8th Annual Users Meeting 2013

The 8th Annual OME Users Meeting was held at Institut Pasteur in Paris on June 24-25 2013.

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Day 1 — Monday 24th June, 2013

08:30 - 09:00

Registration & coffee

09:00 - 09:15

Welcome

Jason Swedlow & Spencer Shorte

09:15 - 09:30

Overview of OME/Update & Bio-Formats & OMERO

Jason Swedlow, University of Dundee

09:30 - 09:45

ImageJ & OME

Kevin Eliceiri, University Wisconsin-Madison

09:45 - 10:00

Tracking with OMERO

Sebastien Besson, Harvard Medical School

10:00 - 10:15

Project Update - Goldberg Lab

Ilya Goldberg, NIA Baltimore

10:15 - 10:30

OMERO.searcher

Ivan Cao-Berg, Carnegie Mellon University

10:30 - 11:00

Coffee & Refreshments

11:00 - 11:15

Fluorescence Lifetime Imaging (FLIM) & OMERO

Ian Munro, Imperial College London

11:15 - 11:30

Hierarchial Data, Tagging and Search

Douglas Russell, University of Oxford

11:30 - 11:45

Leading a horse to water, but will it drink?

Julien Jourde, Institut Pasteur

11:45 - 12:00

Extending OMERO to Support Non-image Data

Gianluigi Zanetti, CRS4, Sardinia

12:00 - 12:15

OMERO & Atlas Informatics

Bill Hill, MRC Edinburgh

12:15 - 13:00

Question & Answer Session

13:00 - 14:00

Group Photo & Lunch

14:00 - 14:30

The JCB DataViewer: Bringing New Dimensions to Published Image Data

Liz Williams, The Rockefeller University Press

14:30 - 15:00

The Knockout Mouse Project (KOMP): Phenotyping, and the Data Management Challenge

James Denegre, The Jackson Laboratory

15:00 - 15:30

Automated image analysis using OMERO scripts

Alex Herbert, University of Sussex

15:30 - 16:00

Coffee & Refreshments

16:00 - 16:30

The Original Data Repository and other OME/OMERO applications at the Stowers Institute

Winfried Wiegraebe, Stowers Institute

16:30 - 17:00

Towards open development of microscopy and image analysis applications with ZEN software and .czi file format by Carl Zeiss

Olaf Selchow & Markus Neumann, Carl Zeiss Microscopy GmbH

17:00 - 17:45

Question & Answer Session, Summary and Close

17:45 - 19:30

Drinks Reception & Poster Session


Day 2 — Tuesday 25th June, 2013

08:30 - 09:00

Coffee & Refreshments

09:00 - 09:15

Welcome

Jason Swedlow, University of Dundee

09:15 - 10:30

Workshops - Round 1

10:30 - 11:00

Coffee & Refreshments

11:15 - 12:45

Workshops - Round 2

12:15 - 13:30

Lunch

13:30 - 14:45

Workshops - Round 3

14:45 - 15:15

Coffee & Refreshments

15:15 - 16:30

Workshops - Round 4

16:30 - 17:00

Summary & Close

Jason Swedlow, University of Dundee


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