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OME.tif add image analysis information

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Please note:
Historical discussions about the Bio-Formats library. Please look for and ask new questions at https://forum.image.sc/tags/bio-formats

If you are having trouble with image files, there is information about reporting bugs in the Bio-Formats documentation. Please send us the data and let us know what version of Bio-Formats you are using. For issues with your code, please provide a link to a public repository, ideally GitHub.

OME.tif add image analysis information

Postby MLB » Thu Jun 21, 2012 10:06 am

Hi,
We have developped an imageJ plugin where the user have to choise parameters :
size of the structurant element,
mediane, moyenne
alpha parameter. ...

How can we do to add this information into the OME.TIFF xml ?
I didn't find the the schme of xml.

Thank you for your answer.

Marie Laure
Client : OMERO.clients-Beta4.3.3.win
Server : OMERO.server-Beta-4.3.0
MLB
 
Posts: 43
Joined: Tue Mar 06, 2012 3:53 pm
Location: France, Toulouse

Re: OME.tif add image analysis information

Postby ajpatterson » Thu Jun 21, 2012 10:11 am

Hello Marie,

The OME schemas are located here:
https://www.openmicroscopy.org/Schemas/

There is also a link to full generated documentation.

Additional documentation about parts of the schemes can be found here:
https://www.openmicroscopy.org/site/sup ... le-formats

Hope this helps,

Andrew
--
Andrew Patterson
Software Developer, Open Microscopy Environment
Wellcome Trust Centre for Gene Regulation and Expression
University of Dundee
ajpatterson
 
Posts: 50
Joined: Fri May 01, 2009 11:18 am


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