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icegridnode not started

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Re: icegridnode not started

Postby gael.pawlak » Fri Oct 14, 2011 2:01 pm

not really ... sorry

Code: Select all
[omero@vbioimage-omero local]$
[omero@vbioimage-omero local]$ unset OMERO_HOME
[omero@vbioimage-omero local]$ cd /usr/local/omero/omero
[omero@vbioimage-omero omero]$ bin/omero admin start
No descriptor given. Using etc/grid/default.xml
Waiting on startup. Use CTRL-C to exit
.............................
Failed to startup some components after 5 minutes
Calling "stop" on remaining components
Server not running
[omero@vbioimage-omero omero]$
gael.pawlak
 
Posts: 11
Joined: Fri Oct 14, 2011 9:11 am

Re: icegridnode not started

Postby cxallan » Fri Oct 14, 2011 2:27 pm

Okay, and you still having nothing in any of the log files?
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Posts: 509
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Re: icegridnode not started

Postby gael.pawlak » Mon Oct 17, 2011 7:29 am

My log files are still empty, sorry :-(

Gael
gael.pawlak
 
Posts: 11
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Re: icegridnode not started

Postby cxallan » Mon Oct 17, 2011 2:38 pm

Okay, try and execute bin/omero admin start like this:

Code: Select all
dist/bin/omero --debug=debug admin start
...


Then paste the output here.
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Site Admin
 
Posts: 509
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Re: icegridnode not started

Postby gael.pawlak » Tue Oct 18, 2011 12:49 pm

omero has no dist directory, so I ran this

Code: Select all
[omero@vbioimage-omero omero]$ ls
bin   etc      lib       LICENSE.txt  OMERO4.3__0.sql  sql  var
docs  include  licenses  log          sessions         tmp
[omero@vbioimage-omero omero]$ bin/omero --debug=debug admin start
Returning popen: ['icegridnode', '--version']
Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
No descriptor given. Using etc/grid/default.xml
Executing: ['icegridnode', '--daemon', '--pidfile', '/usr/local/omero/omero/var/master/master.pid', '--nochdir', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg,/usr/local/omero/omero/etc/master.cfg', '--deploy', '/usr/local/omero/omero/etc/grid/default.xml']
Waiting on startup. Use CTRL-C to exit
Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
.
Failed to startup some components after 5 minutes
Calling "stop" on remaining components
Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'node ping master']
Server not running
[omero@vbioimage-omero omero]$

gael.pawlak
 
Posts: 11
Joined: Fri Oct 14, 2011 9:11 am

Re: icegridnode not started

Postby gael.pawlak » Tue Oct 18, 2011 12:52 pm

I launched diagnostics in debug mode and I have an error in stderr

Code: Select all
[omero@vbioimage-omero omero]$ bin/omero --debug=debug admin diagnostics

================================================================================
OMERO Diagnostics 4.3.2-8fc94b85-b2882
================================================================================
       
Commands:   java -version                  Returning popen: ['java', '-version']
1.6.0     (/usr/bin/java -- 2 others)
Commands:   python -V                      Returning popen: ['python', '-V']
2.6.6     (/usr/bin/python)
Commands:   icegridnode --version          Returning popen: ['icegridnode', '--version']
3.3.1     (/opt/Ice-3.3/bin/icegridnode)
Commands:   icegridadmin --version         Returning popen: ['icegridadmin', '--version']
3.3.1     (/opt/Ice-3.3/bin/icegridadmin)
Commands:   psql --version                 Returning popen: ['psql', '--version']
8.4.9     (/usr/local/PostgreSQL/8.4/bin/psql)

Server:     icegridnode                    Returning popen: ['icegridadmin', '--Ice.Config=/usr/local/omero/omero/etc/internal.cfg', '-e', 'server list']
not started

                Stdout:

                Stderr:
icegridadmin: could not contact the default locator:
Network.cpp:1220: Ice::ConnectionRefusedException:
connection refused: Connection refused

               

Log dir:    /usr/local/omero/omero/var/log exists

Log files:  Blitz-0.log                    n/a
Log files:  DropBox.log                    n/a
Log files:  FileServer.log                 n/a
Log files:  Indexer-0.log                  n/a
Log files:  MonitorServer.log              n/a
Log files:  OMEROweb.log                   9.0 KB        errors=15   warnings=0   
Log files:  Processor-0.log                n/a
Log files:  Tables-0.log                   n/a
Log files:  TestDropBox.log                n/a
Log files:  master.err                     0.0 KB       
Log files:  master.out                     0.0 KB       
Log files:  Total size                     0.01 MB

Error while parsing logs

Environment:OMERO_HOME=/usr/local/omero/omero
Environment:OMERO_NODE=(unset)             
Environment:OMERO_MASTER=(unset)           
Environment:PATH=/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/usr/java/jdk1.6.0_27/bin:/usr/java/jdk1.6.0_27/bin:/opt/Ice-3.3/bin:/usr/local/PostgreSQL/8.4/bin:/usr/local/omero/omero/bin:/usr/local/omero/bin
Environment:ICE_HOME=/opt/Ice-3.3         
Environment:LD_LIBRARY_PATH=/opt/Ice-3.3:/usr/share/java:/usr/lib:/usr/lib64
Environment:DYLD_LIBRARY_PATH=/opt/Ice-3.3:/usr/share/java:/usr/lib:/usr/lib64

OMERO data dir: '/mnt/omerodata/OMERO'   Exists? True   Is writable? True
OMERO.web status... DEVELOPMENT: You will have to check status by hand!
[omero@vbioimage-omero omero]$
gael.pawlak
 
Posts: 11
Joined: Fri Oct 14, 2011 9:11 am

Re: icegridnode not started

Postby cxallan » Tue Oct 18, 2011 1:01 pm

That error is expected as the server is not started. The next step would be to ensure that there are no icegridnode, glacier2router or OMERO Java processes already running. Then we'll probably have to execute the processes by hand to find out what is dieing where. I assume /usr/local is on local disk? It's not on a network filesystem?
cxallan
Site Admin
 
Posts: 509
Joined: Fri May 01, 2009 8:07 am

Re: icegridnode not started

Postby gael.pawlak » Tue Oct 18, 2011 1:15 pm

You'r right, /usr/local is on local disk.

I watched my list of process but I've not seen anything like ice/glacier/...
I post them

Code: Select all
[root@vbioimage-omero ~]# ps -ef
UID        PID  PPID  C STIME TTY          TIME CMD
root         1     0  0 Oct17 ?        00:00:01 /sbin/init
root         2     0  0 Oct17 ?        00:00:00 [kthreadd]
root         3     2  0 Oct17 ?        00:00:00 [migration/0]
root         4     2  0 Oct17 ?        00:00:00 [ksoftirqd/0]
root         5     2  0 Oct17 ?        00:00:00 [migration/0]
root         6     2  0 Oct17 ?        00:00:00 [watchdog/0]
root         7     2  0 Oct17 ?        00:00:00 [migration/1]
root         8     2  0 Oct17 ?        00:00:00 [migration/1]
root         9     2  0 Oct17 ?        00:00:00 [ksoftirqd/1]
root        10     2  0 Oct17 ?        00:00:00 [watchdog/1]
root        11     2  0 Oct17 ?        00:00:00 [events/0]
root        12     2  0 Oct17 ?        00:00:00 [events/1]
root        13     2  0 Oct17 ?        00:00:00 [cpuset]
root        14     2  0 Oct17 ?        00:00:00 [khelper]
root        15     2  0 Oct17 ?        00:00:00 [netns]
root        16     2  0 Oct17 ?        00:00:00 [async/mgr]
root        17     2  0 Oct17 ?        00:00:00 [pm]
root        18     2  0 Oct17 ?        00:00:00 [sync_supers]
root        19     2  0 Oct17 ?        00:00:00 [bdi-default]
root        20     2  0 Oct17 ?        00:00:00 [kintegrityd/0]
root        21     2  0 Oct17 ?        00:00:00 [kintegrityd/1]
root        22     2  0 Oct17 ?        00:00:00 [kblockd/0]
root        23     2  0 Oct17 ?        00:00:00 [kblockd/1]
root        24     2  0 Oct17 ?        00:00:00 [kacpid]
root        25     2  0 Oct17 ?        00:00:00 [kacpi_notify]
root        26     2  0 Oct17 ?        00:00:00 [kacpi_hotplug]
root        27     2  0 Oct17 ?        00:00:22 [ata/0]
root        28     2  0 Oct17 ?        00:00:00 [ata/1]
root        29     2  0 Oct17 ?        00:00:00 [ata_aux]
root        30     2  0 Oct17 ?        00:00:00 [ksuspend_usbd]
root        31     2  0 Oct17 ?        00:00:00 [khubd]
root        32     2  0 Oct17 ?        00:00:00 [kseriod]
root        33     2  0 Oct17 ?        00:00:00 [md/0]
root        34     2  0 Oct17 ?        00:00:00 [md/1]
root        35     2  0 Oct17 ?        00:00:00 [md_misc/0]
root        36     2  0 Oct17 ?        00:00:00 [md_misc/1]
root        37     2  0 Oct17 ?        00:00:00 [khungtaskd]
root        38     2  0 Oct17 ?        00:00:00 [kswapd0]
root        39     2  0 Oct17 ?        00:00:00 [ksmd]
root        40     2  0 Oct17 ?        00:00:00 [khugepaged]
root        41     2  0 Oct17 ?        00:00:00 [aio/0]
root        42     2  0 Oct17 ?        00:00:00 [aio/1]
root        43     2  0 Oct17 ?        00:00:00 [crypto/0]
root        44     2  0 Oct17 ?        00:00:00 [crypto/1]
root        49     2  0 Oct17 ?        00:00:00 [kthrotld/0]
root        50     2  0 Oct17 ?        00:00:00 [kthrotld/1]
root        51     2  0 Oct17 ?        00:00:00 [pciehpd]
root        53     2  0 Oct17 ?        00:00:00 [kpsmoused]
root        54     2  0 Oct17 ?        00:00:00 [usbhid_resumer]
root        85     2  0 Oct17 ?        00:00:00 [kstriped]
root       305     2  0 Oct17 ?        00:00:00 [scsi_eh_0]
root       306     2  0 Oct17 ?        00:00:10 [scsi_eh_1]
root       316     2  0 Oct17 ?        00:00:00 [scsi_eh_2]
root       317     2  0 Oct17 ?        00:00:00 [vmw_pvscsi_wq_2]
root       383     2  0 Oct17 ?        00:00:00 [kdmflush]
root       387     2  0 Oct17 ?        00:00:00 [kdmflush]
root       402     2  0 Oct17 ?        00:00:00 [jbd2/dm-0-8]
root       403     2  0 Oct17 ?        00:00:00 [ext4-dio-unwrit]
root       404     2  0 Oct17 ?        00:00:00 [ext4-dio-unwrit]
root       490     2  0 Oct17 ?        00:00:00 [flush-253:0]
root       492     1  0 Oct17 ?        00:00:00 /sbin/udevd -d
root       696     2  0 Oct17 ?        00:00:00 [vmmemctl]
root       884     2  0 Oct17 ?        00:00:00 [kdmflush]
root       925     2  0 Oct17 ?        00:00:00 [jbd2/sda1-8]
root       926     2  0 Oct17 ?        00:00:00 [ext4-dio-unwrit]
root       927     2  0 Oct17 ?        00:00:00 [ext4-dio-unwrit]
root       928     2  0 Oct17 ?        00:00:00 [jbd2/dm-2-8]
root       929     2  0 Oct17 ?        00:00:00 [ext4-dio-unwrit]
root       930     2  0 Oct17 ?        00:00:00 [ext4-dio-unwrit]
root      1019     2  0 Oct17 ?        00:00:00 [kauditd]
root      1233     1  0 Oct17 ?        00:00:00 /sbin/rsyslogd -c 4
root      1262     1  0 Oct17 ?        00:00:11 irqbalance
rpc       1280     1  0 Oct17 ?        00:00:00 rpcbind
dbus      1297     1  0 Oct17 ?        00:00:01 dbus-daemon --system
root      1308     1  0 Oct17 ?        00:00:00 NetworkManager --pid-file=/var/run/NetworkManager/NetworkManager.pid
root      1312     1  0 Oct17 ?        00:00:00 /usr/sbin/modem-manager
root      1321     1  0 Oct17 ?        00:00:00 /usr/sbin/wpa_supplicant -c /etc/wpa_supplicant/wpa_supplicant.conf -B -u -f
avahi     1323     1  0 Oct17 ?        00:00:00 avahi-daemon: running [vbioimage-omero.local]
avahi     1324  1323  0 Oct17 ?        00:00:00 avahi-daemon: chroot helper
rpcuser   1356     1  0 Oct17 ?        00:00:00 rpc.statd
root      1407     2  0 Oct17 ?        00:00:00 [rpciod/0]
root      1408     2  0 Oct17 ?        00:00:00 [rpciod/1]
root      1415     1  0 Oct17 ?        00:00:00 rpc.idmapd
root      1425     1  0 Oct17 ?        00:00:00 cupsd -C /etc/cups/cupsd.conf
root      1439     1  0 Oct17 ?        00:00:00 /usr/sbin/acpid
68        1448     1  0 Oct17 ?        00:00:00 hald
root      1449  1448  0 Oct17 ?        00:00:00 hald-runner
root      1490  1449  0 Oct17 ?        00:00:00 hald-addon-input: Listening on /dev/input/event0 /dev/input/event2
68        1496  1449  0 Oct17 ?        00:00:00 hald-addon-acpi: listening on acpid socket /var/run/acpid.socket
root      1513     1  0 Oct17 ?        00:00:00 automount --pid-file /var/run/autofs.pid
root      1532     1  0 Oct17 ?        00:00:00 /usr/sbin/sshd
ntp       1540     1  0 Oct17 ?        00:00:00 ntpd -u ntp:ntp -p /var/run/ntpd.pid -g
root      1622     1  0 Oct17 ?        00:00:00 /usr/libexec/postfix/master
postfix   1630  1622  0 Oct17 ?        00:00:00 qmgr -l -t fifo -u
postgres  1651     1  0 Oct17 ?        00:00:00 /usr/local/PostgreSQL/8.4/bin/postgres -D /var/db/pgsql/data
postgres  1656  1651  0 Oct17 ?        00:00:00 postgres: logger process                                   
postgres  1660  1651  0 Oct17 ?        00:00:00 postgres: writer process                                   
postgres  1661  1651  0 Oct17 ?        00:00:00 postgres: wal writer process                               
postgres  1662  1651  0 Oct17 ?        00:00:00 postgres: autovacuum launcher process                       
postgres  1663  1651  0 Oct17 ?        00:00:00 postgres: stats collector process                           
root      1671     1  0 Oct17 ?        00:00:00 crond
root      1682     1  0 Oct17 ?        00:00:00 /usr/sbin/atd
root      1703     1  0 Oct17 ?        00:00:00 /usr/sbin/gdm-binary -nodaemon
root      1708     1  0 Oct17 tty2     00:00:00 /sbin/mingetty /dev/tty2
root      1710     1  0 Oct17 tty3     00:00:00 /sbin/mingetty /dev/tty3
root      1713     1  0 Oct17 tty4     00:00:00 /sbin/mingetty /dev/tty4
root      1717     1  0 Oct17 tty5     00:00:00 /sbin/mingetty /dev/tty5
root      1720   492  0 Oct17 ?        00:00:00 /sbin/udevd -d
root      1721   492  0 Oct17 ?        00:00:00 /sbin/udevd -d
root      1724     1  0 Oct17 tty6     00:00:00 /sbin/mingetty /dev/tty6
root      1738  1703  0 Oct17 ?        00:00:00 /usr/libexec/gdm-simple-slave --display-id /org/gnome/DisplayManager/Display1
root      1740  1738  0 Oct17 tty1     00:00:13 /usr/bin/Xorg :0 -nr -verbose -auth /var/run/gdm/auth-for-gdm-gU9OTj/database
root      1755     1  0 Oct17 ?        00:00:00 /usr/sbin/console-kit-daemon --no-daemon
gdm       1825     1  0 Oct17 ?        00:00:00 /usr/bin/dbus-launch --exit-with-session
root      1831     1  0 Oct17 ?        00:00:00 /usr/libexec/devkit-power-daemon
root      1872     1  0 Oct17 ?        00:00:00 /usr/libexec/polkit-1/polkitd
rtkit     1883     1  0 Oct17 ?        00:00:00 /usr/libexec/rtkit-daemon
root      1912  1738  0 Oct17 ?        00:00:00 pam: gdm-password
sysadmin  1923     1  0 Oct17 ?        00:00:00 /usr/bin/gnome-keyring-daemon --daemonize --login
sysadmin  1932  1912  0 Oct17 ?        00:00:00 gnome-session
sysadmin  1941     1  0 Oct17 ?        00:00:00 dbus-launch --sh-syntax --exit-with-session
sysadmin  1942     1  0 Oct17 ?        00:00:00 /bin/dbus-daemon --fork --print-pid 5 --print-address 7 --session
sysadmin  2016     1  0 Oct17 ?        00:00:00 /usr/libexec/gconfd-2
sysadmin  2022     1  0 Oct17 ?        00:00:04 /usr/libexec/gnome-settings-daemon
sysadmin  2031     1  0 Oct17 ?        00:00:00 /usr/libexec/gvfsd
sysadmin  2040  1932  0 Oct17 ?        00:00:00 metacity
sysadmin  2043  1932  0 Oct17 ?        00:00:03 gnome-panel
sysadmin  2048     1  0 Oct17 ?        00:00:00 /usr/bin/pulseaudio --start --log-target=syslog
sysadmin  2049  2048  0 Oct17 ?        00:00:00 /usr/libexec/pulse/gconf-helper
sysadmin  2050  1932  0 Oct17 ?        00:01:15 nautilus
sysadmin  2053     1  0 Oct17 ?        00:00:00 /usr/libexec/bonobo-activation-server --ac-activate --ior-output-fd=18
sysadmin  2060     1  0 Oct17 ?        00:00:00 /usr/libexec/trashapplet --oaf-activate-iid=OAFIID:GNOME_Panel_TrashApplet_Fa
sysadmin  2061     1  0 Oct17 ?        00:00:00 /usr/libexec/wnck-applet --oaf-activate-iid=OAFIID:GNOME_Wncklet_Factory --oa
sysadmin  2063     1  0 Oct17 ?        00:00:00 /usr/libexec/gvfs-gdu-volume-monitor
sysadmin  2069     1  0 Oct17 ?        00:00:00 /usr/libexec/gvfsd-trash --spawner :1.7 /org/gtk/gvfs/exec_spaw/0
sysadmin  2071  1932  0 Oct17 ?        00:00:00 /usr/libexec/polkit-gnome-authentication-agent-1
sysadmin  2074  1932  0 Oct17 ?        00:00:00 python /usr/share/system-config-printer/applet.py
root      2076     1  0 Oct17 ?        00:00:00 /usr/libexec/udisks-daemon
sysadmin  2077  1932  0 Oct17 ?        00:00:00 gnome-volume-control-applet
sysadmin  2079  1932  0 Oct17 ?        00:00:00 nm-applet --sm-disable
sysadmin  2085  1932  0 Oct17 ?        00:00:00 /usr/sbin/restorecond -u
sysadmin  2088     1  0 Oct17 ?        00:00:00 /usr/libexec/im-settings-daemon
sysadmin  2090  1932  0 Oct17 ?        00:00:00 gnome-power-manager
sysadmin  2093  1932  0 Oct17 ?        00:00:00 gpk-update-icon
root      2101  2076  0 Oct17 ?        00:00:15 udisks-daemon: polling /dev/sr0
sysadmin  2139     1  0 Oct17 ?        00:00:03 gnome-screensaver
sysadmin  2257     1  0 Oct17 ?        00:00:00 /usr/libexec/gconf-im-settings-daemon
sysadmin  2264     1  0 Oct17 ?        00:00:00 /usr/libexec/gdm-user-switch-applet --oaf-activate-iid=OAFIID:GNOME_FastUserS
sysadmin  2265     1  0 Oct17 ?        00:00:01 /usr/libexec/clock-applet --oaf-activate-iid=OAFIID:GNOME_ClockApplet_Factory
sysadmin  2267     1  0 Oct17 ?        00:00:00 /usr/libexec/notification-area-applet --oaf-activate-iid=OAFIID:GNOME_Notific
sysadmin  2273     1  0 Oct17 ?        00:00:00 /usr/libexec/gvfsd-metadata
sysadmin  2282     1  0 Oct17 ?        00:00:01 gnome-terminal
sysadmin  2283  2282  0 Oct17 ?        00:00:00 gnome-pty-helper
sysadmin  2284  2282  0 Oct17 pts/0    00:00:00 bash
root      2298  2284  0 Oct17 pts/0    00:00:00 su -
root      2307  2298  0 Oct17 pts/0    00:00:00 -bash
sysadmin  2328  2282  0 Oct17 pts/1    00:00:00 bash
root      2341  2328  0 Oct17 pts/1    00:00:00 su - omero
omero     2349  2341  0 Oct17 pts/1    00:00:00 -bash
postfix   7112  1622  0 13:45 ?        00:00:00 pickup -l -t fifo -u
sysadmin  7443     1  1 15:05 ?        00:00:03 /usr/lib64/firefox-3.6/firefox
root      7492  2307  0 15:09 pts/0    00:00:00 ps -ef
[root@vbioimage-omero ~]#
gael.pawlak
 
Posts: 11
Joined: Fri Oct 14, 2011 9:11 am

Re: icegridnode not started

Postby jmoore » Thu Oct 20, 2011 3:15 pm

Could you perhaps try running:
Code: Select all
bin/omero admin startasync

and then list the processes via ps. "startasync" will return almost immediately, and will not kill any processes so we should be able to see what is running and what's going wrong. The output of "bin/omero admin diagnostics" after startasync would also be useful.

Cheers,
~Josh.
User avatar
jmoore
Site Admin
 
Posts: 1591
Joined: Fri May 22, 2009 1:29 pm
Location: Germany

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