2019-05-28

Dundee: Will, Jason, Petr, Mark, Riad, Dominik, Simon, June,

Remote: Sebastien, Frances, Josh, Jean-Marie, Chris, Melissa, Wilma, Liza, David, Andreas

Start: 2:00 pm

1. Accepting minutes from last meeting t

2. Project Status

(2-3 minutes each)

• Data-In (Ingest)

  • IDR

    • Metadata: re-annotation of all studies to feed into the UI

      • Will: release dates?

      • Seb: will initially add this for 10 most recent

    • Submissions: new set of 1000 HPA antibodies ready to go,

      looking into another submission including 3D ROIs & features

    • Next: increasing number of submissions requiring upgraded

      software OMERO 5.5/Bio-Formats 6. Scalability (rendering/thumbnail parallelization)

• Data-Out (UI/Search)

  • All repos up gateway have been tagged to 5.5.x (no more mXX)

    • Documentation in progress

    • Openmicroscopy 5.5.0-rc1 tested yesterday. One problem due

      to the fact it was deployed on eel (Python 2.6). Josh is working on latest-ci. Next release will be deployed on that server so no false negative

    • Java 11 regression noticed end of last week (5.4 works 5.5.

      server could not start). PR opened omero-server \#51 to fix the issue. Plan is to include it in 5.5 if no side-effect (no major problem expected)

    • Doc/website PR under review. Aim to have everything merged

      by end of the week

    • [5.5. Blog post

      draft</u>](https://docs.google.com/document/d/1ScOJZ4PkBS1tk8oX4htBW09-wJquyKUBovFzeUhUHT4/edit#)

      • Feedback welcome on statements about production quality

    • “Release” mode next week

    • New “latest-ci” setup similar to merge-ci

      • Petr: what data? Migrate

      • Josh: OK, but need more hands to help.

      • JM: Discuss tomorrow after standup?

  • Gallery (Will)

    • Some disagreement about the different results

    • Layout the search results for mapr terms in a table

    • Improve the understanding that they are different from study

      returns

• SysAdmin (learning/mail)

  • Mark: learning playbooks etc.

    • Simon: to allow access to VMware

  • Mail: Activity moved to image.sc forums.

    • Soon to block new posts. Then block comments on existing

      threads

    • More investigation to migrating forums into image.sc

    • Next to look at e-mail lists migration. Can’t START a new

      thread on image.sc via e-mail. Spam protection.

    • Petr: which lists moving? A: ome-devel and ome-users.

    • https://www.openmicroscopy.org/support/

      to get updated (PR open)

    • Jason: yet to decide schedule to disable posts, comments and

      migration.

  • Riad: Trello status?

    • Trying to reduce number of boards

    • Seb: closing old boards. Can’t create new board.

    • Created new internal Trello team for release boards.

    • Simon: use GitHub projects as a replacement?

      • Josh: yes, could work well.

• Glencoe

  • Various support issues: e.g. large in-place import performance.

    Sym-linking lots of files.

    • Improve transfer phase by 50%

    • Seb: use parallel file transfer (used for IDR)?

  • Microservices focus.

    • SSL in Java8 issues.

• Community

  • ELMI next week in Brno. Jason & Petr.

  • 5 delegates for day-3 of workshop.

    • Jason: need slack channel and space / desks in office.

    • Also: gdoc to collect requirements from users

  • Ola and Omar visiting - Thursday and Friday.

1. AOB

(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)

1. Main Topic

(20-25 minutes plus 15 minutes questions max)