Dundee: Petr, J-m, Jason, Simon, Riad, Dom, Mark, June,
Remote: Josh, Will, Frances, Wilma, Andreas, David, Melissa
Start: 2:00 pm
(2-3 minutes each)
Dom: More HPA EBI uploads
David: BF 6 release in progress, official release next Monday
ROI table pagination but it’s complicated with big images
https://idr.openmicroscopy.org/webclient/?show=project-503 for IDR ROI example
JM: Slow progress on ice 37:
Not all Java classes are generated
May not make internal 5.5 milestone
Mark: Slow progress on indexer issue.
Spring: manual session and transaction management, no use of services, so best considered a short-term workaround. Needs more work to properly index data as done by previous indexer but lower technical risk than finally figuring out Spring issue.
Josh: How much would it cost to move to ElasticSearch?
or do something better, JSON only, how would it be deployed and integrated? Needs investigation.
work ongoing. Something’s broken with 5.4.10.
Josh: Sysadmin fires
GPFS outage over weekend
Artifactory delete problems as usual
Outage caused by possible spidering of image downloads
Current workload may be untenable
so all processing has to be done remotely
Josh: Issues identified with imaging:
Ingest: 1000 file limit
Download: directories stripped
API: S3 access of “blobs”
Problems with lack of deduplication when downloading
General interest; dataset added over the weekend
Upgrade requires funding.
Dundee OMERO Workshops
Proposed dates for Users Training
Announcements & Registration (google form and website
(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)
(20-25 minutes plus 15 minutes questions max)