2022-08-02

Attending: Will, Petr, Frances, Josh, David Gault, Tom Boissonnet, Wilma, Mina, David Stirling, Kyle, Chris, Erin, Emil, Jason, Andreas, Muhanad, Kevin, Dom

Start: 2:00 pm UK

Accepting minutes from last meeting

Project Status

(2-3 minutes each)

• IDR (Frances):
  • release last week. Next prod in progress, big plant study
  • plan to release later this month
  • also to include search-engine with download-as-csv feature
• OMERO
  • Will: omero-figure / weblient: few PRs to come in releases soon
• Bio-Formats
  • David: 6.10.1 release planned - pushed to next week
  • Various TIFF regressions
• NGFF
  • Follow-up call to discuss Java x Zarr
  • v3 review ongoing. Changes to be made. Anymore?
  • ome-zarr-py release?
    • Will: clarify next steps on dask PR
  • Chris: C++ support (image.sc discussion)
• Glencoe
  • Chris: Discussions on rationising Zarr access across buckets, permissions, OMERO etc. e.g. labels and images in different locations.
  • Josh: create a ZEP for security/permissions?
  • sym-link support in Zarr could help
  • Erin: press release https://www.prnewswire.com/news-releases/bioimaging-data-in-the-cloud–ome-ngff-supported-in-omero-and-omero-plus-301597249.html
    • 2nd part to come on tooling
• GerBI
  • czi call for support
    • ISA-Tab for metadata
• Community
  • OME2022
    • meeting outline: doc in progress (virtual)
    • How to manage timezones etc?
    • 2nd or 3rd week of November
  • Japan workshop - 1 week trip next summer. Kobe + .. Josh?
  • TIM workshop: Cellpose notebook as analysis example

AOB

(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)

Main Topic

(20-25 minutes plus 15 minutes questions max)