2021-03-30
Attending: Will, Josh, Jason, Petr, Seb, Dom, Wilma, June, Chris, David, Jean-Marie, Melissa, Kevin, Erin,
Start: 2:00 pm UK
Project Status
(2-3 minutes each)
- IDR (Seb for Frances):
- Upcoming release in April
- includes long-standing compounds submission
- Looking at data transfer / access options: Globus
- NGFF
- Focus on nested storage: proj#16 (0.2)
- Various spec issues likely could use comments. (0.3, etc.)
- Axis names
- If e.g HCS comes first (0.3) need to adjust version numbers
- Few new, high-level feature discussions: OME-XML, reference index (0.4?)
- How to store files, e.g. OME-XML from BioFormats
- fsspec JSON spec for how to map to zarr-like data in a file
- Releases
- gallery, omero-insight and BioFormats done
- Ansible roles supporting OMERO installation on Ubuntu 20.04
- Working on migrating docs to ReadThedocs.
- To be tested on the contributing documentation first
- Seb: integrated ansible work from Steven Ogg
- Adding Ubuntu. Good with CentOS’ future.
- Glencoe - Chris:
- conversion tools - getting RCs out
- OME2021
- agenda taking shape
- Keynote
- 3 days of talks and discussions
- 4-5 talks per topic
- more lightning talks
- 1 day of demos, workshops
- workshops:
- main focus: preparing material for idr0094 (covid) story to expand our IDR focus portfolio. Working with submitters
- meeting tomorrow to discuss
- Community
- Karolinska (Dec 2021 - Feb 2022)
- happy with longer workshop - 2hrs
- can offer similar arrangement than this year but cannot block training server for a longer period (a month)
- alternative: have an “outreach-3” dedicated to this type of events but we have limited resources. Available but not public currently.
- run at institute
AOB
(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)
Main Topic
(20-25 minutes plus 15 minutes questions max)
