Dundee: Petr, Mark, Simon, Dom, Jason, Riad, JM, June,
Remote: Seb, Josh, Andreas, Frances, Chris, David, Melissa
Start: 2:00 pm
(2-3 minutes each)
Jason: TB-scale Data Import
e.g. importing an IDR HPA dataset (several TB, 105-106 images) monopolises OMERO for 1-2 weeks.
queries to OMERO, or wanting to query and modify millions of objects.
limited unicode support)
Promoting digital pathology work including pyramid work
BF 6 Roadmap
Targeting rc1 with API freeze by end of the week.
new format doc
broken with latest Java release. Fix also added a new client dependency (guava) which wasn’t documented.
Decision: release a fix in 5.4.11 or wait for 5.5.0?
backported to the IDR branch.
release not critical, but everyone should take care before adding new imports to clients.
this happening in future.
5.5 Build (JM):
Server up and running before migration of config files.
required more work than expected. Trying to get the server running again as quickly as possible, but anticipate tests should already pass.
Still need to work on Ice 3.7.
before investigating further.
Remove closure is completed, PR to be merge
Test cleanup ongoing
David Egan has been highlighting OMERO, iviewer and IDR
Jason: IDR (OMERO.web) UI Updates
Several issues in IDR web:
Objects in left hand side
Updating Glencoe for 5.4.10
Microservices updated to support database sessions
Next iteration of microservices will communicate with
HCA: HDF call (Josh)
Plans for OMERO Users and DevOps Training Courses (Jason/June)
Mon 8 - Tue 9 April 0830-1800 (Dalhousie)
Mon 10 - Tuu 11 June 0830-1800 (Dalhousie)
2 x 2 day user workshops for 15-20 attendees
OMERO devops sessions, but what would it include?
Presentations vs tutorials vs interactive workshops vs
Petr: announcement of no classical mtg?
Petr/JM: Visiting Singapore in March 2019
(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)
(20-25 minutes plus 15 minutes questions max)