2020 OME Community Meeting

Open data, advanced imaging data applications, and more

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Day 1 - Tuesday, May 26

Exploring public data resources


Please Note

The schedule includes pre-recorded videos organised by topic followed by group discussions.
Please find time to watch the videos before the corresponding discussion on each topic.
All times are in UK - British Summer Time (GMT+1).

microscope and images and the world -
National/Transnational Public Image Data Resources
Video Talks for Discussion: National/Transnational Public Image Data Resources

The Image Data Resource: update and next steps
Sébastien Besson & Frances Wong, OME Dundee

SSBD:database and SSBD:repository for sharing quantitative biosystems dynamics data and bioimaging data
Shuichi Onami, RIKEN

BioImage Archive at EMBL-EBI
Ugis Sarkans, EMBL-EBI

Platforms to address image data challenges: Global BioImaging and EOSC-Life
Federica Paina & Frauke Leitner, EMBL



an institute -
Project/Institutional Resources
Video Talks for Discussion: Project/Institutional Resources

Leveraging OMERO Plus to map the human pancreas
JP Cartailler & Diane Saunders, Vanderbilt

AICS
Graham Johnson, Allen Institute of Cell Science

HTAN
Peter Sorger, Harvard Medical School

BIAFLOWS: A collaborative framework to reproducibly deploy and benchmark bioimage analysis workflows
Sebastien Tosi, IRB Barcelona

Human Protein Atlas
Emma Lundberg, SciLifeLab


11:00 - 13:00
Discussion: National/Transnational Public Image Data Resources

Moderator: Sébastien Besson

16:00 - 17:00
Keynote: A FAIR Odyssey

Helen Parkinson, EMBL-EBI

17:00 - 19:00
Discussion: Project/Institutional Resources

Moderator: Jason Swedlow

19:00 - TBD
Hangout

Details to follow soon.


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