01, A02 ⎤
⎢ A10, A11, A12 ⎥
⎣ 0,   0,   1   ⎦
Diagram
Diagram ome_xsd.tmp#AffineTransform_A00 ome_xsd.tmp#AffineTransform_A10 ome_xsd.tmp#AffineTransform_A01 ome_xsd.tmp#AffineTransform_A11 ome_xsd.tmp#AffineTransform_A02 ome_xsd.tmp#AffineTransform_A12
Used by
Element Shape/Transform
Attributes
QName Type Use
A00 xsd:float required
A01 xsd:float required
A02 xsd:float required
A10 xsd:float required
A11 xsd:float required
A12 xsd:float required
Source
<xsd:complexType name="AffineTransform">
  <xsd:annotation>
    <xsd:documentation>A matrix used to transform the shape. ⎡ A00, A01, A02 ⎤ ⎢ A10, A11, A12 ⎥ ⎣ 0, 0, 1 ⎦</xsd:documentation>
  </xsd:annotation>
  <xsd:attribute name="A00" use="required" type="xsd:float"/>
  <xsd:attribute name="A10" use="required" type="xsd:float"/>
  <xsd:attribute name="A01" use="required" type="xsd:float"/>
  <xsd:attribute name="A11" use="required" type="xsd:float"/>
  <xsd:attribute name="A02" use="required" type="xsd:float"/>
  <xsd:attribute name="A12" use="required" type="xsd:float"/>
</xsd:complexType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type ShapeID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Shape:\S+)|(Shape:\S+))
Used by
Attribute Shape/@ID
Source
<xsd:simpleType name="ShapeID">
  <!-- top level definition -->
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Shape:\S+)|(Shape:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type FontFamily
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The font family used to draw the text. [enumeration]
Note: these values are all lower case so they match
the standard HTML/CSS values. "fantasy" has been
included for completeness we do not recommended its
regular use.
Diagram
Diagram
Type restriction of xsd:string
Facets
enumeration serif
serif.
enumeration sans-serif
sans-serif.
enumeration cursive
cursive.
enumeration fantasy
fantasy.
enumeration monospace
monospace.
Source
<xsd:simpleType name="FontFamily">
  <xsd:annotation>
    <xsd:documentation>The font family used to draw the text. [enumeration] Note: these values are all lower case so they match the standard HTML/CSS values. "fantasy" has been included for completeness we do not recommended its regular use.</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:string">
    <xsd:enumeration value="serif">
      <xsd:annotation>
        <xsd:documentation>serif.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum enum="SERIF"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="sans-serif">
      <xsd:annotation>
        <xsd:documentation>sans-serif.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum enum="SANSSERIF"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="cursive">
      <xsd:annotation>
        <xsd:documentation>cursive.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum enum="CURSIVE"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="fantasy">
      <xsd:annotation>
        <xsd:documentation>fantasy.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum enum="FANTASY"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="monospace">
      <xsd:annotation>
        <xsd:documentation>monospace.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum enum="MONOSPACE"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type UnitsAngle
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
The units used to represent an angle
Diagram
Diagram
Type restriction of xsd:string
Facets
enumeration deg
degree unit.
enumeration rad
radian unit.
enumeration gon
gradian unit.
Source
<xsd:simpleType name="UnitsAngle">
  <xsd:annotation>
    <xsd:documentation>The units used to represent an angle</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:string">
    <xsd:enumeration value="deg">
      <xsd:annotation>
        <xsd:documentation>degree unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="degree" plural="degrees" unitsystem="SI.RADIAN" enum="DEGREE"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="rad">
      <xsd:annotation>
        <xsd:documentation>radian unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="radian" plural="radians" unitsystem="SI.RADIAN" enum="RADIAN"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
    <xsd:enumeration value="gon">
      <xsd:annotation>
        <xsd:documentation>gradian unit.</xsd:documentation>
        <xsd:appinfo>
          <xsdfu xmlns="">
            <enum name="gradian" plural="gradians" unitsystem="SI.RADIAN" enum="GRADIAN"/>
          </xsdfu>
        </xsd:appinfo>
      </xsd:annotation>
    </xsd:enumeration>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type ModuleID
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Diagram
Diagram ome_xsd.tmp#LSID
Type restriction of LSID
Type hierarchy
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Module:\S+)|(Module:\S+))
Source
<xsd:simpleType name="ModuleID">
  <xsd:restriction base="LSID">
    <xsd:pattern value="(urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Module:\S+)|(Module:\S+)"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Simple Type Marker
Namespace http://www.openmicroscopy.org/Schemas/OME/2016-06
Annotations
Shape of marker on the end of a line. [enumeration]
Diagram
Diagram
Type restriction of xsd:string
Facets
enumeration Arrow
Used by
Source
<xsd:simpleType name="Marker">
  <!-- top level definition -->
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <plural>Markers</plural>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>Shape of marker on the end of a line. [enumeration]</xsd:documentation>
  </xsd:annotation>
  <xsd:restriction base="xsd:string">
    <xsd:enumeration value="Arrow"/>
  </xsd:restriction>
</xsd:simpleType>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ExperimenterRef / @ID
Namespace No namespace
Type ExperimenterID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Experimenter:\S+)|(Experimenter:\S+))
Used by
Element ExperimenterRef
Source
<xsd:attribute name="ID" use="required" type="ExperimenterID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ExperimenterGroupRef / @ID
Namespace No namespace
Type ExperimenterGroupID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:ExperimenterGroup:\S+)|(ExperimenterGroup:\S+))
Used by
Source
<xsd:attribute name="ID" use="required" type="ExperimenterGroupID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute DatasetRef / @ID
Namespace No namespace
Type DatasetID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Dataset:\S+)|(Dataset:\S+))
Used by
Element DatasetRef
Source
<xsd:attribute name="ID" use="required" type="DatasetID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute AnnotationRef / @ID
Namespace No namespace
Type AnnotationID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Annotation:\S+)|(Annotation:\S+))
Used by
Element AnnotationRef
Source
<xsd:attribute name="ID" use="required" type="AnnotationID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Project / @Name
Namespace No namespace
Type xsd:string
Properties
use optional
Used by
Element Project
Source
<xsd:attribute name="Name" use="optional" type="xsd:string"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Project / @ID
Namespace No namespace
Type ProjectID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Project:\S+)|(Project:\S+))
Used by
Element Project
Source
<xsd:attribute name="ID" use="required" type="ProjectID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ImageRef / @ID
Namespace No namespace
Type ImageID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Image:\S+)|(Image:\S+))
Used by
Element ImageRef
Source
<xsd:attribute name="ID" use="required" type="ImageID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Dataset / @Name
Namespace No namespace
Annotations
A name for the dataset that is suitable for presentation to the user.
Type xsd:string
Properties
use optional
Used by
Element Dataset
Source
<xsd:attribute name="Name" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>A name for the dataset that is suitable for presentation to the user.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Dataset / @ID
Namespace No namespace
Type DatasetID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Dataset:\S+)|(Dataset:\S+))
Used by
Element Dataset
Source
<xsd:attribute name="ID" use="required" type="DatasetID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute FolderRef / @ID
Namespace No namespace
Type FolderID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Folder:\S+)|(Folder:\S+))
Used by
Element FolderRef
Source
<xsd:attribute name="ID" use="required" type="FolderID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ROIRef / @ID
Namespace No namespace
Type ROIID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+)|(\S+))
Used by
Element ROIRef
Source
<xsd:attribute name="ID" use="required" type="ROIID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Folder / @ID
Namespace No namespace
Type FolderID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Folder:\S+)|(Folder:\S+))
Used by
Element Folder
Source
<xsd:attribute name="ID" use="required" type="FolderID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Folder / @Name
Namespace No namespace
Annotations
A name for the folder that is suitable for presentation to the user.
Type xsd:string
Properties
use optional
Used by
Element Folder
Source
<xsd:attribute name="Name" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>A name for the folder that is suitable for presentation to the user.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute LightSourceSettings / @ID
Namespace No namespace
Type LightSourceID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:LightSource:\S+)|(LightSource:\S+))
Used by
Source
<xsd:attribute name="ID" use="required" type="LightSourceID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute LightSourceSettings / @Attenuation
Namespace No namespace
Annotations
The Attenuation of the light source [units:none]
A fraction, as a value from 0.0 to 1.0.
Type PercentFraction
Properties
use optional
Facets
maxInclusive 1.0
minInclusive 0.0
Used by
Source
<xsd:attribute name="Attenuation" use="optional" type="PercentFraction">
  <xsd:annotation>
    <xsd:documentation>The Attenuation of the light source [units:none] A fraction, as a value from 0.0 to 1.0.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute LightSourceSettings / @Wavelength
Namespace No namespace
Annotations
The Wavelength of the light source. Units are set by WavelengthUnit.
Type PositiveFloat
Properties
use optional
Facets
minExclusive 0.0
Used by
Source
<xsd:attribute name="Wavelength" use="optional" type="PositiveFloat">
  <xsd:annotation>
    <xsd:documentation>The Wavelength of the light source. Units are set by WavelengthUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute LightSourceSettings / @WavelengthUnit
Namespace No namespace
Annotations
The units of the Wavelength of the light source - default:nanometres[nm]
Type UnitsLength
Properties
use optional
default nm
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Source
<xsd:attribute name="WavelengthUnit" use="optional" default="nm" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the Wavelength of the light source - default:nanometres[nm]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute MicrobeamManipulation / @ID
Namespace No namespace
Type MicrobeamManipulationID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:MicrobeamManipulation:\S+)|(MicrobeamManipulation:\S+))
Used by
Source
<xsd:attribute name="ID" use="required" type="MicrobeamManipulationID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute MicrobeamManipulation / @Type
Namespace No namespace
Annotations
The type of manipulation performed.
Type list of restriction of xsd:string
Properties
use optional
Used by
Source
<xsd:attribute name="Type" use="optional">
  <xsd:annotation>
    <xsd:documentation>The type of manipulation performed.</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:list>
      <xsd:simpleType>
        <xsd:restriction base="xsd:string">
          <xsd:enumeration value="FRAP"/>
          <!-- Fluorescence recovery after photobleaching -->
          <xsd:enumeration value="FLIP"/>
          <!-- Fluorescence Loss in Photobleaching -->
          <xsd:enumeration value="InverseFRAP"/>
          <!-- iFRAP, inverse FRAP -->
          <xsd:enumeration value="Photoablation"/>
          <xsd:enumeration value="Photoactivation"/>
          <xsd:enumeration value="Uncaging"/>
          <xsd:enumeration value="OpticalTrapping"/>
          <xsd:enumeration value="Other"/>
        </xsd:restriction>
      </xsd:simpleType>
    </xsd:list>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Experiment / @Type
Namespace No namespace
Annotations
A term to describe the type of experiment.
Type list of restriction of xsd:string
Properties
use optional
Used by
Element Experiment
Source
<xsd:attribute name="Type" use="optional">
  <xsd:annotation>
    <xsd:documentation>A term to describe the type of experiment.</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:list>
      <xsd:simpleType>
        <xsd:restriction base="xsd:string">
          <xsd:enumeration value="FP"/>
          <xsd:enumeration value="FRET"/>
          <!-- Förster resonance energy transfer, also known as fluorescence resonance energy transfer, resonance energy transfer (RET) or electronic energy transfer (EET) -->
          <xsd:enumeration value="TimeLapse"/>
          <!--  Time-lapse microscopy (microphotography, photomicrography) -->
          <xsd:enumeration value="FourDPlus"/>
          <xsd:enumeration value="Screen"/>
          <xsd:enumeration value="Immunocytochemistry"/>
          <xsd:enumeration value="Immunofluorescence"/>
          <xsd:enumeration value="FISH"/>
          <!-- Fluorescent in situ hybridization -->
          <xsd:enumeration value="Electrophysiology"/>
          <xsd:enumeration value="IonImaging"/>
          <xsd:enumeration value="Colocalization"/>
          <xsd:enumeration value="PGIDocumentation"/>
          <xsd:enumeration value="FluorescenceLifetime"/>
          <!-- Fluorescence lifetime imaging (FLIM) -->
          <xsd:enumeration value="SpectralImaging"/>
          <xsd:enumeration value="Photobleaching"/>
          <xsd:enumeration value="SPIM"/>
          <!-- Selective or Single Plane Illumination Microscopy -->
          <xsd:enumeration value="Other"/>
        </xsd:restriction>
      </xsd:simpleType>
    </xsd:list>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Experiment / @ID
Namespace No namespace
Type ExperimentID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Experiment:\S+)|(Experiment:\S+))
Used by
Element Experiment
Source
<xsd:attribute name="ID" use="required" type="ExperimentID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute WellSample / @ID
Namespace No namespace
Type WellSampleID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:WellSample:\S+)|(WellSample:\S+))
Used by
Element WellSample
Source
<xsd:attribute name="ID" use="required" type="WellSampleID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute WellSample / @PositionX
Namespace No namespace
Annotations
The X position of the field (image) within the well relative to
the well origin defined on the Plate. Units are set by PositionXUnit.
Type xsd:float
Properties
use optional
Used by
Element WellSample
Source
<xsd:attribute name="PositionX" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The X position of the field (image) within the well relative to the well origin defined on the Plate. Units are set by PositionXUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute WellSample / @PositionXUnit
Namespace No namespace
Annotations
The units of the position in X - default:reference frame.
Type UnitsLength
Properties
use optional
default reference frame
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element WellSample
Source
<xsd:attribute name="PositionXUnit" use="optional" default="reference frame" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the position in X - default:reference frame.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute WellSample / @PositionY
Namespace No namespace
Annotations
The Y position of the field (image) within the well relative to
the well origin defined on the Plate. Units are set by PositionYUnit.
Type xsd:float
Properties
use optional
Used by
Element WellSample
Source
<xsd:attribute name="PositionY" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Y position of the field (image) within the well relative to the well origin defined on the Plate. Units are set by PositionYUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute WellSample / @PositionYUnit
Namespace No namespace
Annotations
The units of the position in Y - default:reference frame.
Type UnitsLength
Properties
use optional
default reference frame
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element WellSample
Source
<xsd:attribute name="PositionYUnit" use="optional" default="reference frame" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the position in Y - default:reference frame.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute WellSample / @Timepoint
Namespace No namespace
Annotations
The time-point at which the image started to be collected
Type xsd:dateTime
Properties
use optional
Used by
Element WellSample
Source
<xsd:attribute name="Timepoint" use="optional" type="xsd:dateTime">
  <xsd:annotation>
    <xsd:documentation>The time-point at which the image started to be collected</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute WellSample / @Index
Namespace No namespace
Annotations
This records the order of the well samples. Each
index should be unique for a given plate but they do not
have to be sequential, there may be gaps if part of the
dataset is missing. In the user interface the displayed
value of the index will be calculated modulo the number
of PlateAcquisitions for the plate.
Type NonNegativeInt
Properties
use required
Facets
minInclusive 0
Used by
Element WellSample
Source
<xsd:attribute name="Index" use="required" type="NonNegativeInt">
  <xsd:annotation>
    <xsd:documentation>This records the order of the well samples. Each index should be unique for a given plate but they do not have to be sequential, there may be gaps if part of the dataset is missing. In the user interface the displayed value of the index will be calculated modulo the number of PlateAcquisitions for the plate.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ReagentRef / @ID
Namespace No namespace
Type ReagentID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Reagent:\S+)|(Reagent:\S+))
Used by
Element ReagentRef
Source
<xsd:attribute name="ID" use="required" type="ReagentID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Well / @ID
Namespace No namespace
Type WellID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Well:\S+)|(Well:\S+))
Used by
Element Well
Source
<xsd:attribute name="ID" use="required" type="WellID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Well / @Column
Namespace No namespace
Annotations
This is the column index of the well, the origin is the top left corner of the plate
with the first column of cells being column zero. i.e top left is (0,0)
The combination of Row, Column has to be unique for each well in a plate.
Type NonNegativeInt
Properties
use required
Facets
minInclusive 0
Used by
Element Well
Source
<xsd:attribute name="Column" use="required" type="NonNegativeInt">
  <xsd:annotation>
    <xsd:documentation>This is the column index of the well, the origin is the top left corner of the plate with the first column of cells being column zero. i.e top left is (0,0) The combination of Row, Column has to be unique for each well in a plate.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Well / @Row
Namespace No namespace
Annotations
This is the row index of the well, the origin is the top left corner of the plate
with the first row of wells being row zero. i.e top left is (0,0)
The combination of Row, Column has to be unique for each well in a plate.
Type NonNegativeInt
Properties
use required
Facets
minInclusive 0
Used by
Element Well
Source
<xsd:attribute name="Row" use="required" type="NonNegativeInt">
  <xsd:annotation>
    <xsd:documentation>This is the row index of the well, the origin is the top left corner of the plate with the first row of wells being row zero. i.e top left is (0,0) The combination of Row, Column has to be unique for each well in a plate.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Well / @ExternalDescription
Namespace No namespace
Annotations
A description of the externally defined identifier for this plate.
Type xsd:string
Properties
use optional
Used by
Element Well
Source
<xsd:attribute name="ExternalDescription" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>A description of the externally defined identifier for this plate.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Well / @ExternalIdentifier
Namespace No namespace
Annotations
The ExternalIdentifier attribute may contain a reference to an external database.
Type xsd:string
Properties
use optional
Used by
Element Well
Source
<xsd:attribute name="ExternalIdentifier" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>The ExternalIdentifier attribute may contain a reference to an external database.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Well / @Type
Namespace No namespace
Annotations
A human readable identifier for the screening status.
e.g. empty, positive control, negative control, control, experimental, etc.
Type xsd:string
Properties
use optional
Used by
Element Well
Source
<xsd:attribute name="Type" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>A human readable identifier for the screening status. e.g. empty, positive control, negative control, control, experimental, etc.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Well / @Color
Namespace No namespace
Annotations
A marker color used to highlight the well - encoded as RGBA
The default value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
Type Color
Properties
use optional
default -1
Used by
Element Well
Source
<xsd:attribute name="Color" use="optional" type="Color" default="-1">
  <xsd:annotation>
    <xsd:documentation>A marker color used to highlight the well - encoded as RGBA The default value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value) NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute WellSampleRef / @ID
Namespace No namespace
Type WellSampleID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:WellSample:\S+)|(WellSample:\S+))
Used by
Element WellSampleRef
Source
<xsd:attribute name="ID" use="required" type="WellSampleID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute PlateAcquisition / @ID
Namespace No namespace
Type PlateAcquisitionID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:PlateAcquisition:\S+)|(PlateAcquisition:\S+))
Used by
Source
<xsd:attribute name="ID" use="required" type="PlateAcquisitionID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute PlateAcquisition / @Name
Namespace No namespace
Type xsd:string
Properties
use optional
Used by
Source
<xsd:attribute name="Name" use="optional" type="xsd:string"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute PlateAcquisition / @EndTime
Namespace No namespace
Annotations
Time when the last image of this acquisition was collected
Type xsd:dateTime
Properties
use optional
Used by
Source
<xsd:attribute name="EndTime" use="optional" type="xsd:dateTime">
  <xsd:annotation>
    <xsd:documentation>Time when the last image of this acquisition was collected</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute PlateAcquisition / @StartTime
Namespace No namespace
Annotations
Time when the first image of this acquisition was collected
Type xsd:dateTime
Properties
use optional
Used by
Source
<xsd:attribute name="StartTime" use="optional" type="xsd:dateTime">
  <xsd:annotation>
    <xsd:documentation>Time when the first image of this acquisition was collected</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute PlateAcquisition / @MaximumFieldCount
Namespace No namespace
Annotations
The maximum number of fields (well samples) in any well
in this PlateAcquisition.
This is only used to speed up user interaction by stopping
the reading of every well sample.
Type PositiveInt
Properties
use optional
Facets
minInclusive 1
Used by
Source
<xsd:attribute name="MaximumFieldCount" use="optional" type="PositiveInt">
  <xsd:annotation>
    <xsd:documentation>The maximum number of fields (well samples) in any well in this PlateAcquisition. This is only used to speed up user interaction by stopping the reading of every well sample.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plate / @ID
Namespace No namespace
Type PlateID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Plate:\S+)|(Plate:\S+))
Used by
Element Plate
Source
<xsd:attribute name="ID" use="required" type="PlateID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plate / @Name
Namespace No namespace
Annotations
The Name identifies the plate to the user.
            It is used much like the ID, and so must be
            unique within the document.

            If a plate name is not available when one is needed
            it will be constructed in the following order:
            1. If name is available use it.
            2. If not use "Start time - End time"
            (NOTE: Not a subtraction! A string representation
            of the two times separated by a dash.)
            3. If these times are not available use the Plate ID.
Type xsd:string
Properties
use optional
Used by
Element Plate
Source
<xsd:attribute name="Name" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>The Name identifies the plate to the user. It is used much like the ID, and so must be unique within the document. If a plate name is not available when one is needed it will be constructed in the following order: 1. If name is available use it. 2. If not use "Start time - End time" (NOTE: Not a subtraction! A string representation of the two times separated by a dash.) 3. If these times are not available use the Plate ID.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plate / @Status
Namespace No namespace
Annotations
A textual annotation of the current state of the plate with respect to the
experiment work-flow; e.g.
1. Seed cell: done; 2. Transfection: done;      3. Gel doc: todo.
Type xsd:string
Properties
use optional
Used by
Element Plate
Source
<xsd:attribute name="Status" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>A textual annotation of the current state of the plate with respect to the experiment work-flow; e.g. 1. Seed cell: done; 2. Transfection: done; 3. Gel doc: todo.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plate / @ExternalIdentifier
Namespace No namespace
Annotations
The ExternalIdentifier attribute may contain a reference to an external database.
Type xsd:string
Properties
use optional
Used by
Element Plate
Source
<xsd:attribute name="ExternalIdentifier" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>The ExternalIdentifier attribute may contain a reference to an external database.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plate / @ColumnNamingConvention
Namespace No namespace
Annotations
The ColumnNamingConvention
Type NamingConvention
Properties
use optional
Facets
enumeration letter
While the label type 'number' has a clear meaning the 'letter'
            type is more complex.

            If you have less than 26 values use letters A to Z.
            Once you get more than 26 values there are several different
            approaches in use.
            One we have see include:

            Single letter, then double letter each running A to Z, right first
            e.g. A, B, C, ... X, Y, Z, AA, AB, AC, ... AY, AZ, BA, BB, ...
            This is the format used by Microsoft Excel so users may be familiar with it.
            This is the approach we use in the OMERO client applications.

            CAPITALsmall, each running A to Z, small first
            e.g. Aa, Ab, Ac, ... Ax, Ay, Az, Ba, Bb, Bc, ... By, Bz, Ca, Cb, ...
            This is in use by some plate manufactures.

            Single letter, then double letter, then triple letter, and so on
            e.g. A, B, C, ... X, Y, Z, AA, BB, CC, ... YY, ZZ, AAA, BBB, ...
            This has the advantage that the first 26 are the same as the standard
            but has a problem an the labels get wider and wider leading to user
            interface problems.
enumeration number
1, 2, 3, ...
Used by
Element Plate
Source
<xsd:attribute name="ColumnNamingConvention" use="optional" type="NamingConvention">
  <xsd:annotation>
    <xsd:documentation>The ColumnNamingConvention</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plate / @RowNamingConvention
Namespace No namespace
Annotations
The RowNamingConvention
Type NamingConvention
Properties
use optional
Facets
enumeration letter
While the label type 'number' has a clear meaning the 'letter'
            type is more complex.

            If you have less than 26 values use letters A to Z.
            Once you get more than 26 values there are several different
            approaches in use.
            One we have see include:

            Single letter, then double letter each running A to Z, right first
            e.g. A, B, C, ... X, Y, Z, AA, AB, AC, ... AY, AZ, BA, BB, ...
            This is the format used by Microsoft Excel so users may be familiar with it.
            This is the approach we use in the OMERO client applications.

            CAPITALsmall, each running A to Z, small first
            e.g. Aa, Ab, Ac, ... Ax, Ay, Az, Ba, Bb, Bc, ... By, Bz, Ca, Cb, ...
            This is in use by some plate manufactures.

            Single letter, then double letter, then triple letter, and so on
            e.g. A, B, C, ... X, Y, Z, AA, BB, CC, ... YY, ZZ, AAA, BBB, ...
            This has the advantage that the first 26 are the same as the standard
            but has a problem an the labels get wider and wider leading to user
            interface problems.
enumeration number
1, 2, 3, ...
Used by
Element Plate
Source
<xsd:attribute name="RowNamingConvention" use="optional" type="NamingConvention">
  <xsd:annotation>
    <xsd:documentation>The RowNamingConvention</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plate / @WellOriginX
Namespace No namespace
Annotations
This defines the X position to use for the origin of the
            fields (individual images) taken in a well. It is used
            with the X in the WellSample to display the fields
            in the correct position relative to each other. Each Well
            in the plate has the same well origin. Units are set by WellOriginXUnit.

            In the OMERO clients by convention we display the WellOrigin
            in the center of the view.
Type xsd:float
Properties
use optional
Used by
Element Plate
Source
<xsd:attribute name="WellOriginX" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>This defines the X position to use for the origin of the fields (individual images) taken in a well. It is used with the X in the WellSample to display the fields in the correct position relative to each other. Each Well in the plate has the same well origin. Units are set by WellOriginXUnit. In the OMERO clients by convention we display the WellOrigin in the center of the view.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plate / @WellOriginXUnit
Namespace No namespace
Annotations
The units of the well origin in X - default:reference frame.
Type UnitsLength
Properties
use optional
default reference frame
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element Plate
Source
<xsd:attribute name="WellOriginXUnit" use="optional" default="reference frame" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the well origin in X - default:reference frame.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plate / @WellOriginY
Namespace No namespace
Annotations
This defines the Y position to use for the origin of the
            fields (individual images) taken in a well. It is used
            with the Y in the WellSample to display the fields
            in the correct position relative to each other. Each Well
            in the plate has the same well origin.  Units are set by WellOriginYUnit.

            In the OMERO clients by convention we display the WellOrigin
            in the center of the view.
Type xsd:float
Properties
use optional
Used by
Element Plate
Source
<xsd:attribute name="WellOriginY" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>This defines the Y position to use for the origin of the fields (individual images) taken in a well. It is used with the Y in the WellSample to display the fields in the correct position relative to each other. Each Well in the plate has the same well origin. Units are set by WellOriginYUnit. In the OMERO clients by convention we display the WellOrigin in the center of the view.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plate / @WellOriginYUnit
Namespace No namespace
Annotations
The units of the well origin in Y - default:reference frame.
Type UnitsLength
Properties
use optional
default reference frame
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element Plate
Source
<xsd:attribute name="WellOriginYUnit" use="optional" default="reference frame" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the well origin in Y - default:reference frame.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plate / @Rows
Namespace No namespace
Annotations
The number of rows in the plate
Type PositiveInt
Properties
use optional
Facets
minInclusive 1
Used by
Element Plate
Source
<xsd:attribute name="Rows" use="optional" type="PositiveInt">
  <xsd:annotation>
    <xsd:documentation>The number of rows in the plate</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plate / @Columns
Namespace No namespace
Annotations
The number of columns in the plate
Type PositiveInt
Properties
use optional
Facets
minInclusive 1
Used by
Element Plate
Source
<xsd:attribute name="Columns" use="optional" type="PositiveInt">
  <xsd:annotation>
    <xsd:documentation>The number of columns in the plate</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plate / @FieldIndex
Namespace No namespace
Annotations
The index of the WellSample to display as the default Field
Type NonNegativeInt
Properties
use optional
Facets
minInclusive 0
Used by
Element Plate
Source
<xsd:attribute name="FieldIndex" use="optional" type="NonNegativeInt">
  <xsd:annotation>
    <xsd:documentation>The index of the WellSample to display as the default Field</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Reagent / @ID
Namespace No namespace
Type ReagentID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Reagent:\S+)|(Reagent:\S+))
Used by
Element Reagent
Source
<xsd:attribute name="ID" use="required" type="ReagentID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Reagent / @Name
Namespace No namespace
Annotations
A short name for the reagent
Type xsd:string
Properties
use optional
Used by
Element Reagent
Source
<xsd:attribute name="Name" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>A short name for the reagent</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Reagent / @ReagentIdentifier
Namespace No namespace
Annotations
This is a reference to an external (to OME) representation of the Reagent.
It serves as a foreign key into an external database. - It is sometimes referred to as ExternalIdentifier.
Type xsd:string
Properties
use optional
Used by
Element Reagent
Source
<xsd:attribute name="ReagentIdentifier" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>This is a reference to an external (to OME) representation of the Reagent. It serves as a foreign key into an external database. - It is sometimes referred to as ExternalIdentifier.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Screen / PlateRef / @ID
Namespace No namespace
Type PlateID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Plate:\S+)|(Plate:\S+))
Used by
Element Screen/PlateRef
Source
<xsd:attribute name="ID" use="required" type="PlateID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Screen / @ID
Namespace No namespace
Type ScreenID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Screen:\S+)|(Screen:\S+))
Used by
Element Screen
Source
<xsd:attribute name="ID" use="required" type="ScreenID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Screen / @Name
Namespace No namespace
Type xsd:string
Properties
use optional
Used by
Element Screen
Source
<xsd:attribute name="Name" use="optional" type="xsd:string"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Screen / @ProtocolIdentifier
Namespace No namespace
Annotations
A pointer to an externally defined protocol, usually in a screening database.
Type xsd:string
Properties
use optional
Used by
Element Screen
Source
<xsd:attribute name="ProtocolIdentifier" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>A pointer to an externally defined protocol, usually in a screening database.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Screen / @ProtocolDescription
Namespace No namespace
Annotations
A description of the screen protocol; may contain very detailed information to
reproduce some of that found in a screening database.
Type xsd:string
Properties
use optional
Used by
Element Screen
Source
<xsd:attribute name="ProtocolDescription" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>A description of the screen protocol; may contain very detailed information to reproduce some of that found in a screening database.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Screen / @ReagentSetDescription
Namespace No namespace
Annotations
A description of the set of reagents; may contain very detailed information to
reproduce some of that information found in a screening database.
Type xsd:string
Properties
use optional
Used by
Element Screen
Source
<xsd:attribute name="ReagentSetDescription" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>A description of the set of reagents; may contain very detailed information to reproduce some of that information found in a screening database.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Screen / @ReagentSetIdentifier
Namespace No namespace
Annotations
A pointer to an externally defined set of reagents, usually in a screening
database/automation database.
Type xsd:string
Properties
use optional
Used by
Element Screen
Source
<xsd:attribute name="ReagentSetIdentifier" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>A pointer to an externally defined set of reagents, usually in a screening database/automation database.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Screen / @Type
Namespace No namespace
Annotations
A human readable identifier for the screen type; e.g. RNAi, cDNA, SiRNA, etc.
This string is likely to become an enumeration in future releases.
Type xsd:string
Properties
use optional
Used by
Element Screen
Source
<xsd:attribute name="Type" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>A human readable identifier for the screen type; e.g. RNAi, cDNA, SiRNA, etc. This string is likely to become an enumeration in future releases.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Experimenter / @ID
Namespace No namespace
Type ExperimenterID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Experimenter:\S+)|(Experimenter:\S+))
Used by
Element Experimenter
Source
<xsd:attribute name="ID" use="required" type="ExperimenterID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Experimenter / @FirstName
Namespace No namespace
Annotations
First name, sometime called christian name or given name or forename. [plain text string]
Type xsd:string
Properties
use optional
Used by
Element Experimenter
Source
<xsd:attribute name="FirstName" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>First name, sometime called christian name or given name or forename. [plain text string]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Experimenter / @MiddleName
Namespace No namespace
Annotations
Any other names. [plain text string]
Type xsd:string
Properties
use optional
Used by
Element Experimenter
Source
<xsd:attribute name="MiddleName" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>Any other names. [plain text string]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Experimenter / @LastName
Namespace No namespace
Annotations
A person's last name sometimes called surname or family name. [plain text string]
Type xsd:string
Properties
use optional
Used by
Element Experimenter
Source
<xsd:attribute name="LastName" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>A person's last name sometimes called surname or family name. [plain text string]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Experimenter / @Email
Namespace No namespace
Annotations
A person's email address. [valid email address as string]
Type xsd:string
Properties
use optional
Used by
Element Experimenter
Source
<xsd:attribute name="Email" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>A person's email address. [valid email address as string]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Experimenter / @Institution
Namespace No namespace
Annotations
A person's Institution
The organizing structure that people belong to other than groups.  A university, or company, etc.
We do not specify a department element, and do not mean for Institution to be used in this way.
We simply wish to say XXX at YYY.  Where YYY has a better chance of being tied to a geographically fixed location
and of being more recognizable than a group of experimenters. [plain text string]
Type xsd:string
Properties
use optional
Used by
Element Experimenter
Source
<xsd:attribute name="Institution" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>A person's Institution The organizing structure that people belong to other than groups. A university, or company, etc. We do not specify a department element, and do not mean for Institution to be used in this way. We simply wish to say XXX at YYY. Where YYY has a better chance of being tied to a geographically fixed location and of being more recognizable than a group of experimenters. [plain text string]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Experimenter / @UserName
Namespace No namespace
Annotations
This is the username of the experimenter (in a 'unix' or 'database' sense). [plain text string]
Type xsd:string
Properties
use optional
Used by
Element Experimenter
Source
<xsd:attribute name="UserName" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <unique/>
      </xsdfu>
    </xsd:appinfo>
    <xsd:documentation>This is the username of the experimenter (in a 'unix' or 'database' sense). [plain text string]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Leader / @ID
Namespace No namespace
Type ExperimenterID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Experimenter:\S+)|(Experimenter:\S+))
Used by
Element Leader
Source
<xsd:attribute name="ID" use="required" type="ExperimenterID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ExperimenterGroup / @Name
Namespace No namespace
Type xsd:string
Properties
use optional
Used by
Source
<xsd:attribute name="Name" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:appinfo>
      <xsdfu xmlns="">
        <unique/>
      </xsdfu>
    </xsd:appinfo>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ExperimenterGroup / @ID
Namespace No namespace
Type ExperimenterGroupID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:ExperimenterGroup:\S+)|(ExperimenterGroup:\S+))
Used by
Source
<xsd:attribute name="ID" use="required" type="ExperimenterGroupID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ManufacturerSpec / @Manufacturer
Namespace No namespace
Annotations
The manufacturer of the component. [plain text string]
Type xsd:string
Properties
use optional
Used by
Complex Type ManufacturerSpec
Source
<xsd:attribute name="Manufacturer" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>The manufacturer of the component. [plain text string]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ManufacturerSpec / @Model
Namespace No namespace
Annotations
The Model of the component. [plain text string]
Type xsd:string
Properties
use optional
Used by
Complex Type ManufacturerSpec
Source
<xsd:attribute name="Model" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>The Model of the component. [plain text string]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ManufacturerSpec / @SerialNumber
Namespace No namespace
Annotations
The serial number of the component. [plain text string]
Type xsd:string
Properties
use optional
Used by
Complex Type ManufacturerSpec
Source
<xsd:attribute name="SerialNumber" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>The serial number of the component. [plain text string]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ManufacturerSpec / @LotNumber
Namespace No namespace
Annotations
The lot number of the component. [plain text string]
Type xsd:string
Properties
use optional
Used by
Complex Type ManufacturerSpec
Source
<xsd:attribute name="LotNumber" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>The lot number of the component. [plain text string]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Microscope / @Type
Namespace No namespace
Type restriction of xsd:string
Properties
use optional
Facets
enumeration Upright
enumeration Inverted
enumeration Dissection
enumeration Electrophysiology
enumeration Other
Used by
Element Microscope
Source
<xsd:attribute name="Type" use="optional">
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="Upright"/>
      <xsd:enumeration value="Inverted"/>
      <xsd:enumeration value="Dissection"/>
      <xsd:enumeration value="Electrophysiology"/>
      <xsd:enumeration value="Other"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute LightSource / @ID
Namespace No namespace
Annotations
A LightSource ID must be specified for each light source, and the individual
light sources can be referred to by their LightSource IDs (eg from Channel).
Type LightSourceID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:LightSource:\S+)|(LightSource:\S+))
Used by
Complex Type LightSource
Source
<xsd:attribute name="ID" use="required" type="LightSourceID">
  <xsd:annotation>
    <xsd:documentation>A LightSource ID must be specified for each light source, and the individual light sources can be referred to by their LightSource IDs (eg from Channel).</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute LightSource / @Power
Namespace No namespace
Annotations
The light-source power. Units are set by PowerUnit.
Type xsd:float
Properties
use optional
Used by
Complex Type LightSource
Source
<xsd:attribute name="Power" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The light-source power. Units are set by PowerUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute LightSource / @PowerUnit
Namespace No namespace
Annotations
The units of the Power - default:milliwatts[mW].
Type UnitsPower
Properties
use optional
default mW
Facets
enumeration YW
yottawatt unit.
enumeration ZW
zettawatt unit.
enumeration EW
exawatt unit.
enumeration PW
petawatt unit.
enumeration TW
terawatt unit.
enumeration GW
gigawatt unit.
enumeration MW
megawatt unit.
enumeration kW
kilowatt unit.
enumeration hW
hectowatt unit.
enumeration daW
decawatt unit.
enumeration W
watt unit.
enumeration dW
deciwatt unit.
enumeration cW
centiwatt unit.
enumeration mW
milliwatt unit.
enumeration µW
microwatt unit.
enumeration nW
nanowatt unit.
enumeration pW
picowatt unit.
enumeration fW
femtowatt unit.
enumeration aW
attowatt unit.
enumeration zW
zeptowatt unit.
enumeration yW
yoctowatt unit.
Used by
Complex Type LightSource
Source
<xsd:attribute name="PowerUnit" use="optional" default="mW" type="UnitsPower">
  <xsd:annotation>
    <xsd:documentation>The units of the Power - default:milliwatts[mW].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Detector / @Gain
Namespace No namespace
Annotations
The Detector Gain for this detector, as a float. [units:none] {used:CCD,EMCCD,PMT}
Type xsd:float
Properties
use optional
Used by
Element Detector
Source
<xsd:attribute name="Gain" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Detector Gain for this detector, as a float. [units:none] {used:CCD,EMCCD,PMT}</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Detector / @Voltage
Namespace No namespace
Annotations
The Voltage of the detector (e.g. PMT voltage) as a float. {used:PMT}
Units are set by VoltageUnit.
Type xsd:float
Properties
use optional
Used by
Element Detector
Source
<xsd:attribute name="Voltage" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Voltage of the detector (e.g. PMT voltage) as a float. {used:PMT} Units are set by VoltageUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Detector / @VoltageUnit
Namespace No namespace
Annotations
The units of the Voltage - default:volts[V].
Type UnitsElectricPotential
Properties
use optional
default V
Facets
enumeration YV
yottavolt unit.
enumeration ZV
zettavolt unit.
enumeration EV
exavolt unit.
enumeration PV
petavolt unit.
enumeration TV
teravolt unit.
enumeration GV
gigavolt unit.
enumeration MV
megavolt unit.
enumeration kV
kilovolt unit.
enumeration hV
hectovolt unit.
enumeration daV
decavolt unit.
enumeration V
volt unit.
enumeration dV
decivolt unit.
enumeration cV
centivolt unit.
enumeration mV
millivolt unit.
enumeration µV
microvolt unit.
enumeration nV
nanovolt unit.
enumeration pV
picovolt unit.
enumeration fV
femtovolt unit.
enumeration aV
attovolt unit.
enumeration zV
zeptovolt unit.
enumeration yV
yoctovolt unit.
Used by
Element Detector
Source
<xsd:attribute name="VoltageUnit" use="optional" default="V" type="UnitsElectricPotential">
  <xsd:annotation>
    <xsd:documentation>The units of the Voltage - default:volts[V].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Detector / @Offset
Namespace No namespace
Annotations
The Detector Offset. [units:none] {used:CCD,EMCCD}
Type xsd:float
Properties
use optional
Used by
Element Detector
Source
<xsd:attribute name="Offset" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Detector Offset. [units:none] {used:CCD,EMCCD}</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Detector / @Zoom
Namespace No namespace
Annotations
The fixed Zoom for a detector. [units:none] {used:PMT}
Type xsd:float
Properties
use optional
Used by
Element Detector
Source
<xsd:attribute name="Zoom" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The fixed Zoom for a detector. [units:none] {used:PMT}</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Detector / @AmplificationGain
Namespace No namespace
Annotations
Gain applied to the detector signal.
This is the electronic gain (as apposed to the inherent gain) that is set for the detector. [units:none] {used:EMCCD#EMGain}
Type xsd:float
Properties
use optional
Used by
Element Detector
Source
<xsd:attribute name="AmplificationGain" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>Gain applied to the detector signal. This is the electronic gain (as apposed to the inherent gain) that is set for the detector. [units:none] {used:EMCCD#EMGain}</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Detector / @ID
Namespace No namespace
Type DetectorID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Detector:\S+)|(Detector:\S+))
Used by
Element Detector
Source
<xsd:attribute name="ID" use="required" type="DetectorID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Detector / @Type
Namespace No namespace
Annotations
The Type of detector. E.g. CCD, PMT, EMCCD etc.
Type restriction of xsd:string
Properties
use optional
Facets
enumeration CCD
enumeration IntensifiedCCD
enumeration AnalogVideo
enumeration PMT
enumeration Photodiode
enumeration Spectroscopy
enumeration LifetimeImaging
enumeration CorrelationSpectroscopy
enumeration FTIR
enumeration EMCCD
enumeration APD
enumeration CMOS
enumeration EBCCD
enumeration Other
Used by
Element Detector
Source
<xsd:attribute name="Type" use="optional">
  <xsd:annotation>
    <xsd:documentation>The Type of detector. E.g. CCD, PMT, EMCCD etc.</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="CCD"/>
      <!-- Charge-Coupled Device -->
      <xsd:enumeration value="IntensifiedCCD"/>
      <xsd:enumeration value="AnalogVideo"/>
      <xsd:enumeration value="PMT"/>
      <!-- Photomultiplier tube -->
      <xsd:enumeration value="Photodiode"/>
      <xsd:enumeration value="Spectroscopy"/>
      <xsd:enumeration value="LifetimeImaging"/>
      <xsd:enumeration value="CorrelationSpectroscopy"/>
      <xsd:enumeration value="FTIR"/>
      <!-- Fourier transform infrared spectroscopy -->
      <xsd:enumeration value="EMCCD"/>
      <!-- Electron Multiplying Charge Coupled Device -->
      <xsd:enumeration value="APD"/>
      <!-- Avalanche Photodiode -->
      <xsd:enumeration value="CMOS"/>
      <!-- complementary metal oxide semiconductor -->
      <xsd:enumeration value="EBCCD"/>
      <!-- electron-bombarded charge-coupled device -->
      <xsd:enumeration value="Other"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Objective / @ID
Namespace No namespace
Type ObjectiveID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Objective:\S+)|(Objective:\S+))
Used by
Element Objective
Source
<xsd:attribute name="ID" use="required" type="ObjectiveID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Objective / @Correction
Namespace No namespace
Annotations
The correction applied to the lens
Type restriction of xsd:string
Properties
use optional
Facets
enumeration UV
enumeration PlanApo
enumeration PlanFluor
enumeration SuperFluor
enumeration VioletCorrected
enumeration Achro
enumeration Achromat
enumeration Fluor
enumeration Fl
enumeration Fluar
enumeration Neofluar
enumeration Fluotar
enumeration Apo
enumeration PlanNeofluar
enumeration Other
Used by
Element Objective
Source
<xsd:attribute name="Correction" use="optional">
  <xsd:annotation>
    <xsd:documentation>The correction applied to the lens</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="UV"/>
      <xsd:enumeration value="PlanApo"/>
      <xsd:enumeration value="PlanFluor"/>
      <xsd:enumeration value="SuperFluor"/>
      <xsd:enumeration value="VioletCorrected"/>
      <xsd:enumeration value="Achro"/>
      <xsd:enumeration value="Achromat"/>
      <xsd:enumeration value="Fluor"/>
      <xsd:enumeration value="Fl"/>
      <xsd:enumeration value="Fluar"/>
      <xsd:enumeration value="Neofluar"/>
      <xsd:enumeration value="Fluotar"/>
      <xsd:enumeration value="Apo"/>
      <xsd:enumeration value="PlanNeofluar"/>
      <xsd:enumeration value="Other"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Objective / @Immersion
Namespace No namespace
Annotations
The immersion medium the lens is designed for
Type restriction of xsd:string
Properties
use optional
Facets
enumeration Oil
enumeration Water
enumeration WaterDipping
enumeration Air
enumeration Multi
enumeration Glycerol
enumeration Other
Used by
Element Objective
Source
<xsd:attribute name="Immersion" use="optional">
  <xsd:annotation>
    <xsd:documentation>The immersion medium the lens is designed for</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="Oil"/>
      <xsd:enumeration value="Water"/>
      <xsd:enumeration value="WaterDipping"/>
      <xsd:enumeration value="Air"/>
      <xsd:enumeration value="Multi"/>
      <xsd:enumeration value="Glycerol"/>
      <xsd:enumeration value="Other"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Objective / @LensNA
Namespace No namespace
Annotations
The numerical aperture of the lens expressed as a floating point (real) number.
Expected range 0.02 - 1.5 [units:none]
Type xsd:float
Properties
use optional
Used by
Element Objective
Source
<xsd:attribute name="LensNA" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The numerical aperture of the lens expressed as a floating point (real) number. Expected range 0.02 - 1.5 [units:none]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Objective / @NominalMagnification
Namespace No namespace
Annotations
The magnification of the lens as specified by the manufacturer - i.e. '60' is a 60X lens. [units:none]
Note: The type of this has been changed from int to float to allow
the specification of additional lenses e.g. 0.5X lens
Type xsd:float
Properties
use optional
Used by
Element Objective
Source
<xsd:attribute name="NominalMagnification" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The magnification of the lens as specified by the manufacturer - i.e. '60' is a 60X lens. [units:none] Note: The type of this has been changed from int to float to allow the specification of additional lenses e.g. 0.5X lens</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Objective / @CalibratedMagnification
Namespace No namespace
Annotations
The magnification of the lens as measured by a calibration process- i.e. '59.987' for a 60X lens. [units:none]
Type xsd:float
Properties
use optional
Used by
Element Objective
Source
<xsd:attribute name="CalibratedMagnification" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The magnification of the lens as measured by a calibration process- i.e. '59.987' for a 60X lens. [units:none]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Objective / @WorkingDistance
Namespace No namespace
Annotations
The working distance of the lens expressed as a floating point (real) number. Units are set by WorkingDistanceUnit.
Type xsd:float
Properties
use optional
Used by
Element Objective
Source
<xsd:attribute name="WorkingDistance" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The working distance of the lens expressed as a floating point (real) number. Units are set by WorkingDistanceUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Objective / @WorkingDistanceUnit
Namespace No namespace
Annotations
The units of the working distance - default:microns[µm].
Type UnitsLength
Properties
use optional
default µm
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element Objective
Source
<xsd:attribute name="WorkingDistanceUnit" use="optional" default="µm" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the working distance - default:microns[µm].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Objective / @Iris
Namespace No namespace
Annotations
Records whether or not the objective was fitted with an Iris. [flag]
Type xsd:boolean
Properties
use optional
Used by
Element Objective
Source
<xsd:attribute name="Iris" use="optional" type="xsd:boolean">
  <xsd:annotation>
    <xsd:documentation>Records whether or not the objective was fitted with an Iris. [flag]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute FilterRef / @ID
Namespace No namespace
Type FilterID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Filter:\S+)|(Filter:\S+))
Used by
Complex Type FilterRef
Source
<xsd:attribute name="ID" use="required" type="FilterID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute DichroicRef / @ID
Namespace No namespace
Type DichroicID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Dichroic:\S+)|(Dichroic:\S+))
Used by
Element DichroicRef
Source
<xsd:attribute name="ID" use="required" type="DichroicID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute FilterSet / @ID
Namespace No namespace
Type FilterSetID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:FilterSet:\S+)|(FilterSet:\S+))
Used by
Element FilterSet
Source
<xsd:attribute name="ID" use="required" type="FilterSetID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute TransmittanceRange / @CutIn
Namespace No namespace
Annotations
CutIn is the wavelength below which there is less than 50% transmittance for a filter. Units are set by CutInUnit.
Type PositiveFloat
Properties
use optional
Facets
minExclusive 0.0
Used by
Source
<xsd:attribute name="CutIn" use="optional" type="PositiveFloat">
  <xsd:annotation>
    <xsd:documentation>CutIn is the wavelength below which there is less than 50% transmittance for a filter. Units are set by CutInUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute TransmittanceRange / @CutInUnit
Namespace No namespace
Annotations
The units of the CutIn - default:nanometres[nm].
Type UnitsLength
Properties
use optional
default nm
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Source
<xsd:attribute name="CutInUnit" use="optional" default="nm" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the CutIn - default:nanometres[nm].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute TransmittanceRange / @CutOut
Namespace No namespace
Annotations
CutOut is the wavelength above which there is less than 50% transmittance for a filter. Units are set by CutOutUnit.
Type PositiveFloat
Properties
use optional
Facets
minExclusive 0.0
Used by
Source
<xsd:attribute name="CutOut" use="optional" type="PositiveFloat">
  <xsd:annotation>
    <xsd:documentation>CutOut is the wavelength above which there is less than 50% transmittance for a filter. Units are set by CutOutUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute TransmittanceRange / @CutOutUnit
Namespace No namespace
Annotations
The units of the CutOut - default:nanometres[nm].
Type UnitsLength
Properties
use optional
default nm
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Source
<xsd:attribute name="CutOutUnit" use="optional" default="nm" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the CutOut - default:nanometres[nm].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute TransmittanceRange / @CutInTolerance
Namespace No namespace
Annotations
CutInTolerance. Units are set by CutInToleranceUnit.
Type NonNegativeFloat
Properties
use optional
Facets
minInclusive 0
Used by
Source
<xsd:attribute name="CutInTolerance" use="optional" type="NonNegativeFloat">
  <xsd:annotation>
    <xsd:documentation>CutInTolerance. Units are set by CutInToleranceUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute TransmittanceRange / @CutInToleranceUnit
Namespace No namespace
Annotations
The units of the CutInTolerance - default:nanometres[nm].
Type UnitsLength
Properties
use optional
default nm
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Source
<xsd:attribute name="CutInToleranceUnit" use="optional" default="nm" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the CutInTolerance - default:nanometres[nm].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute TransmittanceRange / @CutOutTolerance
Namespace No namespace
Annotations
CutOutTolerance. Units are set by CutOutToleranceUnit.
Type NonNegativeFloat
Properties
use optional
Facets
minInclusive 0
Used by
Source
<xsd:attribute name="CutOutTolerance" use="optional" type="NonNegativeFloat">
  <xsd:annotation>
    <xsd:documentation>CutOutTolerance. Units are set by CutOutToleranceUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute TransmittanceRange / @CutOutToleranceUnit
Namespace No namespace
Annotations
The units of the CutOutTolerance - default:nanometres[nm].
Type UnitsLength
Properties
use optional
default nm
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Source
<xsd:attribute name="CutOutToleranceUnit" use="optional" default="nm" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the CutOutTolerance - default:nanometres[nm].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute TransmittanceRange / @Transmittance
Namespace No namespace
Annotations
The amount of light the filter transmits at a maximum [units:none]
A fraction, as a value from 0.0 to 1.0.
Type PercentFraction
Properties
use optional
Facets
maxInclusive 1.0
minInclusive 0.0
Used by
Source
<xsd:attribute name="Transmittance" use="optional" type="PercentFraction">
  <xsd:annotation>
    <xsd:documentation>The amount of light the filter transmits at a maximum [units:none] A fraction, as a value from 0.0 to 1.0.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Filter / @Type
Namespace No namespace
Type restriction of xsd:string
Properties
use optional
Facets
enumeration Dichroic
enumeration LongPass
enumeration ShortPass
enumeration BandPass
enumeration MultiPass
enumeration NeutralDensity
enumeration Tuneable
enumeration Other
Used by
Element Filter
Source
<xsd:attribute name="Type" use="optional">
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="Dichroic"/>
      <xsd:enumeration value="LongPass"/>
      <xsd:enumeration value="ShortPass"/>
      <xsd:enumeration value="BandPass"/>
      <xsd:enumeration value="MultiPass"/>
      <xsd:enumeration value="NeutralDensity"/>
      <xsd:enumeration value="Tuneable"/>
      <xsd:enumeration value="Other"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Filter / @FilterWheel
Namespace No namespace
Annotations
A filter 'wheel' in OME can refer to any arrangement of filters in a filter holder of any shape. It could, for example, be a filter slider. [plain text string]
Type xsd:string
Properties
use optional
Used by
Element Filter
Source
<xsd:attribute name="FilterWheel" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>A filter 'wheel' in OME can refer to any arrangement of filters in a filter holder of any shape. It could, for example, be a filter slider. [plain text string]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Filter / @ID
Namespace No namespace
Type FilterID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Filter:\S+)|(Filter:\S+))
Used by
Element Filter
Source
<xsd:attribute name="ID" use="required" type="FilterID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Dichroic / @ID
Namespace No namespace
Type DichroicID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Dichroic:\S+)|(Dichroic:\S+))
Used by
Element Dichroic
Source
<xsd:attribute name="ID" use="required" type="DichroicID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Instrument / @ID
Namespace No namespace
Type InstrumentID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Instrument:\S+)|(Instrument:\S+))
Used by
Element Instrument
Source
<xsd:attribute name="ID" use="required" type="InstrumentID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ExperimentRef / @ID
Namespace No namespace
Type ExperimentID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Experiment:\S+)|(Experiment:\S+))
Used by
Element ExperimentRef
Source
<xsd:attribute name="ID" use="required" type="ExperimentID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute InstrumentRef / @ID
Namespace No namespace
Type InstrumentID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Instrument:\S+)|(Instrument:\S+))
Used by
Element InstrumentRef
Source
<xsd:attribute name="ID" use="required" type="InstrumentID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ObjectiveSettings / @ID
Namespace No namespace
Type ObjectiveID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Objective:\S+)|(Objective:\S+))
Used by
Source
<xsd:attribute name="ID" use="required" type="ObjectiveID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ObjectiveSettings / @CorrectionCollar
Namespace No namespace
Annotations
The CorrectionCollar is normally an adjustable ring on the
objective. Each has an arbitrary scale on it so the values
is unit-less. [units:none]
Type xsd:float
Properties
use optional
Used by
Source
<xsd:attribute name="CorrectionCollar" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The CorrectionCollar is normally an adjustable ring on the objective. Each has an arbitrary scale on it so the values is unit-less. [units:none]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ObjectiveSettings / @Medium
Namespace No namespace
Type restriction of xsd:string
Properties
use optional
Facets
enumeration Air
enumeration Oil
enumeration Water
enumeration Glycerol
enumeration Other
Used by
Source
<xsd:attribute name="Medium" use="optional">
  <xsd:simpleType>
    <xsd:annotation>
      <xsd:documentation>A description of a Medium used for the lens. The Medium is the actual immersion medium used in this case.</xsd:documentation>
    </xsd:annotation>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="Air"/>
      <xsd:enumeration value="Oil"/>
      <xsd:enumeration value="Water"/>
      <xsd:enumeration value="Glycerol"/>
      <xsd:enumeration value="Other"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ObjectiveSettings / @RefractiveIndex
Namespace No namespace
Annotations
The RefractiveIndex is that of the immersion medium. This is
a ratio so it also unit-less. [units:none]
Type xsd:float
Properties
use optional
Used by
Source
<xsd:attribute name="RefractiveIndex" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The RefractiveIndex is that of the immersion medium. This is a ratio so it also unit-less. [units:none]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Map / M / @K
Namespace No namespace
Type xsd:string
Properties
content simple
Used by
Element Map/M
Source
<xsd:attribute name="K" type="xsd:string"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ImagingEnvironment / @Temperature
Namespace No namespace
Annotations
The Temperature is the define units.
Type xsd:float
Properties
use optional
Used by
Source
<xsd:attribute name="Temperature" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Temperature is the define units.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ImagingEnvironment / @TemperatureUnit
Namespace No namespace
Annotations
The units the Temperature is in - default:Celsius[°C].
Type UnitsTemperature
Properties
use optional
default °C
Facets
enumeration °C
degree Celsius unit.
enumeration °F
degree Fahrenheit unit.
enumeration K
Kelvin unit.
enumeration °R
degree Rankine unit.
Used by
Source
<xsd:attribute name="TemperatureUnit" use="optional" default="°C" type="UnitsTemperature">
  <xsd:annotation>
    <xsd:documentation>The units the Temperature is in - default:Celsius[°C].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ImagingEnvironment / @AirPressure
Namespace No namespace
Annotations
AirPressure is the define units.
Type xsd:float
Properties
use optional
Used by
Source
<xsd:attribute name="AirPressure" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>AirPressure is the define units.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ImagingEnvironment / @AirPressureUnit
Namespace No namespace
Annotations
The units the AirPressure is in - default:millibars[mbar].
Type UnitsPressure
Properties
use optional
default mbar
Facets
enumeration YPa
yottapascal SI unit.
enumeration ZPa
zettapascal SI unit.
enumeration EPa
exapascal SI unit.
enumeration PPa
petapascal SI unit.
enumeration TPa
terapascal SI unit.
enumeration GPa
gigapascal SI unit.
enumeration MPa
megapascal SI unit.
enumeration kPa
kilopascal SI unit.
enumeration hPa
hectopascal SI unit.
enumeration daPa
decapascal SI unit.
enumeration Pa
pascal SI unit.  Note the C++ enum is mixed case due to PASCAL being a macro used by the Microsoft C and C++ compiler.
enumeration dPa
decipascal SI unit.
enumeration cPa
centipascal SI unit.
enumeration mPa
millipascal SI unit.
enumeration µPa
micropascal SI unit.
enumeration nPa
nanopascal SI unit.
enumeration pPa
picopascal SI unit.
enumeration fPa
femtopascal SI unit.
enumeration aPa
attopascal SI unit.
enumeration zPa
zeptopascal SI unit.
enumeration yPa
yoctopascal SI unit.
enumeration bar
bar SI-derived unit.
enumeration Mbar
megabar SI-derived unit.
enumeration kbar
kilobar SI-derived unit.
enumeration dbar
decibar SI-derived unit.
enumeration cbar
centibar SI-derived unit.
enumeration mbar
millibar SI-derived unit.
enumeration atm
standard atmosphere SI-derived unit.
enumeration psi
pound-force per square inch Imperial unit.
enumeration Torr
torr SI-derived unit.
enumeration mTorr
millitorr SI-derived unit.
enumeration mm Hg
millimetre of mercury SI-derived unit
Used by
Source
<xsd:attribute name="AirPressureUnit" use="optional" default="mbar" type="UnitsPressure">
  <xsd:annotation>
    <xsd:documentation>The units the AirPressure is in - default:millibars[mbar].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ImagingEnvironment / @Humidity
Namespace No namespace
Annotations
Humidity around the sample [units:none]
A fraction, as a value from 0.0 to 1.0.
Type PercentFraction
Properties
use optional
Facets
maxInclusive 1.0
minInclusive 0.0
Used by
Source
<xsd:attribute name="Humidity" use="optional" type="PercentFraction">
  <xsd:annotation>
    <xsd:documentation>Humidity around the sample [units:none] A fraction, as a value from 0.0 to 1.0.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ImagingEnvironment / @CO2Percent
Namespace No namespace
Annotations
Carbon Dioxide concentration around the sample [units:none]
A fraction, as a value from 0.0 to 1.0.
Type PercentFraction
Properties
use optional
Facets
maxInclusive 1.0
minInclusive 0.0
Used by
Source
<xsd:attribute name="CO2Percent" use="optional" type="PercentFraction">
  <xsd:annotation>
    <xsd:documentation>Carbon Dioxide concentration around the sample [units:none] A fraction, as a value from 0.0 to 1.0.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute StageLabel / @Name
Namespace No namespace
Type xsd:string
Properties
use required
Used by
Element StageLabel
Source
<xsd:attribute name="Name" use="required" type="xsd:string"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute StageLabel / @X
Namespace No namespace
Annotations
The X position of the stage label. Units are set by XUnit.
Type xsd:float
Properties
use optional
Used by
Element StageLabel
Source
<xsd:attribute name="X" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The X position of the stage label. Units are set by XUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute StageLabel / @XUnit
Namespace No namespace
Annotations
The units of the X stage position - default:[reference frame].
Type UnitsLength
Properties
use optional
default reference frame
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element StageLabel
Source
<xsd:attribute name="XUnit" use="optional" default="reference frame" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the X stage position - default:[reference frame].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute StageLabel / @Y
Namespace No namespace
Annotations
The Y position of the stage label. Units are set by YUnit.
Type xsd:float
Properties
use optional
Used by
Element StageLabel
Source
<xsd:attribute name="Y" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Y position of the stage label. Units are set by YUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute StageLabel / @YUnit
Namespace No namespace
Annotations
The units of the Y stage position - default:[reference frame].
Type UnitsLength
Properties
use optional
default reference frame
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element StageLabel
Source
<xsd:attribute name="YUnit" use="optional" default="reference frame" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the Y stage position - default:[reference frame].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute StageLabel / @Z
Namespace No namespace
Annotations
The Z position of the stage label. Units are set by ZUnit.
Type xsd:float
Properties
use optional
Used by
Element StageLabel
Source
<xsd:attribute name="Z" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Z position of the stage label. Units are set by ZUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute StageLabel / @ZUnit
Namespace No namespace
Annotations
The units of the Z  stage position - default:[reference frame].
Type UnitsLength
Properties
use optional
default reference frame
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element StageLabel
Source
<xsd:attribute name="ZUnit" use="optional" default="reference frame" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the Z stage position - default:[reference frame].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute DetectorSettings / @ID
Namespace No namespace
Type DetectorID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Detector:\S+)|(Detector:\S+))
Used by
Source
<xsd:attribute name="ID" use="required" type="DetectorID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute DetectorSettings / @Offset
Namespace No namespace
Annotations
The Offset of the detector. [units none] {used:CCD,EMCCD}
Type xsd:float
Properties
use optional
Used by
Source
<xsd:attribute name="Offset" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Offset of the detector. [units none] {used:CCD,EMCCD}</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute DetectorSettings / @Gain
Namespace No namespace
Annotations
The Gain of the detector. [units:none] {used:CCD,EMCCD,PMT}
Type xsd:float
Properties
use optional
Used by
Source
<xsd:attribute name="Gain" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Gain of the detector. [units:none] {used:CCD,EMCCD,PMT}</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute DetectorSettings / @Voltage
Namespace No namespace
Annotations
The Voltage of the detector. {used:PMT}
Units are set by VoltageUnit.
Type xsd:float
Properties
use optional
Used by
Source
<xsd:attribute name="Voltage" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Voltage of the detector. {used:PMT} Units are set by VoltageUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute DetectorSettings / @VoltageUnit
Namespace No namespace
Annotations
The units of the Voltage of the detector - default:volts[V]
Type UnitsElectricPotential
Properties
use optional
default V
Facets
enumeration YV
yottavolt unit.
enumeration ZV
zettavolt unit.
enumeration EV
exavolt unit.
enumeration PV
petavolt unit.
enumeration TV
teravolt unit.
enumeration GV
gigavolt unit.
enumeration MV
megavolt unit.
enumeration kV
kilovolt unit.
enumeration hV
hectovolt unit.
enumeration daV
decavolt unit.
enumeration V
volt unit.
enumeration dV
decivolt unit.
enumeration cV
centivolt unit.
enumeration mV
millivolt unit.
enumeration µV
microvolt unit.
enumeration nV
nanovolt unit.
enumeration pV
picovolt unit.
enumeration fV
femtovolt unit.
enumeration aV
attovolt unit.
enumeration zV
zeptovolt unit.
enumeration yV
yoctovolt unit.
Used by
Source
<xsd:attribute name="VoltageUnit" use="optional" default="V" type="UnitsElectricPotential">
  <xsd:annotation>
    <xsd:documentation>The units of the Voltage of the detector - default:volts[V]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute DetectorSettings / @Zoom
Namespace No namespace
Annotations
The Zoom or "Confocal Zoom" or "Scan Zoom" for a detector. [units:none] {used:PMT}
Type xsd:float
Properties
use optional
Used by
Source
<xsd:attribute name="Zoom" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Zoom or "Confocal Zoom" or "Scan Zoom" for a detector. [units:none] {used:PMT}</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute DetectorSettings / @ReadOutRate
Namespace No namespace
Annotations
The speed at which the detector can count pixels.  {used:CCD,EMCCD}
This is the bytes per second that
can be read from the detector (like a baud rate).
Units are set by ReadOutRateUnit.
Type xsd:float
Properties
use optional
Used by
Source
<xsd:attribute name="ReadOutRate" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The speed at which the detector can count pixels. {used:CCD,EMCCD} This is the bytes per second that can be read from the detector (like a baud rate). Units are set by ReadOutRateUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute DetectorSettings / @ReadOutRateUnit
Namespace No namespace
Annotations
The units of the ReadOutRate - default:megahertz[Hz].
Type UnitsFrequency
Properties
use optional
default MHz
Facets
enumeration YHz
yottahertz unit.
enumeration ZHz
zettahertz unit.
enumeration EHz
exahertz unit.
enumeration PHz
petahertz unit.
enumeration THz
terahertz unit.
enumeration GHz
gigahertz unit.
enumeration MHz
megahertz unit.
enumeration kHz
kilohertz unit.
enumeration hHz
hectohertz unit.
enumeration daHz
decahertz unit.
enumeration Hz
hertz unit.
enumeration dHz
decihertz unit.
enumeration cHz
centihertz unit.
enumeration mHz
millihertz unit.
enumeration µHz
microhertz unit.
enumeration nHz
nanohertz unit.
enumeration pHz
picohertz unit.
enumeration fHz
femtohertz unit.
enumeration aHz
attohertz unit.
enumeration zHz
zeptohertz unit.
enumeration yHz
yoctohertz unit.
Used by
Source
<xsd:attribute name="ReadOutRateUnit" use="optional" default="MHz" type="UnitsFrequency">
  <xsd:annotation>
    <xsd:documentation>The units of the ReadOutRate - default:megahertz[Hz].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute DetectorSettings / @Binning
Namespace No namespace
Annotations
Represents the number of pixels that are combined to form larger pixels. {used:CCD,EMCCD}
Type Binning
Properties
use optional
Facets
enumeration 1x1
No binning.
enumeration 2x2
2×2 binning.
enumeration 4x4
4×4 binning.
enumeration 8x8
8×8 binning.
enumeration Other
Other binning value.
Used by
Source
<xsd:attribute name="Binning" use="optional" type="Binning">
  <xsd:annotation>
    <xsd:documentation>Represents the number of pixels that are combined to form larger pixels. {used:CCD,EMCCD}</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute DetectorSettings / @Integration
Namespace No namespace
Annotations
This is the number of sequential frames that get averaged,
to improve the signal-to-noise ratio. [units:none] {used:CCD,EMCCD}
Type PositiveInt
Properties
use optional
Facets
minInclusive 1
Used by
Source
<xsd:attribute name="Integration" use="optional" type="PositiveInt">
  <xsd:annotation>
    <xsd:documentation>This is the number of sequential frames that get averaged, to improve the signal-to-noise ratio. [units:none] {used:CCD,EMCCD}</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute FilterSetRef / @ID
Namespace No namespace
Type FilterSetID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:FilterSet:\S+)|(FilterSet:\S+))
Used by
Element FilterSetRef
Source
<xsd:attribute name="ID" use="required" type="FilterSetID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Channel / @ID
Namespace No namespace
Type ChannelID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Channel:\S+)|(Channel:\S+))
Used by
Element Channel
Source
<xsd:attribute name="ID" use="required" type="ChannelID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Channel / @Name
Namespace No namespace
Annotations
A name for the channel that is suitable for presentation to the user.
Type xsd:string
Properties
use optional
Used by
Element Channel
Source
<xsd:attribute name="Name" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>A name for the channel that is suitable for presentation to the user.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Channel / @SamplesPerPixel
Namespace No namespace
Annotations
The number of samples the detector takes to form each pixel value. [units:none]
Note: This is not the same as "Frame Averaging" - see Integration in DetectorSettings
Type PositiveInt
Properties
use optional
Facets
minInclusive 1
Used by
Element Channel
Source
<xsd:attribute name="SamplesPerPixel" use="optional" type="PositiveInt">
  <xsd:annotation>
    <xsd:documentation>The number of samples the detector takes to form each pixel value. [units:none] Note: This is not the same as "Frame Averaging" - see Integration in DetectorSettings</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Channel / @IlluminationType
Namespace No namespace
Annotations
The method of illumination used to capture the channel.
Type restriction of xsd:string
Properties
use optional
Facets
enumeration Transmitted
enumeration Epifluorescence
enumeration Oblique
enumeration NonLinear
enumeration Other
Used by
Element Channel
Source
<xsd:attribute name="IlluminationType" use="optional">
  <xsd:annotation>
    <xsd:documentation>The method of illumination used to capture the channel.</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="Transmitted"/>
      <xsd:enumeration value="Epifluorescence"/>
      <xsd:enumeration value="Oblique"/>
      <xsd:enumeration value="NonLinear"/>
      <xsd:enumeration value="Other"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Channel / @PinholeSize
Namespace No namespace
Annotations
The optional PinholeSize attribute allows specifying adjustable
pin hole diameters for confocal microscopes. Units are set by PinholeSizeUnit.
Type xsd:float
Properties
use optional
Used by
Element Channel
Source
<xsd:attribute name="PinholeSize" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The optional PinholeSize attribute allows specifying adjustable pin hole diameters for confocal microscopes. Units are set by PinholeSizeUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Channel / @PinholeSizeUnit
Namespace No namespace
Annotations
The units of the pin hole diameter for confocal microscopes - default:microns[µm].
Type UnitsLength
Properties
use optional
default µm
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element Channel
Source
<xsd:attribute name="PinholeSizeUnit" use="optional" default="µm" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the pin hole diameter for confocal microscopes - default:microns[µm].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Channel / @AcquisitionMode
Namespace No namespace
Annotations
AcquisitionMode describes the type of microscopy performed for each channel
Type restriction of xsd:string
Properties
use optional
Facets
enumeration WideField
enumeration LaserScanningConfocalMicroscopy
enumeration SpinningDiskConfocal
enumeration SlitScanConfocal
enumeration MultiPhotonMicroscopy
enumeration StructuredIllumination
enumeration SingleMoleculeImaging
enumeration TotalInternalReflection
enumeration FluorescenceLifetime
enumeration SpectralImaging
enumeration FluorescenceCorrelationSpectroscopy
enumeration NearFieldScanningOpticalMicroscopy
enumeration SecondHarmonicGenerationImaging
enumeration PALM
enumeration STORM
enumeration STED
enumeration TIRF
enumeration FSM
enumeration LCM
enumeration Other
enumeration BrightField
enumeration SweptFieldConfocal
enumeration SPIM
Used by
Element Channel
Source
<xsd:attribute name="AcquisitionMode" use="optional">
  <xsd:annotation>
    <xsd:documentation>AcquisitionMode describes the type of microscopy performed for each channel</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="WideField"/>
      <xsd:enumeration value="LaserScanningConfocalMicroscopy"/>
      <!-- CLSM or LSCM -->
      <xsd:enumeration value="SpinningDiskConfocal"/>
      <xsd:enumeration value="SlitScanConfocal"/>
      <xsd:enumeration value="MultiPhotonMicroscopy"/>
      <!-- laser scanning multiphoton microscopy (LSMM), two photon microscopy -->
      <xsd:enumeration value="StructuredIllumination"/>
      <xsd:enumeration value="SingleMoleculeImaging"/>
      <xsd:enumeration value="TotalInternalReflection"/>
      <xsd:enumeration value="FluorescenceLifetime"/>
      <xsd:enumeration value="SpectralImaging"/>
      <xsd:enumeration value="FluorescenceCorrelationSpectroscopy"/>
      <xsd:enumeration value="NearFieldScanningOpticalMicroscopy"/>
      <!-- NSOM -->
      <xsd:enumeration value="SecondHarmonicGenerationImaging"/>
      <!-- Second harmonic imaging microscopy (SHIM) -->
      <xsd:enumeration value="PALM"/>
      <!-- photo-activated localization microscopy, photo-activation localization microscopy -->
      <xsd:enumeration value="STORM"/>
      <!-- stochastic optical reconstruction microscopy -->
      <xsd:enumeration value="STED"/>
      <!-- stimulated emission depletion -->
      <xsd:enumeration value="TIRF"/>
      <!-- total internal reflection fluorescence (TIRFM) -->
      <xsd:enumeration value="FSM"/>
      <!-- Fluorescence speckle microscopy -->
      <xsd:enumeration value="LCM"/>
      <!-- Laser capture microdissection -->
      <xsd:enumeration value="Other"/>
      <xsd:enumeration value="BrightField"/>
      <xsd:enumeration value="SweptFieldConfocal"/>
      <xsd:enumeration value="SPIM"/>
      <!-- Selective or Single Plane Illumination Microscopy -->
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Channel / @ContrastMethod
Namespace No namespace
Annotations
ContrastMethod describes the technique used to achieve contrast for each channel
Type restriction of xsd:string
Properties
use optional
Facets
enumeration Brightfield
enumeration Phase
enumeration DIC
enumeration HoffmanModulation
enumeration ObliqueIllumination
enumeration PolarizedLight
enumeration Darkfield
enumeration Fluorescence
enumeration Other
Used by
Element Channel
Source
<xsd:attribute name="ContrastMethod" use="optional">
  <xsd:annotation>
    <xsd:documentation>ContrastMethod describes the technique used to achieve contrast for each channel</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="Brightfield"/>
      <xsd:enumeration value="Phase"/>
      <xsd:enumeration value="DIC"/>
      <!-- Differential Interference Contrast -->
      <xsd:enumeration value="HoffmanModulation"/>
      <!-- Hoffman Modulation Contrast (HMC) -->
      <xsd:enumeration value="ObliqueIllumination"/>
      <xsd:enumeration value="PolarizedLight"/>
      <!-- Polarization Microscopy -->
      <xsd:enumeration value="Darkfield"/>
      <!-- Dark Field Imaging -->
      <xsd:enumeration value="Fluorescence"/>
      <xsd:enumeration value="Other"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Channel / @ExcitationWavelength
Namespace No namespace
Annotations
Wavelength of excitation for a particular channel. Units are set by ExcitationWavelengthUnit.
Type PositiveFloat
Properties
use optional
Facets
minExclusive 0.0
Used by
Element Channel
Source
<xsd:attribute name="ExcitationWavelength" use="optional" type="PositiveFloat">
  <xsd:annotation>
    <xsd:documentation>Wavelength of excitation for a particular channel. Units are set by ExcitationWavelengthUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Channel / @ExcitationWavelengthUnit
Namespace No namespace
Annotations
The units of the wavelength of excitation - default:nanometres[nm].
Type UnitsLength
Properties
use optional
default nm
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element Channel
Source
<xsd:attribute name="ExcitationWavelengthUnit" use="optional" default="nm" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the wavelength of excitation - default:nanometres[nm].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Channel / @EmissionWavelength
Namespace No namespace
Annotations
Wavelength of emission for a particular channel. Units are set by EmissionWavelengthUnit.
Type PositiveFloat
Properties
use optional
Facets
minExclusive 0.0
Used by
Element Channel
Source
<xsd:attribute name="EmissionWavelength" use="optional" type="PositiveFloat">
  <xsd:annotation>
    <xsd:documentation>Wavelength of emission for a particular channel. Units are set by EmissionWavelengthUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Channel / @EmissionWavelengthUnit
Namespace No namespace
Annotations
The units of the wavelength of emission - default:nanometres[nm].
Type UnitsLength
Properties
use optional
default nm
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element Channel
Source
<xsd:attribute name="EmissionWavelengthUnit" use="optional" default="nm" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the wavelength of emission - default:nanometres[nm].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Channel / @Fluor
Namespace No namespace
Annotations
The Fluor attribute is used for fluorescence images.
This is the name of the fluorophore used to produce this channel [plain text string]
Type xsd:string
Properties
use optional
Used by
Element Channel
Source
<xsd:attribute name="Fluor" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>The Fluor attribute is used for fluorescence images. This is the name of the fluorophore used to produce this channel [plain text string]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Channel / @NDFilter
Namespace No namespace
Annotations
The NDfilter attribute is used to specify the combined effect of any neutral density filters used.
            The amount of light the filter transmits at a maximum [units:none]
            A fraction, as a value from 0.0 to 1.0.

            NOTE: This was formerly described as "units optical density expressed as a PercentFraction".
            This was how the field had been described in the schema from the beginning but all
            the use of it has been in the opposite direction, i.e. as a amount transmitted,
            not the amount blocked. This change has been made to make the model reflect this usage.
Type xsd:float
Properties
use optional
Used by
Element Channel
Source
<xsd:attribute name="NDFilter" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The NDfilter attribute is used to specify the combined effect of any neutral density filters used. The amount of light the filter transmits at a maximum [units:none] A fraction, as a value from 0.0 to 1.0. NOTE: This was formerly described as "units optical density expressed as a PercentFraction". This was how the field had been described in the schema from the beginning but all the use of it has been in the opposite direction, i.e. as a amount transmitted, not the amount blocked. This change has been made to make the model reflect this usage.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Channel / @PockelCellSetting
Namespace No namespace
Annotations
The PockelCellSetting used for this channel. This is the amount the polarization of the beam is rotated by. [units:none]
Type xsd:int
Properties
use optional
Used by
Element Channel
Source
<xsd:attribute name="PockelCellSetting" use="optional" type="xsd:int">
  <xsd:annotation>
    <xsd:documentation>The PockelCellSetting used for this channel. This is the amount the polarization of the beam is rotated by. [units:none]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Channel / @Color
Namespace No namespace
Annotations
A color used to render this channel - encoded as RGBA
The default value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
Type Color
Properties
use optional
default -1
Used by
Element Channel
Source
<xsd:attribute name="Color" use="optional" type="Color" default="-1">
  <xsd:annotation>
    <xsd:documentation>A color used to render this channel - encoded as RGBA The default value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value) NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute BinData / @Compression
Namespace No namespace
Annotations
Specifies the compression scheme used to encode the data.
Type restriction of xsd:string
Properties
use optional
default none
Facets
enumeration zlib
enumeration bzip2
enumeration none
Used by
Element BinData
Source
<xsd:attribute name="Compression" default="none" use="optional">
  <xsd:annotation>
    <xsd:documentation>Specifies the compression scheme used to encode the data.</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="zlib"/>
      <xsd:enumeration value="bzip2"/>
      <xsd:enumeration value="none"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute BinData / @BigEndian
Namespace No namespace
Annotations
This is true if the binary data was written in BigEndian order. This is dependent on the system architecture of the machine that wrote the pixels. True for essentially all modern CPUs other than Intel and Alpha. All Binary data must be written in the same endian order.
Type xsd:boolean
Properties
use required
Used by
Element BinData
Source
<xsd:attribute name="BigEndian" use="required" type="xsd:boolean">
  <xsd:annotation>
    <xsd:documentation>This is true if the binary data was written in BigEndian order. This is dependent on the system architecture of the machine that wrote the pixels. True for essentially all modern CPUs other than Intel and Alpha. All Binary data must be written in the same endian order.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute BinData / @Length
Namespace No namespace
Annotations
Character count attribute for the BinData field. This is the length of the base-64 encoded block. It allows easy skipping of the block when parsing the file. [unit:bytes]
Type NonNegativeLong
Type hierarchy
Properties
use required
Facets
minInclusive 0
Used by
Element BinData
Source
<xsd:attribute name="Length" use="required">
  <xsd:annotation>
    <xsd:documentation>Character count attribute for the BinData field. This is the length of the base-64 encoded block. It allows easy skipping of the block when parsing the file. [unit:bytes]</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="NonNegativeLong">
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute TiffData / UUID / @FileName
Namespace No namespace
Annotations
This can be used when the IFDs are located in another file.
The / (forward slash) is used as the path separator.
A relative path is recommended. However an absolute path can be specified.
Default is to use the file the ome-xml data has been pulled from.
Note: It is permissible for this to be self referential. The file image1.tiff
may contain ome-xml data that has FilePath="image1.tiff" or "./image1.tiff"
Type xsd:string
Properties
use optional
Used by
Element TiffData/UUID
Source
<xsd:attribute name="FileName" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>This can be used when the IFDs are located in another file. The / (forward slash) is used as the path separator. A relative path is recommended. However an absolute path can be specified. Default is to use the file the ome-xml data has been pulled from. Note: It is permissible for this to be self referential. The file image1.tiff may contain ome-xml data that has FilePath="image1.tiff" or "./image1.tiff"</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute TiffData / @IFD
Namespace No namespace
Annotations
Gives the IFD(s) for which this element is applicable. Indexed from 0.
Default is 0 (the first IFD). [units:none]
Type NonNegativeInt
Properties
use optional
default 0
Facets
minInclusive 0
Used by
Element TiffData
Source
<xsd:attribute name="IFD" type="NonNegativeInt" default="0" use="optional">
  <xsd:annotation>
    <xsd:documentation>Gives the IFD(s) for which this element is applicable. Indexed from 0. Default is 0 (the first IFD). [units:none]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute TiffData / @FirstZ
Namespace No namespace
Annotations
Gives the Z position of the image plane at the specified IFD. Indexed from 0.
Default is 0 (the first Z position). [units:none]
Type NonNegativeInt
Properties
use optional
default 0
Facets
minInclusive 0
Used by
Element TiffData
Source
<xsd:attribute name="FirstZ" type="NonNegativeInt" default="0" use="optional">
  <xsd:annotation>
    <xsd:documentation>Gives the Z position of the image plane at the specified IFD. Indexed from 0. Default is 0 (the first Z position). [units:none]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute TiffData / @FirstT
Namespace No namespace
Annotations
Gives the T position of the image plane at the specified IFD. Indexed from 0.
Default is 0 (the first T position). [units:none]
Type NonNegativeInt
Properties
use optional
default 0
Facets
minInclusive 0
Used by
Element TiffData
Source
<xsd:attribute name="FirstT" type="NonNegativeInt" default="0" use="optional">
  <xsd:annotation>
    <xsd:documentation>Gives the T position of the image plane at the specified IFD. Indexed from 0. Default is 0 (the first T position). [units:none]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute TiffData / @FirstC
Namespace No namespace
Annotations
Gives the C position of the image plane at the specified IFD. Indexed from 0.
Default is 0 (the first C position). [units:none]
Type NonNegativeInt
Properties
use optional
default 0
Facets
minInclusive 0
Used by
Element TiffData
Source
<xsd:attribute name="FirstC" type="NonNegativeInt" default="0" use="optional">
  <xsd:annotation>
    <xsd:documentation>Gives the C position of the image plane at the specified IFD. Indexed from 0. Default is 0 (the first C position). [units:none]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute TiffData / @PlaneCount
Namespace No namespace
Annotations
Gives the number of IFDs affected. Dimension order of IFDs is given by the enclosing
Pixels element's DimensionOrder attribute. Default is the number of IFDs in the TIFF
file, unless an IFD is specified, in which case the default is 1. [units:none]
Type NonNegativeInt
Properties
use optional
Facets
minInclusive 0
Used by
Element TiffData
Source
<xsd:attribute name="PlaneCount" use="optional" type="NonNegativeInt">
  <xsd:annotation>
    <xsd:documentation>Gives the number of IFDs affected. Dimension order of IFDs is given by the enclosing Pixels element's DimensionOrder attribute. Default is the number of IFDs in the TIFF file, unless an IFD is specified, in which case the default is 1. [units:none]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plane / @TheZ
Namespace No namespace
Annotations
The Z-section this plane is for. [units:none]
This is numbered from 0.
Type NonNegativeInt
Properties
use required
Facets
minInclusive 0
Used by
Element Plane
Source
<xsd:attribute name="TheZ" use="required" type="NonNegativeInt">
  <xsd:annotation>
    <xsd:documentation>The Z-section this plane is for. [units:none] This is numbered from 0.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plane / @TheT
Namespace No namespace
Annotations
The timepoint this plane is for. [units:none]
This is numbered from 0.
Type NonNegativeInt
Properties
use required
Facets
minInclusive 0
Used by
Element Plane
Source
<xsd:attribute name="TheT" use="required" type="NonNegativeInt">
  <xsd:annotation>
    <xsd:documentation>The timepoint this plane is for. [units:none] This is numbered from 0.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plane / @TheC
Namespace No namespace
Annotations
The channel this plane is for. [units:none]
This is numbered from 0.
Type NonNegativeInt
Properties
use required
Facets
minInclusive 0
Used by
Element Plane
Source
<xsd:attribute name="TheC" use="required" type="NonNegativeInt">
  <xsd:annotation>
    <xsd:documentation>The channel this plane is for. [units:none] This is numbered from 0.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plane / @DeltaT
Namespace No namespace
Annotations
Time since the beginning of the experiment.
Units are set by DeltaTUnit.
Type xsd:float
Properties
use optional
Used by
Element Plane
Source
<xsd:attribute name="DeltaT" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>Time since the beginning of the experiment. Units are set by DeltaTUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plane / @DeltaTUnit
Namespace No namespace
Annotations
The units of the DeltaT - default:seconds[s].
Type UnitsTime
Properties
use optional
default s
Facets
enumeration Ys
yottasecond SI unit.
enumeration Zs
zettasecond SI unit.
enumeration Es
exasecond SI unit.
enumeration Ps
petasecond SI unit.
enumeration Ts
terasecond SI unit.
enumeration Gs
gigasecond SI unit.
enumeration Ms
megasecond SI unit.
enumeration ks
kilosecond SI unit.
enumeration hs
hectosecond SI unit.
enumeration das
decasecond SI unit.
enumeration s
second SI unit.
enumeration ds
decisecond SI unit.
enumeration cs
centisecond SI unit.
enumeration ms
millisecond SI unit.
enumeration µs
microsecond SI unit.
enumeration ns
nanosecond SI unit.
enumeration ps
picosecond SI unit.
enumeration fs
femtosecond SI unit.
enumeration as
attosecond SI unit.
enumeration zs
zeptosecond SI unit.
enumeration ys
yoctosecond SI unit.
enumeration min
minute SI-derived unit.
enumeration h
hour SI-derived unit.
enumeration d
day SI-derived unit.
Used by
Element Plane
Source
<xsd:attribute name="DeltaTUnit" use="optional" default="s" type="UnitsTime">
  <xsd:annotation>
    <xsd:documentation>The units of the DeltaT - default:seconds[s].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plane / @ExposureTime
Namespace No namespace
Annotations
The length of the exposure.
Units are set by ExposureTimeUnit.
Type xsd:float
Properties
use optional
Used by
Element Plane
Source
<xsd:attribute name="ExposureTime" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The length of the exposure. Units are set by ExposureTimeUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plane / @ExposureTimeUnit
Namespace No namespace
Annotations
The units of the ExposureTime - default:seconds[s].
Type UnitsTime
Properties
use optional
default s
Facets
enumeration Ys
yottasecond SI unit.
enumeration Zs
zettasecond SI unit.
enumeration Es
exasecond SI unit.
enumeration Ps
petasecond SI unit.
enumeration Ts
terasecond SI unit.
enumeration Gs
gigasecond SI unit.
enumeration Ms
megasecond SI unit.
enumeration ks
kilosecond SI unit.
enumeration hs
hectosecond SI unit.
enumeration das
decasecond SI unit.
enumeration s
second SI unit.
enumeration ds
decisecond SI unit.
enumeration cs
centisecond SI unit.
enumeration ms
millisecond SI unit.
enumeration µs
microsecond SI unit.
enumeration ns
nanosecond SI unit.
enumeration ps
picosecond SI unit.
enumeration fs
femtosecond SI unit.
enumeration as
attosecond SI unit.
enumeration zs
zeptosecond SI unit.
enumeration ys
yoctosecond SI unit.
enumeration min
minute SI-derived unit.
enumeration h
hour SI-derived unit.
enumeration d
day SI-derived unit.
Used by
Element Plane
Source
<xsd:attribute name="ExposureTimeUnit" use="optional" default="s" type="UnitsTime">
  <xsd:annotation>
    <xsd:documentation>The units of the ExposureTime - default:seconds[s].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plane / @PositionX
Namespace No namespace
Annotations
The X position of the stage. Units are set by PositionXUnit.
Type xsd:float
Properties
use optional
Used by
Element Plane
Source
<xsd:attribute name="PositionX" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The X position of the stage. Units are set by PositionXUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plane / @PositionXUnit
Namespace No namespace
Annotations
The units of the X stage position - default:[reference frame].
Type UnitsLength
Properties
use optional
default reference frame
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element Plane
Source
<xsd:attribute name="PositionXUnit" use="optional" default="reference frame" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the X stage position - default:[reference frame].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plane / @PositionY
Namespace No namespace
Annotations
The Y position of the stage. Units are set by PositionYUnit.
Type xsd:float
Properties
use optional
Used by
Element Plane
Source
<xsd:attribute name="PositionY" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Y position of the stage. Units are set by PositionYUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plane / @PositionYUnit
Namespace No namespace
Annotations
The units of the Y stage position - default:[reference frame].
Type UnitsLength
Properties
use optional
default reference frame
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element Plane
Source
<xsd:attribute name="PositionYUnit" use="optional" default="reference frame" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the Y stage position - default:[reference frame].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plane / @PositionZ
Namespace No namespace
Annotations
The Z position of the stage. Units are set by PositionZUnit.
Type xsd:float
Properties
use optional
Used by
Element Plane
Source
<xsd:attribute name="PositionZ" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Z position of the stage. Units are set by PositionZUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Plane / @PositionZUnit
Namespace No namespace
Annotations
The units of the Z stage position - default:[reference frame].
Type UnitsLength
Properties
use optional
default reference frame
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element Plane
Source
<xsd:attribute name="PositionZUnit" use="optional" default="reference frame" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the Z stage position - default:[reference frame].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @ID
Namespace No namespace
Type PixelsID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Pixels:\S+)|(Pixels:\S+))
Used by
Element Pixels
Source
<xsd:attribute name="ID" use="required" type="PixelsID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @DimensionOrder
Namespace No namespace
Annotations
The order in which the individual planes of data are interleaved.
Type restriction of xsd:string
Properties
use required
Facets
enumeration XYZCT
enumeration XYZTC
enumeration XYCTZ
enumeration XYCZT
enumeration XYTCZ
enumeration XYTZC
Used by
Element Pixels
Source
<xsd:attribute name="DimensionOrder" use="required">
  <xsd:annotation>
    <xsd:documentation>The order in which the individual planes of data are interleaved.</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="XYZCT"/>
      <xsd:enumeration value="XYZTC"/>
      <xsd:enumeration value="XYCTZ"/>
      <xsd:enumeration value="XYCZT"/>
      <xsd:enumeration value="XYTCZ"/>
      <xsd:enumeration value="XYTZC"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @Type
Namespace No namespace
Annotations
The variable type used to represent each pixel in the image.
Type PixelType
Properties
use required
Facets
enumeration int8
8 bit signed integer.
enumeration int16
16 bit signed integer.
enumeration int32
32 bit signed integer.
enumeration uint8
8 bit unsigned integer.
enumeration uint16
16 bit unsigned integer.
enumeration uint32
32 bit unsigned integer.
enumeration float
single-precision floating point.
enumeration double
double-precision floating point.
enumeration complex
complex single-precision floating point.
enumeration double-complex
complex double-precision floating point.
enumeration bit
bit mask.
Used by
Element Pixels
Source
<xsd:attribute name="Type" use="required" type="PixelType">
  <xsd:annotation>
    <xsd:documentation>The variable type used to represent each pixel in the image.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @SignificantBits
Namespace No namespace
Annotations
The number of bits within the type storing each pixel that are significant.
e.g. you can store 12 bit data within a 16 bit type.
This does not reduce the storage requirements but can be a useful indicator
when processing or viewing the image data.
Type PositiveInt
Properties
use optional
Facets
minInclusive 1
Used by
Element Pixels
Source
<xsd:attribute name="SignificantBits" use="optional" type="PositiveInt">
  <xsd:annotation>
    <xsd:documentation>The number of bits within the type storing each pixel that are significant. e.g. you can store 12 bit data within a 16 bit type. This does not reduce the storage requirements but can be a useful indicator when processing or viewing the image data.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @Interleaved
Namespace No namespace
Annotations
How the channels are arranged within the data block:
true if channels are stored RGBRGBRGB...;
false if channels are stored RRR...GGG...BBB...
Type xsd:boolean
Properties
use optional
Used by
Element Pixels
Source
<xsd:attribute name="Interleaved" use="optional" type="xsd:boolean">
  <xsd:annotation>
    <xsd:documentation>How the channels are arranged within the data block: true if channels are stored RGBRGBRGB...; false if channels are stored RRR...GGG...BBB...</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @BigEndian
Namespace No namespace
Annotations
This is true if the pixels data was written in BigEndian order.

            If this value is present it should match the value used in BinData
            or TiffData. If it does not a reader should honour the value used
            in the BinData or TiffData. This values is useful for MetadataOnly
            files and is to allow for future storage solutions.
Type xsd:boolean
Properties
use optional
Used by
Element Pixels
Source
<xsd:attribute name="BigEndian" use="optional" type="xsd:boolean">
  <xsd:annotation>
    <xsd:documentation>This is true if the pixels data was written in BigEndian order. If this value is present it should match the value used in BinData or TiffData. If it does not a reader should honour the value used in the BinData or TiffData. This values is useful for MetadataOnly files and is to allow for future storage solutions.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @SizeX
Namespace No namespace
Annotations
Dimensional size of pixel data array [units:none]
Type PositiveInt
Properties
use required
Facets
minInclusive 1
Used by
Element Pixels
Source
<xsd:attribute name="SizeX" use="required" type="PositiveInt">
  <xsd:annotation>
    <xsd:documentation>Dimensional size of pixel data array [units:none]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @SizeY
Namespace No namespace
Annotations
Dimensional size of pixel data array [units:none]
Type PositiveInt
Properties
use required
Facets
minInclusive 1
Used by
Element Pixels
Source
<xsd:attribute name="SizeY" use="required" type="PositiveInt">
  <xsd:annotation>
    <xsd:documentation>Dimensional size of pixel data array [units:none]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @SizeZ
Namespace No namespace
Annotations
Dimensional size of pixel data array [units:none]
Type PositiveInt
Properties
use required
Facets
minInclusive 1
Used by
Element Pixels
Source
<xsd:attribute name="SizeZ" use="required" type="PositiveInt">
  <xsd:annotation>
    <xsd:documentation>Dimensional size of pixel data array [units:none]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @SizeC
Namespace No namespace
Annotations
Dimensional size of pixel data array [units:none]
Type PositiveInt
Properties
use required
Facets
minInclusive 1
Used by
Element Pixels
Source
<xsd:attribute name="SizeC" use="required" type="PositiveInt">
  <xsd:annotation>
    <xsd:documentation>Dimensional size of pixel data array [units:none]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @SizeT
Namespace No namespace
Annotations
Dimensional size of pixel data array [units:none]
Type PositiveInt
Properties
use required
Facets
minInclusive 1
Used by
Element Pixels
Source
<xsd:attribute name="SizeT" use="required" type="PositiveInt">
  <xsd:annotation>
    <xsd:documentation>Dimensional size of pixel data array [units:none]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @PhysicalSizeX
Namespace No namespace
Annotations
Physical size of a pixel. Units are set by PhysicalSizeXUnit.
Type PositiveFloat
Properties
use optional
Facets
minExclusive 0.0
Used by
Element Pixels
Source
<xsd:attribute name="PhysicalSizeX" use="optional" type="PositiveFloat">
  <xsd:annotation>
    <xsd:documentation>Physical size of a pixel. Units are set by PhysicalSizeXUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @PhysicalSizeXUnit
Namespace No namespace
Annotations
The units of the physical size of a pixel - default:microns[µm].
Type UnitsLength
Properties
use optional
default µm
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element Pixels
Source
<xsd:attribute name="PhysicalSizeXUnit" use="optional" default="µm" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the physical size of a pixel - default:microns[µm].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @PhysicalSizeY
Namespace No namespace
Annotations
Physical size of a pixel. Units are set by PhysicalSizeYUnit.
Type PositiveFloat
Properties
use optional
Facets
minExclusive 0.0
Used by
Element Pixels
Source
<xsd:attribute name="PhysicalSizeY" use="optional" type="PositiveFloat">
  <xsd:annotation>
    <xsd:documentation>Physical size of a pixel. Units are set by PhysicalSizeYUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @PhysicalSizeYUnit
Namespace No namespace
Annotations
The units of the physical size of a pixel - default:microns[µm].
Type UnitsLength
Properties
use optional
default µm
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element Pixels
Source
<xsd:attribute name="PhysicalSizeYUnit" use="optional" default="µm" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the physical size of a pixel - default:microns[µm].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @PhysicalSizeZ
Namespace No namespace
Annotations
Physical size of a pixel. Units are set by PhysicalSizeZUnit.
Type PositiveFloat
Properties
use optional
Facets
minExclusive 0.0
Used by
Element Pixels
Source
<xsd:attribute name="PhysicalSizeZ" use="optional" type="PositiveFloat">
  <xsd:annotation>
    <xsd:documentation>Physical size of a pixel. Units are set by PhysicalSizeZUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @PhysicalSizeZUnit
Namespace No namespace
Annotations
The units of the physical size of a pixel - default:microns[µm].
Type UnitsLength
Properties
use optional
default µm
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element Pixels
Source
<xsd:attribute name="PhysicalSizeZUnit" use="optional" default="µm" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the physical size of a pixel - default:microns[µm].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @TimeIncrement
Namespace No namespace
Annotations
TimeIncrement is used for time series that have a global
timing specification instead of per-timepoint timing info.
For example in a video stream. Units are set by TimeIncrementUnit.
Type xsd:float
Properties
use optional
Used by
Element Pixels
Source
<xsd:attribute name="TimeIncrement" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>TimeIncrement is used for time series that have a global timing specification instead of per-timepoint timing info. For example in a video stream. Units are set by TimeIncrementUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pixels / @TimeIncrementUnit
Namespace No namespace
Annotations
The units of the TimeIncrement - default:seconds[s].
Type UnitsTime
Properties
use optional
default s
Facets
enumeration Ys
yottasecond SI unit.
enumeration Zs
zettasecond SI unit.
enumeration Es
exasecond SI unit.
enumeration Ps
petasecond SI unit.
enumeration Ts
terasecond SI unit.
enumeration Gs
gigasecond SI unit.
enumeration Ms
megasecond SI unit.
enumeration ks
kilosecond SI unit.
enumeration hs
hectosecond SI unit.
enumeration das
decasecond SI unit.
enumeration s
second SI unit.
enumeration ds
decisecond SI unit.
enumeration cs
centisecond SI unit.
enumeration ms
millisecond SI unit.
enumeration µs
microsecond SI unit.
enumeration ns
nanosecond SI unit.
enumeration ps
picosecond SI unit.
enumeration fs
femtosecond SI unit.
enumeration as
attosecond SI unit.
enumeration zs
zeptosecond SI unit.
enumeration ys
yoctosecond SI unit.
enumeration min
minute SI-derived unit.
enumeration h
hour SI-derived unit.
enumeration d
day SI-derived unit.
Used by
Element Pixels
Source
<xsd:attribute name="TimeIncrementUnit" use="optional" default="s" type="UnitsTime">
  <xsd:annotation>
    <xsd:documentation>The units of the TimeIncrement - default:seconds[s].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute MicrobeamManipulationRef / @ID
Namespace No namespace
Type MicrobeamManipulationID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:MicrobeamManipulation:\S+)|(MicrobeamManipulation:\S+))
Used by
Source
<xsd:attribute name="ID" use="required" type="MicrobeamManipulationID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Image / @ID
Namespace No namespace
Type ImageID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Image:\S+)|(Image:\S+))
Used by
Element Image
Source
<xsd:attribute name="ID" use="required" type="ImageID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Image / @Name
Namespace No namespace
Type xsd:string
Properties
use optional
Used by
Element Image
Source
<xsd:attribute name="Name" use="optional" type="xsd:string"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Annotation / @ID
Namespace No namespace
Type AnnotationID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Annotation:\S+)|(Annotation:\S+))
Used by
Complex Type Annotation
Source
<xsd:attribute name="ID" use="required" type="AnnotationID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Annotation / @Namespace
Namespace No namespace
Annotations
We recommend the inclusion of a namespace for annotations you
define. If it is absent then we assume the annotation is to
use our (OME's) default interpretation for this type.
Type xsd:anyURI
Properties
use optional
Used by
Complex Type Annotation
Source
<xsd:attribute name="Namespace" use="optional" type="xsd:anyURI">
  <xsd:annotation>
    <xsd:documentation>We recommend the inclusion of a namespace for annotations you define. If it is absent then we assume the annotation is to use our (OME's) default interpretation for this type.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Annotation / @Annotator
Namespace No namespace
Annotations
The Annotator is the person who attached this annotation.
e.g. If UserA annotates something with TagB, owned by UserB,
UserA is still the Annotator.
Type ExperimenterID
Type hierarchy
Properties
use optional
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Experimenter:\S+)|(Experimenter:\S+))
Used by
Complex Type Annotation
Source
<xsd:attribute name="Annotator" use="optional" type="ExperimenterID">
  <xsd:annotation>
    <xsd:documentation>The Annotator is the person who attached this annotation. e.g. If UserA annotates something with TagB, owned by UserB, UserA is still the Annotator.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute External / @href
Namespace No namespace
Annotations
file location
Type xsd:anyURI
Properties
use required
Used by
Element External
Source
<xsd:attribute name="href" use="required" type="xsd:anyURI">
  <xsd:annotation>
    <xsd:documentation>file location</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute External / @SHA1
Namespace No namespace
Annotations
The digest of the file specified in href.
Type Hex40
Properties
use required
Facets
length 20
Used by
Element External
Source
<xsd:attribute name="SHA1" use="required" type="Hex40">
  <xsd:annotation>
    <xsd:documentation>The digest of the file specified in href.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute External / @Compression
Namespace No namespace
Annotations
Specifies the compression scheme used to encode the data.
Type restriction of xsd:string
Properties
use optional
default none
Facets
enumeration zlib
enumeration bzip2
enumeration none
Used by
Element External
Source
<xsd:attribute name="Compression" default="none" use="optional">
  <xsd:annotation>
    <xsd:documentation>Specifies the compression scheme used to encode the data.</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="zlib"/>
      <xsd:enumeration value="bzip2"/>
      <xsd:enumeration value="none"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute BinaryFile / @FileName
Namespace No namespace
Type xsd:string
Properties
use required
Used by
Element BinaryFile
Source
<xsd:attribute name="FileName" use="required" type="xsd:string"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute BinaryFile / @Size
Namespace No namespace
Annotations
Size of the uncompressed file. [unit:bytes]
Type NonNegativeLong
Properties
use required
Facets
minInclusive 0
Used by
Element BinaryFile
Source
<xsd:attribute name="Size" use="required" type="NonNegativeLong">
  <xsd:annotation>
    <xsd:documentation>Size of the uncompressed file. [unit:bytes]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute BinaryFile / @MIMEType
Namespace No namespace
Type xsd:string
Properties
use optional
Used by
Element BinaryFile
Source
<xsd:attribute name="MIMEType" use="optional" type="xsd:string"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute AffineTransform / @A00
Namespace No namespace
Type xsd:float
Properties
use required
Used by
Complex Type AffineTransform
Source
<xsd:attribute name="A00" use="required" type="xsd:float"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute AffineTransform / @A10
Namespace No namespace
Type xsd:float
Properties
use required
Used by
Complex Type AffineTransform
Source
<xsd:attribute name="A10" use="required" type="xsd:float"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute AffineTransform / @A01
Namespace No namespace
Type xsd:float
Properties
use required
Used by
Complex Type AffineTransform
Source
<xsd:attribute name="A01" use="required" type="xsd:float"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute AffineTransform / @A11
Namespace No namespace
Type xsd:float
Properties
use required
Used by
Complex Type AffineTransform
Source
<xsd:attribute name="A11" use="required" type="xsd:float"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute AffineTransform / @A02
Namespace No namespace
Type xsd:float
Properties
use required
Used by
Complex Type AffineTransform
Source
<xsd:attribute name="A02" use="required" type="xsd:float"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute AffineTransform / @A12
Namespace No namespace
Type xsd:float
Properties
use required
Used by
Complex Type AffineTransform
Source
<xsd:attribute name="A12" use="required" type="xsd:float"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Shape / @FillColor
Namespace No namespace
Annotations
The color of the fill - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
Type Color
Properties
use optional
Used by
Complex Type Shape
Source
<xsd:attribute name="FillColor" use="optional" type="Color">
  <xsd:annotation>
    <xsd:documentation>The color of the fill - encoded as RGBA The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value) NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Shape / @FillRule
Namespace No namespace
Type restriction of xsd:string
Properties
use optional
Facets
enumeration EvenOdd
enumeration NonZero
Used by
Complex Type Shape
Source
<xsd:attribute name="FillRule" use="optional">
  <xsd:simpleType>
    <xsd:annotation>
      <xsd:documentation>The rule used to decide which parts of the shape to fill. [enumeration]</xsd:documentation>
    </xsd:annotation>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="EvenOdd"/>
      <xsd:enumeration value="NonZero"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Shape / @StrokeColor
Namespace No namespace
Annotations
The color of the stroke  - encoded as RGBA
The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value)
NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.
Type Color
Properties
use optional
Used by
Complex Type Shape
Source
<xsd:attribute name="StrokeColor" use="optional" type="Color">
  <xsd:annotation>
    <xsd:documentation>The color of the stroke - encoded as RGBA The value "-1" is #FFFFFFFF so solid white (it is a signed 32 bit value) NOTE: Prior to the 2012-06 schema the default value was incorrect and produced a transparent red not solid white.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Shape / @StrokeWidth
Namespace No namespace
Annotations
The width of the stroke. Units are set by StrokeWidthUnit.
Type xsd:float
Properties
use optional
Used by
Complex Type Shape
Source
<xsd:attribute name="StrokeWidth" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The width of the stroke. Units are set by StrokeWidthUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Shape / @StrokeWidthUnit
Namespace No namespace
Annotations
The units used for the stroke width.
Type UnitsLength
Properties
use optional
default pixel
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Complex Type Shape
Source
<xsd:attribute name="StrokeWidthUnit" use="optional" default="pixel" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units used for the stroke width.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Shape / @StrokeDashArray
Namespace No namespace
Annotations
e.g. "none", "10 20 30 10"
Type xsd:string
Properties
use optional
Used by
Complex Type Shape
Source
<xsd:attribute name="StrokeDashArray" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>e.g. "none", "10 20 30 10"</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Shape / @Text
Namespace No namespace
Type xsd:string
Properties
use optional
Used by
Complex Type Shape
Source
<xsd:attribute name="Text" use="optional" type="xsd:string"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Shape / @FontFamily
Namespace No namespace
Type restriction of xsd:string
Properties
use optional
Facets
enumeration serif
enumeration sans-serif
enumeration cursive
enumeration fantasy
enumeration monospace
Used by
Complex Type Shape
Source
<xsd:attribute name="FontFamily" use="optional">
  <xsd:simpleType>
    <xsd:annotation>
      <xsd:documentation>The font family used to draw the text. [enumeration] Note: these values are all lower case so they match the standard HTML/CSS values. "fantasy" has been included for completeness; we do not recommend its regular use. This attribute is under consideration for removal from the OME-XML schema.</xsd:documentation>
    </xsd:annotation>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="serif"/>
      <xsd:enumeration value="sans-serif"/>
      <xsd:enumeration value="cursive"/>
      <xsd:enumeration value="fantasy"/>
      <xsd:enumeration value="monospace"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Shape / @FontSize
Namespace No namespace
Annotations
Size of the font. Units are set by FontSizeUnit.
Type NonNegativeInt
Properties
use optional
Facets
minInclusive 0
Used by
Complex Type Shape
Source
<xsd:attribute name="FontSize" use="optional" type="NonNegativeInt">
  <xsd:annotation>
    <xsd:documentation>Size of the font. Units are set by FontSizeUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Shape / @FontSizeUnit
Namespace No namespace
Annotations
The units used for the font size.
Type UnitsLength
Properties
use optional
default pt
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Complex Type Shape
Source
<xsd:attribute name="FontSizeUnit" use="optional" default="pt" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units used for the font size.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Shape / @FontStyle
Namespace No namespace
Type restriction of xsd:string
Properties
use optional
Facets
enumeration Bold
enumeration BoldItalic
enumeration Italic
enumeration Normal
Used by
Complex Type Shape
Source
<xsd:attribute name="FontStyle" use="optional">
  <xsd:simpleType>
    <xsd:annotation>
      <xsd:documentation>The style and weight applied to the text. [enumeration] This is a simplified combination of the HTML/CSS attributes font-style AND font-weight.</xsd:documentation>
    </xsd:annotation>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="Bold"/>
      <xsd:enumeration value="BoldItalic"/>
      <xsd:enumeration value="Italic"/>
      <xsd:enumeration value="Normal"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Shape / @Locked
Namespace No namespace
Annotations
Controls whether the shape is locked and read only,
true is locked, false is editable.
Type xsd:boolean
Properties
use optional
Used by
Complex Type Shape
Source
<xsd:attribute name="Locked" use="optional" type="xsd:boolean">
  <xsd:annotation>
    <xsd:documentation>Controls whether the shape is locked and read only, true is locked, false is editable.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Shape / @ID
Namespace No namespace
Type ShapeID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Shape:\S+)|(Shape:\S+))
Used by
Complex Type Shape
Source
<xsd:attribute name="ID" use="required" type="ShapeID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Shape / @TheZ
Namespace No namespace
Annotations
The z-section the ROI applies to. If not specified then
the ROI applies to all the z-sections of the image. [units:none]
This is numbered from 0.
Type NonNegativeInt
Properties
use optional
Facets
minInclusive 0
Used by
Complex Type Shape
Source
<xsd:attribute name="TheZ" use="optional" type="NonNegativeInt">
  <xsd:annotation>
    <xsd:documentation>The z-section the ROI applies to. If not specified then the ROI applies to all the z-sections of the image. [units:none] This is numbered from 0.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Shape / @TheT
Namespace No namespace
Annotations
The timepoint the ROI applies to. If not specified then
the ROI applies to all the timepoints of the image. [units:none]
This is numbered from 0.
Type NonNegativeInt
Properties
use optional
Facets
minInclusive 0
Used by
Complex Type Shape
Source
<xsd:attribute name="TheT" use="optional" type="NonNegativeInt">
  <xsd:annotation>
    <xsd:documentation>The timepoint the ROI applies to. If not specified then the ROI applies to all the timepoints of the image. [units:none] This is numbered from 0.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Shape / @TheC
Namespace No namespace
Annotations
The channel the ROI applies to. If not specified then
the ROI applies to all the channels of the image. [units:none]
This is numbered from 0.
Type NonNegativeInt
Properties
use optional
Facets
minInclusive 0
Used by
Complex Type Shape
Source
<xsd:attribute name="TheC" use="optional" type="NonNegativeInt">
  <xsd:annotation>
    <xsd:documentation>The channel the ROI applies to. If not specified then the ROI applies to all the channels of the image. [units:none] This is numbered from 0.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ROI / @ID
Namespace No namespace
Type ROIID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+)|(\S+))
Used by
Element ROI
Source
<xsd:attribute name="ID" use="required" type="ROIID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ROI / @Name
Namespace No namespace
Annotations
The Name identifies the ROI to the user. [plain-text string]
Type xsd:string
Properties
use optional
Used by
Element ROI
Source
<xsd:attribute name="Name" use="optional" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>The Name identifies the ROI to the user. [plain-text string]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute OME / BinaryOnly / @MetadataFile
Namespace No namespace
Annotations
Filename of the OME-XML metadata file for
this binary data. If the file cannot be found, a search can
be performed based on the UUID.
Type xsd:string
Properties
use required
Used by
Element OME/BinaryOnly
Source
<xsd:attribute name="MetadataFile" type="xsd:string" use="required">
  <xsd:annotation>
    <xsd:documentation>Filename of the OME-XML metadata file for this binary data. If the file cannot be found, a search can be performed based on the UUID.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute OME / BinaryOnly / @UUID
Namespace No namespace
Annotations
The unique identifier of another OME-XML
block whose metadata describes the binary data in this file.
This UUID is considered authoritative regardless of
mismatches in the filename.
Type UniversallyUniqueIdentifier
Properties
use required
Facets
pattern (urn:uuid:[0-9a-fA-F]{8}-[0-9a-fA-F]{4}-[0-9a-fA-F]{4}-[0-9a-fA-F]{4}-[0-9a-fA-F]{12})
Used by
Element OME/BinaryOnly
Source
<xsd:attribute name="UUID" type="UniversallyUniqueIdentifier" use="required">
  <xsd:annotation>
    <xsd:documentation>The unique identifier of another OME-XML block whose metadata describes the binary data in this file. This UUID is considered authoritative regardless of mismatches in the filename.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute OME / @UUID
Namespace No namespace
Annotations
This unique identifier is used to keep track of multi part files.
            It allows the links between files to survive renaming.

            While OPTIONAL in the general case this is REQUIRED in a
            MetadataOnly Companion to a collection of BinaryOnly files.
Type UniversallyUniqueIdentifier
Properties
use optional
Facets
pattern (urn:uuid:[0-9a-fA-F]{8}-[0-9a-fA-F]{4}-[0-9a-fA-F]{4}-[0-9a-fA-F]{4}-[0-9a-fA-F]{12})
Used by
Element OME
Source
<xsd:attribute name="UUID" type="UniversallyUniqueIdentifier" use="optional">
  <xsd:annotation>
    <xsd:documentation>This unique identifier is used to keep track of multi part files. It allows the links between files to survive renaming. While OPTIONAL in the general case this is REQUIRED in a MetadataOnly Companion to a collection of BinaryOnly files.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute OME / @Creator
Namespace No namespace
Annotations
This is the name of the creating application of the OME-XML
and preferably its full version.
e.g "CompanyName, SoftwareName, V2.6.3456"
This is optional but we hope it will be set by applications
writing out OME-XML from scratch.
Type xsd:string
Properties
use optional
Used by
Element OME
Source
<xsd:attribute name="Creator" type="xsd:string" use="optional">
  <xsd:annotation>
    <xsd:documentation>This is the name of the creating application of the OME-XML and preferably its full version. e.g "CompanyName, SoftwareName, V2.6.3456" This is optional but we hope it will be set by applications writing out OME-XML from scratch.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Pump / @ID
Namespace No namespace
Type LightSourceID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:LightSource:\S+)|(LightSource:\S+))
Used by
Element Pump
Source
<xsd:attribute name="ID" use="required" type="LightSourceID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Laser / @Type
Namespace No namespace
Annotations
Type is the general category of laser.
Type restriction of xsd:string
Properties
use optional
Facets
enumeration Excimer
enumeration Gas
enumeration MetalVapor
enumeration SolidState
enumeration Dye
enumeration Semiconductor
enumeration FreeElectron
enumeration Other
Used by
Element Laser
Source
<xsd:attribute name="Type" use="optional">
  <xsd:annotation>
    <xsd:documentation>Type is the general category of laser.</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="Excimer"/>
      <xsd:enumeration value="Gas"/>
      <xsd:enumeration value="MetalVapor"/>
      <xsd:enumeration value="SolidState"/>
      <xsd:enumeration value="Dye"/>
      <xsd:enumeration value="Semiconductor"/>
      <xsd:enumeration value="FreeElectron"/>
      <xsd:enumeration value="Other"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Laser / @LaserMedium
Namespace No namespace
Annotations
The Medium attribute specifies the actual lasing medium
for a given laser type.
Type restriction of xsd:string
Properties
use optional
Facets
enumeration Cu
enumeration Ag
enumeration ArFl
enumeration ArCl
enumeration KrFl
enumeration KrCl
enumeration XeFl
enumeration XeCl
enumeration XeBr
enumeration N
enumeration Ar
enumeration Kr
enumeration Xe
enumeration HeNe
enumeration HeCd
enumeration CO
enumeration CO2
enumeration H2O
enumeration HFl
enumeration NdGlass
enumeration NdYAG
enumeration ErGlass
enumeration ErYAG
enumeration HoYLF
enumeration HoYAG
enumeration Ruby
enumeration TiSapphire
enumeration Alexandrite
enumeration Rhodamine6G
enumeration CoumarinC30
enumeration GaAs
enumeration GaAlAs
enumeration EMinus
enumeration Other
Used by
Element Laser
Source
<xsd:attribute name="LaserMedium" use="optional">
  <xsd:annotation>
    <xsd:documentation>The Medium attribute specifies the actual lasing medium for a given laser type.</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <!-- MetalVaporLaserMedia -->
      <xsd:enumeration value="Cu"/>
      <xsd:enumeration value="Ag"/>
      <!-- ExcimerLaserMedia -->
      <xsd:enumeration value="ArFl"/>
      <xsd:enumeration value="ArCl"/>
      <xsd:enumeration value="KrFl"/>
      <xsd:enumeration value="KrCl"/>
      <xsd:enumeration value="XeFl"/>
      <xsd:enumeration value="XeCl"/>
      <xsd:enumeration value="XeBr"/>
      <!-- GasLaserMedia -->
      <xsd:enumeration value="N"/>
      <xsd:enumeration value="Ar"/>
      <xsd:enumeration value="Kr"/>
      <xsd:enumeration value="Xe"/>
      <xsd:enumeration value="HeNe"/>
      <xsd:enumeration value="HeCd"/>
      <xsd:enumeration value="CO"/>
      <xsd:enumeration value="CO2"/>
      <xsd:enumeration value="H2O"/>
      <xsd:enumeration value="HFl"/>
      <!-- SolidStateLaserMedia -->
      <xsd:enumeration value="NdGlass"/>
      <xsd:enumeration value="NdYAG"/>
      <xsd:enumeration value="ErGlass"/>
      <xsd:enumeration value="ErYAG"/>
      <xsd:enumeration value="HoYLF"/>
      <xsd:enumeration value="HoYAG"/>
      <xsd:enumeration value="Ruby"/>
      <xsd:enumeration value="TiSapphire"/>
      <xsd:enumeration value="Alexandrite"/>
      <!-- DyeLaserMedia -->
      <xsd:enumeration value="Rhodamine6G"/>
      <xsd:enumeration value="CoumarinC30"/>
      <!-- SemiconductorLaserMedia -->
      <xsd:enumeration value="GaAs"/>
      <xsd:enumeration value="GaAlAs"/>
      <!-- FreeElectronLaserMedia -->
      <xsd:enumeration value="EMinus"/>
      <!-- OtherLaserMedia -->
      <xsd:enumeration value="Other"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Laser / @Wavelength
Namespace No namespace
Annotations
The Wavelength of the laser. Units are set by WavelengthUnit.
Type PositiveFloat
Properties
use optional
Facets
minExclusive 0.0
Used by
Element Laser
Source
<xsd:attribute name="Wavelength" use="optional" type="PositiveFloat">
  <xsd:annotation>
    <xsd:documentation>The Wavelength of the laser. Units are set by WavelengthUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Laser / @WavelengthUnit
Namespace No namespace
Annotations
The units of the Wavelength - default:nanometres[nm].
Type UnitsLength
Properties
use optional
default nm
Facets
enumeration Ym
yottameter SI unit.
enumeration Zm
zettameter SI unit.
enumeration Em
exameter SI unit.
enumeration Pm
petameter SI unit.
enumeration Tm
terameter SI unit.
enumeration Gm
gigameter SI unit.
enumeration Mm
megameter SI unit.
enumeration km
kilometer SI unit.
enumeration hm
hectometer SI unit.
enumeration dam
decameter SI unit.
enumeration m
meter SI unit.
enumeration dm
decimeter SI unit.
enumeration cm
centimeter SI unit.
enumeration mm
millimeter SI unit.
enumeration µm
micrometer SI unit.
enumeration nm
nanometer SI unit.
enumeration pm
picometer SI unit.
enumeration fm
femtometer SI unit.
enumeration am
attometer SI unit.
enumeration zm
zeptometer SI unit.
enumeration ym
yoctometer SI unit.
enumeration Å
ångström SI-derived unit.
enumeration thou
thou Imperial unit (or mil, 1/1000 inch).
enumeration li
line Imperial unit (1/12 inch).
enumeration in
inch Imperial unit.
enumeration ft
foot Imperial unit.
enumeration yd
yard Imperial unit.
enumeration mi
terrestrial mile Imperial unit.
enumeration ua
astronomical unit SI-derived unit. The official term is ua as the SI standard assigned AU to absorbance unit.
enumeration ly
light year.
enumeration pc
parsec.
enumeration pt
typography point Imperial-derived unit (1/72 inch). Use of this unit should be limited to font sizes.
enumeration pixel
pixel abstract unit.  This is not convertible to any other length unit without a calibrated scaling factor. Its use should should be limited to ROI objects, and converted to an appropriate length units using the PhysicalSize units of the Image the ROI is attached to.
enumeration reference frame
reference frame abstract unit.  This is not convertible to any other length unit without a scaling factor.  Its use should be limited to uncalibrated stage positions, and converted to an appropriate length unit using a calibrated scaling factor.
Used by
Element Laser
Source
<xsd:attribute name="WavelengthUnit" use="optional" default="nm" type="UnitsLength">
  <xsd:annotation>
    <xsd:documentation>The units of the Wavelength - default:nanometres[nm].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Laser / @FrequencyMultiplication
Namespace No namespace
Annotations
FrequencyMultiplication that may be specified. [units:none]
Type PositiveInt
Properties
use optional
Facets
minInclusive 1
Used by
Element Laser
Source
<xsd:attribute name="FrequencyMultiplication" use="optional" type="PositiveInt">
  <xsd:annotation>
    <xsd:documentation>FrequencyMultiplication that may be specified. [units:none]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Laser / @Tuneable
Namespace No namespace
Annotations
Whether or not the laser is Tuneable [flag]
Type xsd:boolean
Properties
use optional
Used by
Element Laser
Source
<xsd:attribute name="Tuneable" use="optional" type="xsd:boolean">
  <xsd:annotation>
    <xsd:documentation>Whether or not the laser is Tuneable [flag]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Laser / @Pulse
Namespace No namespace
Annotations
The Pulse mode of the laser.
Type restriction of xsd:string
Properties
use optional
Facets
enumeration CW
enumeration Single
enumeration QSwitched
enumeration Repetitive
enumeration ModeLocked
enumeration Other
Used by
Element Laser
Source
<xsd:attribute name="Pulse" use="optional">
  <xsd:annotation>
    <xsd:documentation>The Pulse mode of the laser.</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="CW"/>
      <xsd:enumeration value="Single"/>
      <xsd:enumeration value="QSwitched"/>
      <xsd:enumeration value="Repetitive"/>
      <xsd:enumeration value="ModeLocked"/>
      <xsd:enumeration value="Other"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Laser / @PockelCell
Namespace No namespace
Annotations
If true the laser has a PockelCell to rotate the polarization of the beam. [flag]
Type xsd:boolean
Properties
use optional
Used by
Element Laser
Source
<xsd:attribute name="PockelCell" use="optional" type="xsd:boolean">
  <xsd:annotation>
    <xsd:documentation>If true the laser has a PockelCell to rotate the polarization of the beam. [flag]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Laser / @RepetitionRate
Namespace No namespace
Annotations
The is the rate in Hz at which the laser pulses if
the Pulse type is 'Repetitive'. hertz[Hz]
Units are set by RepetitionRateUnit.
Type xsd:float
Properties
use optional
Used by
Element Laser
Source
<xsd:attribute name="RepetitionRate" use="optional" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The is the rate in Hz at which the laser pulses if the Pulse type is 'Repetitive'. hertz[Hz] Units are set by RepetitionRateUnit.</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Laser / @RepetitionRateUnit
Namespace No namespace
Annotations
The units of the RepetitionRate - default:hertz[Hz].
Type UnitsFrequency
Properties
use optional
default Hz
Facets
enumeration YHz
yottahertz unit.
enumeration ZHz
zettahertz unit.
enumeration EHz
exahertz unit.
enumeration PHz
petahertz unit.
enumeration THz
terahertz unit.
enumeration GHz
gigahertz unit.
enumeration MHz
megahertz unit.
enumeration kHz
kilohertz unit.
enumeration hHz
hectohertz unit.
enumeration daHz
decahertz unit.
enumeration Hz
hertz unit.
enumeration dHz
decihertz unit.
enumeration cHz
centihertz unit.
enumeration mHz
millihertz unit.
enumeration µHz
microhertz unit.
enumeration nHz
nanohertz unit.
enumeration pHz
picohertz unit.
enumeration fHz
femtohertz unit.
enumeration aHz
attohertz unit.
enumeration zHz
zeptohertz unit.
enumeration yHz
yoctohertz unit.
Used by
Element Laser
Source
<xsd:attribute name="RepetitionRateUnit" use="optional" default="Hz" type="UnitsFrequency">
  <xsd:annotation>
    <xsd:documentation>The units of the RepetitionRate - default:hertz[Hz].</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Arc / @Type
Namespace No namespace
Annotations
The type of Arc lamp.
Type restriction of xsd:string
Properties
use optional
Facets
enumeration Hg
enumeration Xe
enumeration HgXe
enumeration Other
Used by
Element Arc
Source
<xsd:attribute name="Type" use="optional">
  <xsd:annotation>
    <xsd:documentation>The type of Arc lamp.</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="Hg"/>
      <xsd:enumeration value="Xe"/>
      <xsd:enumeration value="HgXe"/>
      <xsd:enumeration value="Other"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Filament / @Type
Namespace No namespace
Annotations
The type of filament.
Type restriction of xsd:string
Properties
use optional
Facets
enumeration Incandescent
enumeration Halogen
enumeration Other
Used by
Element Filament
Source
<xsd:attribute name="Type" use="optional">
  <xsd:annotation>
    <xsd:documentation>The type of filament.</xsd:documentation>
  </xsd:annotation>
  <xsd:simpleType>
    <xsd:restriction base="xsd:string">
      <xsd:enumeration value="Incandescent"/>
      <xsd:enumeration value="Halogen"/>
      <xsd:enumeration value="Other"/>
    </xsd:restriction>
  </xsd:simpleType>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ChannelRef / @ID
Namespace No namespace
Type ChannelID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Channel:\S+)|(Channel:\S+))
Used by
Element ChannelRef
Source
<xsd:attribute name="ID" use="required" type="ChannelID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute ProjectRef / @ID
Namespace No namespace
Type ProjectID
Type hierarchy
Properties
use required
Facets
pattern ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:\S+:\S+)|(\S+:\S+)) & ((urn:lsid:([\w\-\.]+\.[\w\-\.]+)+:Project:\S+)|(Project:\S+))
Used by
Element ProjectRef
Source
<xsd:attribute name="ID" use="required" type="ProjectID"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Rectangle / @X
Namespace No namespace
Annotations
The X value of the left edge or the rectangle. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Rectangle
Source
<xsd:attribute name="X" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The X value of the left edge or the rectangle. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Rectangle / @Y
Namespace No namespace
Annotations
The y value of the top edge or the rectangle. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Rectangle
Source
<xsd:attribute name="Y" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The y value of the top edge or the rectangle. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Rectangle / @Width
Namespace No namespace
Annotations
The width of the rectangle. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Rectangle
Source
<xsd:attribute name="Width" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The width of the rectangle. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Rectangle / @Height
Namespace No namespace
Annotations
The height of the rectangle. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Rectangle
Source
<xsd:attribute name="Height" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The height of the rectangle. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Mask / @X
Namespace No namespace
Annotations
The X coordinate of the left side of the image. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Mask
Source
<xsd:attribute name="X" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The X coordinate of the left side of the image. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Mask / @Y
Namespace No namespace
Annotations
The Y coordinate of the top side of the image. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Mask
Source
<xsd:attribute name="Y" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Y coordinate of the top side of the image. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Mask / @Width
Namespace No namespace
Annotations
The width of the mask. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Mask
Source
<xsd:attribute name="Width" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The width of the mask. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Mask / @Height
Namespace No namespace
Annotations
The height of the mask. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Mask
Source
<xsd:attribute name="Height" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The height of the mask. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Point / @X
Namespace No namespace
Annotations
The X coordinate of the point. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Point
Source
<xsd:attribute name="X" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The X coordinate of the point. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Point / @Y
Namespace No namespace
Annotations
The Y coordinate of the point. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Point
Source
<xsd:attribute name="Y" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Y coordinate of the point. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Ellipse / @X
Namespace No namespace
Annotations
The X coordinate of the center of the ellipse. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Ellipse
Source
<xsd:attribute name="X" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The X coordinate of the center of the ellipse. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Ellipse / @Y
Namespace No namespace
Annotations
The Y coordinate of the center of the ellipse. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Ellipse
Source
<xsd:attribute name="Y" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Y coordinate of the center of the ellipse. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Ellipse / @RadiusX
Namespace No namespace
Annotations
The horizontal radius of the ellipse. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Ellipse
Source
<xsd:attribute name="RadiusX" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The horizontal radius of the ellipse. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Ellipse / @RadiusY
Namespace No namespace
Annotations
The vertical radius of the ellipse. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Ellipse
Source
<xsd:attribute name="RadiusY" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The vertical radius of the ellipse. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Line / @X1
Namespace No namespace
Annotations
The X coordinate of the start of the line. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Line
Source
<xsd:attribute name="X1" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The X coordinate of the start of the line. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Line / @Y1
Namespace No namespace
Annotations
The Y coordinate of the start of the line. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Line
Source
<xsd:attribute name="Y1" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Y coordinate of the start of the line. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Line / @X2
Namespace No namespace
Annotations
The X coordinate of the end of the line. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Line
Source
<xsd:attribute name="X2" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The X coordinate of the end of the line. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Line / @Y2
Namespace No namespace
Annotations
The Y coordinate of the end of the line. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Line
Source
<xsd:attribute name="Y2" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>The Y coordinate of the end of the line. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Line / @MarkerStart
Namespace No namespace
Type Marker
Properties
use optional
Facets
enumeration Arrow
Used by
Element Line
Source
<xsd:attribute name="MarkerStart" use="optional" type="Marker"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Line / @MarkerEnd
Namespace No namespace
Type Marker
Properties
use optional
Facets
enumeration Arrow
Used by
Element Line
Source
<xsd:attribute name="MarkerEnd" use="optional" type="Marker"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Polyline / @Points
Namespace No namespace
Annotations
The points of the polyline are defined as a list of comma
separated x,y coordinates seperated by spaces like "x1,y1 x2,y2 x3,y3" e.g.
"0,0 1,2 3,5"
Type xsd:string
Properties
use required
Used by
Element Polyline
Source
<xsd:attribute name="Points" use="required" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>The points of the polyline are defined as a list of comma separated x,y coordinates seperated by spaces like "x1,y1 x2,y2 x3,y3" e.g. "0,0 1,2 3,5"</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Polyline / @MarkerStart
Namespace No namespace
Type Marker
Properties
use optional
Facets
enumeration Arrow
Used by
Element Polyline
Source
<xsd:attribute name="MarkerStart" use="optional" type="Marker"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Polyline / @MarkerEnd
Namespace No namespace
Type Marker
Properties
use optional
Facets
enumeration Arrow
Used by
Element Polyline
Source
<xsd:attribute name="MarkerEnd" use="optional" type="Marker"/>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Polygon / @Points
Namespace No namespace
Annotations
The points of the Polygon are defined as a list of comma
separated x,y coordinates seperated by spaces like "x1,y1 x2,y2 x3,y3" e.g.
"0,0 1,2 3,5"
Type xsd:string
Properties
use required
Used by
Element Polygon
Source
<xsd:attribute name="Points" use="required" type="xsd:string">
  <xsd:annotation>
    <xsd:documentation>The points of the Polygon are defined as a list of comma separated x,y coordinates seperated by spaces like "x1,y1 x2,y2 x3,y3" e.g. "0,0 1,2 3,5"</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Label / @X
Namespace No namespace
Annotations
This defines the X coordinate of the current text position
of the first character in the string. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Label
Source
<xsd:attribute name="X" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>This defines the X coordinate of the current text position of the first character in the string. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd
Attribute Label / @Y
Namespace No namespace
Annotations
This defines the Y coordinate of the current text position
of the first character in the string. [units pixels]
Type xsd:float
Properties
use required
Used by
Element Label
Source
<xsd:attribute name="Y" use="required" type="xsd:float">
  <xsd:annotation>
    <xsd:documentation>This defines the Y coordinate of the current text position of the first character in the string. [units pixels]</xsd:documentation>
  </xsd:annotation>
</xsd:attribute>
Schema location http://www.openmicroscopy.org/Schemas/OME/2016-06/ome.xsd