Dundee: Will, Petr, Dominik, Mark, Jason, June,
Remote: Andreas, Wilma, J-m, Seb, Josh, David, Emil, Liza, Chris, Melissa
Start: 2:00 pm
(2-3 minutes each)
Data availability and archival updates.
Last release for this year.
Currently loading, rendering, annotating.
2 experiments to be completed this week for review when
Python3: table for demo (see below)
Post-demo (training + idr)
Recommended platforms: Ubuntu 18.04, CentOS 7
Some work on Debian, Ubuntu 16.0.4 but not recommended
Requirements page updated
Copy of documentation to be published
omero-py 5.6.0 released next week
Chris: installation process? Pip vs bundle?
Question of dropping Python from the bundle
(lib/python vs pip installed component)
Tests only covering Python 3.6
primarily for memory reasons
SA (learning/mail): N/A
Various WSI formats supported -> OME-TIFF
High-performance, multi-threaded, supports downsampling.
Can add more readers in future as needed
Preparing announcement - next week - 10 days
Could be used for pyramid generation in future - not tested
JRS: feedback from the road
appreciation of what is currently available. Lots of note taking around mapr, etc.
JRS: Also just a matter of working with the metadata.
Will: requires reading the manual which probably isn’t
(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)
(20-25 minutes plus 15 minutes questions max)
Josh: deployed with all plugins now ‘working’. Dev versions tagged.
‘Outreach’ DB on ome-training-4 (py3)
Following typical workshop workflow - all seems to be working.
OME-TIFF, jpeg, png) for single/multiple images.
Parade not working
Figure working - saving, reload, export as PDF working.
to fix this)
Jason - demo of idr-experimental (py3):
Thumbnails not loading on gallery front page.
Mapr results page thumbs loading OK
Filter results page thumbnails intermittant
Iviewer working OK (playing projected movie).
Mapr - Organism page - top level of tree not loading (too slow)?
Omero-web will be purely pip installable
2 will be pip install omero-py