2018-04-10

Dundee: Dom, Kenny, Petr, June, Roger, Simon, Riad

Remote: Josh (notes), Chris, Melissa, Liza, Wilma, Emil, Stick

Start: 2:00 pm

1. Accepting minutes from last meeting

2. Project Status

(2-3 minutes each)

• West (Workflows)

  • Figure testing on-going See. [Testing

    information</u>](https://trello.com/c/B8KGhoz9/13-testing-information)

  • iviewer:

    • On-going work 1.0.0.

  • IDR/vae

    • https://idr-analysis.openmicroscopy.org/

    • Below.

  • infra/kubernetes

• East (infra/IDR 0.5.0)

  • prod50

    • Targeting end of April..

    • with OMERO 5.4.6 which is on Bio-Formats 5.8.2

    • As well as VAE (above)

    • Testing sheet forthcoming.

    • Pushing microservice changes to a follow-up release (see

      gitlab)

  • Speaking of which: Gitlab

    • Incubator: now public. Flexible permissions for rest.

    • Want to learn more? Josh happy to add accounts.

  • east-ci now reflecting tiffpyramid issues (and testing MATLAB on

    gitlab [not yet automated])

    • Now pointing at readers with problems, ETA green this week

    • Testing of matlab in gitlab now (UoD matlab license fun)

  • Selinux issues for upcoming OMERO 5.4.6 (as well as patching)

    • Downtime for various services upcoming, “regular” patching

• Glencoe - 14:09

  • Still on roughly the same track, trying to catch 5.4 bugs

  • cF. thread leakages due to numpy which has added noise to our

    counts

    • Unknown if particular actions or run-times lead to leaks

    • Trying to uninstall and/or set thread counts to 1

    • Likely nothing else to add to the existing PR.

    • Re: numpy & memofile invalidation – **document it in

      upgrade guys**

  • omero-cli-render 0.1.1 released today for inclusion. Also

    document it?

    • Could then be used a/synchronously on upgrade

  • omero-parade:

    • Had been planning on a quick presentation next Tuesday

    • May want to postpone; more status next week

  • Backburnering format issues

• Community

  • IDR 0.4.7

    • Petr/Dom: couple of PRs opened to be merged and then tagged.

  • Users’ Meeting

    • Registrations still coming in

    • Few weeks left before closing

    • May is holiday time.

    • More coming on the structure in the next couple of weeks.

1. AOB

(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)

• N/A

1. Main Topic

(20-25 minutes plus 15 minutes questions max)

• Recording presentation.

• Questions (see video for answers):

  • Where do/did delays come from?

  • How do you configure the wait?

  • Tara oceans example